mRNA_Ecto-sp13_S_contig121.1786.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig121.1786.1
Unique Name	mRNA_Ecto-sp13_S_contig121.1786.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI)

HSP 1 Score: 1452 bits (3760), Expect = 0.000e+0
Identity = 787/810 (97.16%), Postives = 792/810 (97.78%), Query Frame = 2

Query:   32 MRSNSLPMSSGTDGRPWWENSSSGSGVVEEEMEPEPYPPNLERGVKVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKVFPLSELTAVVAQGERSLSLSLGAKGLHLTLADRATKEYLWEHLRKMREQAREQAKASRITRAASIDMIGSASQDFKRPKGGRKSVQFQVPENEGLDSDTTDSPLPEFLSNPDVRFEVTPGDRDALRAALERLRDALKRATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSPXXXXXXXXXXXGSGGGGGAG-AVIXXXXXXXXXXXXXDQGRLGKQYGSGLPSLLACLKGLKRACTRLSEKHFFCYVGGFTELVSAAEKAWVAISKRSPPDVAAVDRVKAAIIEGTHLAEDHGGGTGDVPHSGARLVVRMVRGLLESDGERLKELSKRIATAARAPIVVGDVFQDEAAGELQLRYMASLDGAPLDKAARTHEKLRTLSELLAPFSCPETQEPVSQLTIEDTSALLWRAHDMLYARMDANVGRRGVFKSSVAPLLPPRRDLAPPPVLCPELPPHHLPRTAMQA-LAAGLLGRVSPWDPPMVITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKANRMGALAGRGAKQDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRLDDDECKLLLQRCSMIETVDWAALRDSEPVKSIIKLCRYGPHALVMVGTTLQGQGRSFSWDAARDSLAR 2455
            MRSNSLPMSSGTDGRPWWENSSSGSGVVEEEMEPEPYPPNLERGVKVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKVFPLSELTAVVAQGERSLSLSLGAKGLHLTLADRATKEYLWEHLRKMREQAREQAKASRITRAASIDMIGSASQDFKRPKGGRKSVQFQVPENEGLDSDTTDSPLPEFLSNPDVRFEVTPGDR ALRAALE+LRDALKRATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSPXXXXXXXXXXX          AVIXXXXXXXXXXXXXDQGRLGKQYGSGLPSLLACLKGLKRA TRLSE+HFFCYVGGFTELVSAAEKAWVAISKRSPPDVAAVDRVKAAIIEGTHLAEDHGGGTGDVPHSGARLVVRMVRGLLESDGERLKELSKRIATAARAPIVVGDVFQDEAAGELQLRYMASLDGAPLDKAARTHEKLRTLSELLAPFSCPETQEPVSQLTIEDTSALLWRAHDMLYARMDANVGRRGVFKSSV PLLPPRRDLAPPPVLCPELPPHHLPRTAMQ  +AAGLLGRVSPWDPPMVITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKANRM AL GRGAKQDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDR+DDDECKLLLQRCSMIETVDWAALRD+EPVKSIIKLCRYGPHALVMVGTTLQGQGRSFSWDA RDSLAR
Sbjct:    1 MRSNSLPMSSGTDGRPWWENSSSGSGVVEEEMEPEPYPPNLERGVKVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKVFPLSELTAVVAQGERSLSLSLGAKGLHLTLADRATKEYLWEHLRKMREQAREQAKASRITRAASIDMIGSASQDFKRPKGGRKSVQFQVPENEGLDSDTTDSPLPEFLSNPDVRFEVTPGDRAALRAALEQLRDALKRATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSPXXXXXXXXXXXXXXXXXXXXXAVIXXXXXXXXXXXXXDQGRLGKQYGSGLPSLLACLKGLKRAGTRLSERHFFCYVGGFTELVSAAEKAWVAISKRSPPDVAAVDRVKAAIIEGTHLAEDHGGGTGDVPHSGARLVVRMVRGLLESDGERLKELSKRIATAARAPIVVGDVFQDEAAGELQLRYMASLDGAPLDKAARTHEKLRTLSELLAPFSCPETQEPVSQLTIEDTSALLWRAHDMLYARMDANVGRRGVFKSSVVPLLPPRRDLAPPPVLCPELPPHHLPRTAMQERVAAGLLGRVSPWDPPMVITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKANRMAALTGRGAKQDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRMDDDECKLLLQRCSMIETVDWAALRDTEPVKSIIKLCRYGPHALVMVGTTLQGQGRSFSWDATRDSLAR 810

[Close]

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot
Match: A0A6H5LG27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG27_9PHAE)

HSP 1 Score: 893 bits (2308), Expect = 3.340e-298
Identity = 626/1259 (49.72%), Postives = 648/1259 (51.47%), Query Frame = 2

Query:   32 MRSNSLPMSSGTDGRPWWENSSSGSGVVEEEMEPEPYPPNLERGVKVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKVFPLSELTAVVAQGERSLSLSLGAKGLHLTLADRATKEYLWEHLRKMREQAREQAKASRITRAASIDMIGSASQDFK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPKGGRKSVQFQV------------------PENEGLDSDTTDSPLPEFLSNPDVRFEVTPGDRDALRAALERLRDALKRATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSPXXXXXXXXXXX------------------------------------GSGGGGG-----AGAVIXXXXXXXXXXXXXDQGRLGKQYGSGLPSLLACLKGLKRACTRLSEKHFFCYVGGFTELVSAAEKAWVAISKRSPPDVAAVDRVKAAIIEGTHLAEDHGGGTGDVPHSGARLVVRMVRGLLESDGERLKELSKRIATAARAPIVVGDVFQDEAAGELQLRYMASLDGAPLDKAARTHEKLRTLSELLAPFSCPETQEPVSQLTIEDTSALLWRAHDMLYARMDANVGRRGVFKSSVAPLLPPRRDLAPPPVLCPELPPHHLPRTAMQALAAGL-LGRVSPW-DPPMVITGPPGAGKTVLSSAVARRSDV--RRHFRDGIFWLPAG---KDATERLPWLLEYLAVQLSLVLSSGQAGESKANRMGALAGRGAKQDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRLDDDECKLLLQRCSMIETVDWAALRDSEPVKSI 2347
            MRSNSLPMSSGTDGRPWWENSSSGSGVVEEEMEPEPYPPNLERGVKVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSK+FPLSELTAVVAQGERSLSLSLGAKGLHLTLADRATKEYLWEHLRKMREQAREQAKASRITRAASIDMIGSASQD K                                                                                                                                                                                                                                                                                                                                                                                                                                     RPKGGRKSVQFQV                  PENEGLDSDTTDSPLPEFLSNPDVRFEV PGDR ALRAALERLRDALK+ATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSP        XXX                                    G G G G      G   XXXXXXXX     +  R      +G+P      +G +    +   +          ELVSAAEKAWVAISKRSPPD AAVDRVKAAIIEGTHLAEDHGGGTGDVPHSGARLVVRMVRGLLESDGERLKELSKRIATAARAPIVVGDVFQDEAAGELQLRYMASLDGAPLDKAARTHEKLRTLSELLAPFSCPETQEPVSQLTIEDTSALLWRAHDMLYARMDANVGRRGVFKSSVAPLLPPRRDLAPPPVLCPELPPHHLPRTAMQA A G    R S    PP    GPP   +     AV R      R     G ++L AG   +D    +   +   A   S VL  G   +S+ +       R A  DDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDR+D+DECKLLLQRCSMIE  DWAALRD+E  + I
Sbjct:    1 MRSNSLPMSSGTDGRPWWENSSSGSGVVEEEMEPEPYPPNLERGVKVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKIFPLSELTAVVAQGERSLSLSLGAKGLHLTLADRATKEYLWEHLRKMREQAREQAKASRITRAASIDMIGSASQDLKSKKKIGLFKRSQSYNDASRMPRGRSYNEEDDYDDDGDEDFLADIPPGDGRGGGLRAGGGRLAARGRKFLMRISTRTGSTSGNKRSRRDANDVGEDGGSGLXXXXXXMPNSPSPSGRRERGGSDEWSSGESLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSSAPXPYPLAPSAAPDGTPPSYSAASXXXXXXXXXXXPTPETEVAIVETSSRSVSVTPGDAHSGATSGAGAGGKPTSTLVGKDVLSTLRPVGMPPPALVAGGAVGGQSRSVTMVEPGKGGMEMNGGEFGGGGAGDGVXXXXXXXXMDVAGGAAAATALEARLMKKAATLPAMPRVSLLLPSNRPKGGRKSVQFQVGIMRCDRVVVQCTATAVVPENEGLDSDTTDSPLPEFLSNPDVRFEVAPGDRAALRAALERLRDALKQATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSPSGGTVSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDWGRGRGRGRRRNRGGRXXXXXXXXXXPGASREAVRERASVAAGVP------EGPQEGWHKAEREALLL----LRELVSAAEKAWVAISKRSPPDAAAVDRVKAAIIEGTHLAEDHGGGTGDVPHSGARLVVRMVRGLLESDGERLKELSKRIATAARAPIVVGDVFQDEAAGELQLRYMASLDGAPLDKAARTHEKLRTLSELLAPFSCPETQEPVSQLTIEDTSALLWRAHDMLYARMDANVGRRGVFKSSVAPLLPPRRDLAPPPVLCPELPPHHLPRTAMQARAGGGGAARASESVGPPHGNHGPPWCRE---DGAVIRGGQAFGRPATLQGRYFLAAGGEGRDGEAAVAARVLGRAAVASPVLRPGGGEQSQPHGSIGRPRRQAGADDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRMDEDECKLLLQRCSMIEMADWAALRDTEVPREI 1246

[Close]

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 3.570e-13
Identity = 76/270 (28.15%), Postives = 121/270 (44.81%), Query Frame = 2

Query: 1649 LPPHHLPRTAMQALAAGLLGRVSPWDP--PMVITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKANRMGALAGRGAKQDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTC----LLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRLDDDECKLLLQRCSMIETVDWAALRDSEPVKSIIKLCRYGPHALVMVGT--TLQGQG-RSFSWD 2431
            LP  ++ R A+Q +A GL   + P +P  P  + G  G GKT+L SAV R+S+VR HFR G+FW+  G+ A   L  LL+ LA ++S                                + P G   P   E    +  HLAT         L+V+DD+W+RE +D +  LG  V+VT   + ++    G      LG      D  +++  +LLL+      TV          +  ++ LC + P  L + G+   ++G+G  + +W+
Sbjct:   11 LPQSYVERAAVQEVADGL---IKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSA----------------------------APTDTPHGV--PHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGL---LELG------DMTEEEALELLLKTS---RTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWE 235

[Close]

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot
Match: A0A6H5KYL2_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYL2_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.420e-12
Identity = 74/231 (32.03%), Postives = 107/231 (46.32%), Query Frame = 2

Query: 1739 ITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQ-AGESKANRMGALA-GRGAKQDDEVEVELPWGTRGP---REGEVAAFLAAHLAT----RGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRLDDDECKLLLQRCSMIETVDWAALRDSEPVKSIIKLCRYGPHALVMVGTTLQ 2404
            I GP G+GKTVL++AV R + VRR F D +FWL AGK A  RL  +L+ LA  +   L+ G+ AG + ++ +   + G G    D          R P   R+ + A    A L       G  CL+VVDD+ +RE +D +   G  ++VT+  KGLL           +G+E      L  +  + L  R +         +   E    ++ LCR  P AL M G   Q
Sbjct: 1351 IGGPSGSGKTVLAAAVVRDATVRRRFGDRVFWLHAGKGADHRLVSVLQSLADTVYAWLTDGEHAGVASSSALPRRSVGSGGGGGDAGAALADPNLREPVRFRDQDQAVNYVADLCRGPLLAGFRCLVVVDDVHEREVVDALWKSGCQLLVTSPVKGLL---------QAVGAEATVARPLGMEVARQLATRAA-------GEVALCEEGGRLVDLCRGCPLALAMSGAITQ 1565

[Close]

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.970e-11
Identity = 77/271 (28.41%), Postives = 122/271 (45.02%), Query Frame = 2

Query: 1670 RTAMQALAAGLLGRVSPWDP--PMVITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKANRMGALAGRGAKQDDEVEVELPWGTRGPREG--EVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRLDDDECKLLLQRCSMIETVDWAALRDSEPVKSI----IKLCRYGPHALVMVGT--TLQGQGRSF-SWDAARDSL 2449
            R A++ +A G+    +P +P  P  + G  G GK+VL+SAV R+S VR HFR GIFWL  G+ A +RL            L L  G  G+     MGA              + P G     +   +V   L A  +T     L+V+DD+W+RE +D +  LGF V+VT   + ++           LG      D  +++  +LLL+    +        R  + V+++    + LC   P  L + G+   ++G+G +  +W    D L
Sbjct:  154 RAAVRKVADGI---TNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRL------------LPLLQGLTGD-----MGA-----------APTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRC---LELG------DMTEEEALELLLKTSGTVG-------RPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDEL 377

[Close]

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot
Match: A0A6H5L982_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.030e-9
Identity = 66/217 (30.41%), Postives = 97/217 (44.70%), Query Frame = 2

Query: 1643 PELPPHHLPRTAM-QALAAGLLGRVSPWDPPMVITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKANRMGALAGRGAKQDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRLDDDECKLLLQRCS 2290
            P LPP  + R+ + +A+A  L       D   V+ G PG GKTV +S+V R  +VRR F+DGIFW+  G+  T     LL+ LA  L+          + +NR   +        +  +VE            V + L   L    L CL+V+D++WDRE +      GF  +VT        T+  A +   L      VD L + E   LL++ S
Sbjct:  197 PALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGIPGGGKTVAASSVVRCENVRRSFKDGIFWVQVGQVGTGNPTALLKGLAEDLA---------HAPSNRPRTVP------HEFRDVE-----------HVVSHLVGVLEQGNLRCLVVLDNVWDREMVPLFLRTGFRCLVT--------TRDVAMVPRHLWGTCTPVDMLTEAEALELLKKAS 379

[Close]

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot
Match: A0A388K5P1_CHABU (NB-ARC domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K5P1_CHABU)

HSP 1 Score: 70.9 bits (172), Expect = 9.490e-9
Identity = 66/232 (28.45%), Postives = 106/232 (45.69%), Query Frame = 2

Query: 1739 ITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKANRMGALAGRGAKQDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRLDDDECKLLLQRCSMIETVDWAALRDSEPVK-SIIKLCRYGPHALVMVGTTLQGQGRSFSWD 2431
            + G  G GKT L+  +   +++RRHFRDG+FW+  G +     P          S++ S  Q            +GR  +  DE E              VAAF     A RG   L V+DD+W +ES++ + D+     +  +S+ L+ T + A + +  G  V  ++ L D++   LL R S     D    +   PV   + + C+  P AL ++G+ LQG GR+  W+
Sbjct:  351 VVGMGGIGKTTLAKLINNDNEIRRHFRDGVFWVVVGLEMHSSRP---------KSVLRSLYQK---------VTSGRDLRSGDEFE------------DSVAAF---RRAVRGKRMLFVLDDVWKKESVEWIHDV-----IETDSRVLI-TTRNAQVLSRPGVGVYNLNLLKDEDALQLLCRHSF---GDREVPKHLLPVVLDVCQECQGLPLALKVIGSFLQGMGRA-DWE 539

[Close]

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.610e-8
Identity = 78/274 (28.47%), Postives = 118/274 (43.07%), Query Frame = 2

Query: 1577 FKSSVAPLLPPRRD-LAPPPVLCPELPPHHLPRTAM-QALAAGLLGRVSPWDPPMVITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKANRMGALAGRGAKQDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRLDDDECKLLLQRCSMIETVDWAALRDSEPVKSIIKLCRYGPHALVMVG 2392
            F S     LPP+   +A  P    +LPP  + R  + +A+   L+      +   V+ G PG GKT+ + AV R  DVRR F+DGIFW+  G+  T     LL+ LA  L+       A   + + +           + V+VE              + L      R L CL+V+DD+WD + +      GFH +VT        T+  A +   L      V+ L + E   LL+  S       AA+  +E +K + K C + P  L +VG
Sbjct:  215 FYSDFRATLPPKTAYMARVPKNAKQLPPAFVERRDLFKAVVKDLVATDRATNAAHVLRGMPGGGKTIAAKAVVRCEDVRRSFKDGIFWVQVGQVGTGNPMALLQGLARDLA------HAPSHQPHTV---------PHEFVDVE-----------HAVSHLEGVRKERNLRCLVVLDDVWDAQIVPLFLCGGFHSLVT--------TRDLAVIPRDLQGVCTEVEMLTNAEALELLKNASRAT----AAIPTNEGLK-VAKDCGFLPLPLAIVG 449

[Close]

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 2.470e-7
Identity = 59/215 (27.44%), Postives = 94/215 (43.72%), Query Frame = 2

Query: 1565 RRGVFKSSVAPLLPP---RRDLAPPPVLCPELPPHHLPRTAMQALAAGLLGRVSPWDPPMVITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKANRMGALAGRGAKQDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQG 2200
            +R  F + +  +LPP   +R   P   L   LP  ++ R  +Q     L+       P M++ G  G GKTVL+SA+ R+S V  HFR GIFW+  G+ A + L   L+ LA ++    +    G                  D +E             +V   LAA ++      L+V+DD+W+RE +     +G  V+VT   + ++    G
Sbjct:  218 QRKAFSTMIRDVLPPTLPQRAAVPTGALA--LPRSYVERPGVQEAMGDLMDPEKALAPYMIV-GMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVF-------------DSLE-------------QVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGG 403

[Close]

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot
Match: A0A496V040_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A496V040_9GAMM)

HSP 1 Score: 62.0 bits (149), Expect = 3.800e-6
Identity = 68/273 (24.91%), Postives = 122/273 (44.69%), Query Frame = 2

Query: 1643 PELPPHHLPRTAM-QALAAGLLGRVSPWD-PPMVITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKANRMGALAGRGAKQDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFH--VMVTANSKGLLWTQQGAGLAATLGSEVVAVDRLDDDECKLLLQRCSMIETVDWAALRDSEPVKSIIKLCRYGPHALVMVGTTLQGQGRSFSWDAARDSL 2449
            PELP H +   ++   +   LL   +    PP+V+  P G GK+V+++A+AR +++R+ F +GIFW+  G DA        + LA Q++L  + G+                    D  +VE   GT+  RE       AA        CLL++DD+ D + +     +G H  +++T++   LL   Q   +    G E+    +L   + + +      ++  D  A      ++ ++  C Y P AL ++ +  + Q  S  W+A  + L
Sbjct:  148 PELPSHFVENASLFNEIKTRLLAEATDKQKPPLVLKAPSGMGKSVMATALARDTEIRQEFSEGIFWIRLGSDA--------DLLAYQVTLFHALGET-----------------TTDIFDVEE--GTKRLRE-----LFAAR------ACLLILDDVLDAQDVLAFNIVGEHCQLLITSSDSNLLDIIQYF-ITTAKGYEI----KLFTTKKQAVEFFLECVDREDVTASSVPIDLEKLVHACGYLPLALQLMASVARSQPLS-EWEALLERL 376

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig121.1786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
D8LRB0_ECTSI	0.000e+0	97.16	NB-ARC and TPR repeat-containig protein n=1 Tax=Ec...	[more]
A0A6H5LG27_9PHAE	3.340e-298	49.72	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5LJA6_9PHAE	3.570e-13	28.15	NB-ARC domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5KYL2_9PHAE	2.420e-12	32.03	NB-ARC domain-containing protein n=2 Tax=Ectocarpu...	[more]
A0A6H5KU94_9PHAE	3.970e-11	28.41	NB-ARC domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5L982_9PHAE	1.030e-9	30.41	NB-ARC domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A388K5P1_CHABU	9.490e-9	28.45	NB-ARC domain-containing protein n=1 Tax=Chara bra...	[more]
D8LL58_ECTSI	1.610e-8	28.47	NB-ARC and TPR repeat-containing protein n=1 Tax=E...	[more]
D8LPV9_ECTSI	2.470e-7	27.44	NB-ARC and TPR repeat-containig protein n=1 Tax=Ec...	[more]
A0A496V040_9GAMM	3.800e-6	24.91	Uncharacterized protein n=2 Tax=Gammaproteobacteri...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig121	contig	Ecto-sp13_S_contig121:24958..37566 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	1466.1
Seed ortholog evalue	0.0
Seed eggNOG ortholog	2880.D8LRB0
Model size	2458
KEGG ko	ko:K10407,ko:K19360
KEGG Pathway	ko05132,map05132
Hectar predicted targeting category	other localisation
Exons	16
EggNOG free text desc.	determination of stomach left/right asymmetry
EggNOG OGs	COG0457@1,KOG1840@2759
Cds size	2427
COG Functional cat.	C
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03019,ko03036,ko04812

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig121.1786.1	prot_Ecto-sp13_S_contig121.1786.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig121 24989..37566 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462643.134774-UTR-Ecto-sp13_S_contig121:24957..24988	1681462643.134774-UTR-Ecto-sp13_S_contig121:24957..24988	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig121 24958..24988 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig121:24958..37566+
coding sequence from alignment at Ecto-sp13_S_contig121:24958..37566+

protein sequence of mRNA_Ecto-sp13_S_contig121.1786.1

>prot_Ecto-sp13_S_contig121.1786.1 ID=prot_Ecto-sp13_S_contig121.1786.1|Name=mRNA_Ecto-sp13_S_contig121.1786.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=809bp
MRSNSLPMSSGTDGRPWWENSSSGSGVVEEEMEPEPYPPNLERGVKVRKR
SMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKVFPLSELTAVVAQGERS
LSLSLGAKGLHLTLADRATKEYLWEHLRKMREQAREQAKASRITRAASID
MIGSASQDFKRPKGGRKSVQFQVPENEGLDSDTTDSPLPEFLSNPDVRFE
VTPGDRDALRAALERLRDALKRATISSESSFTISRSAPGLMPTANAVALS
GMRMSRMSASSPSGGTVSGGVVTGSGGGGGAGAVIGGGADGGAGTGGGDQ
GRLGKQYGSGLPSLLACLKGLKRACTRLSEKHFFCYVGGFTELVSAAEKA
WVAISKRSPPDVAAVDRVKAAIIEGTHLAEDHGGGTGDVPHSGARLVVRM
VRGLLESDGERLKELSKRIATAARAPIVVGDVFQDEAAGELQLRYMASLD
GAPLDKAARTHEKLRTLSELLAPFSCPETQEPVSQLTIEDTSALLWRAHD
MLYARMDANVGRRGVFKSSVAPLLPPRRDLAPPPVLCPELPPHHLPRTAM
QALAAGLLGRVSPWDPPMVITGPPGAGKTVLSSAVARRSDVRRHFRDGIF
WLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKANRMGALAGRGAKQ
DDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQ
VRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRLDDDECKLLLQ
RCSMIETVDWAALRDSEPVKSIIKLCRYGPHALVMVGTTLQGQGRSFSWD
AARDSLAR*

mRNA from alignment at Ecto-sp13_S_contig121:24958..37566+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig121.1786.1 ID=mRNA_Ecto-sp13_S_contig121.1786.1|Name=mRNA_Ecto-sp13_S_contig121.1786.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12609bp|location=Sequence derived from alignment at Ecto-sp13_S_contig121:24958..37566+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCGGGGAACTTCATCCGTAGTAACAGCTTCATGCGGAGCAACAGCCTGC
CGATGTCTTCGGGGACGGACGGTCGTCCGTGGTGGGAGAATGTGAGTGAA
GTCAATTGACAAGAGAGGGAAAAGTTCACAGGATGTGGACATCACTTTTT
GAAGGGATTACATCCCCCCTGACATGGCGAGAAACGAGGGCGTGATGCGA
TAAAAGATCATGGTGCGGACATCTGGAGATAGCCTTTTGAAGCGATTACA
TCTCCTCTCGAGTGCCTAAAACGAGAACATGACGCTATACAATCTATGGT
GTGGATATGTGGGGATAGACCTTTGGAATGTCTGCTCTAACATGGCGAGA
GGCGAGAGCGTGATGCGGTAAGATCCGTAGTACGGACATGCAGAGATGGG
CCTTTTGAAGGGATCACATCTCTCCTGACATGGCGAGAAACGAGAGCGAA
ATGCGGTGCAATCCGTAGTACGGTCATGTGCAGATGACCTTTAGAAGGGA
CCATATCTCCCCCAACACCTGCTGAGGATAATTTTCTGTTGGAAGTTATA
TGACATCTCACCAATGCGATGTCAATGGAAACGGAACGGCAGACGCTGGG
GAGATGTAGCCCTTTTTTACACTGGTACATATGCTATCTCTCCGCAGAAA
GACGTTTGAGTTTATGTTGACGCGAAGAGTTGCAAGTGAGACGAGATAGA
GATATCGGAGAGGAACACGAGCAGTAGAAAATGTAAACCTTGCTTTTTCG
CGCAGGCAGCCGGCCCAGAGGAAAAACGCACACACACAGCTATTTACAGA
GATCTGTGAGAGACAGGAAACAAGCTTGACGGCCATACATGTCATGTTGA
TGGCAATGCCATACATGTTATATCATGTGAAACCAAAACAAAGCACCGGT
ATGCAATCACTGCAACACATGTCATATCACATGAGCACGAAAACGAAGCT
GCGGTGTGCAGTCAATGCTATAAATGTCATATCATATGAACACGAAAACG
AAGCACCGGTATGCAATACAGCAGTAGGTTTCGCATGGCTAATTTTTCCG
GAAAGAGTTCTTGAGAGGAAAGAGATGGTGTGTATTTGTGTGGAAAGGCG
AAGCTGGTTTCCCACGTAGAATACCGCGTGCGGCGCTGAGGGTTTAGCAT
TAAAAAAGCGCATAACGGCATATGACAGTTTTTTTGGCGAAGTGACGTAG
GGAGAAAGCATGGGGGGCCGTGATGTAGTCGCACGAGGAAAAACGGGGGG
GGGGTCTTGCGCAAGAGGTTCATTCCGACCGCTTGAAAGAAGACACACGC
AGGTACAGTTAGAGAGAGTGTGAACCGAGGGCGGGGGCGAGGAATTTCCG
TTGCCGGCGGTCCGTTTCTCGTGCGGTTCGTTGCCTCTCGCCTTTCCTCG
TTAGGCGTATGTATGCATACATAACCTTTCGTCCCCCCCTCGTCTGAAAG
ATCGCGGTCGGCTCTGTTCCAAGTCAACGCTGTAGTTTTGTTCTTTTCAC
TCCCACTGACTTCCTCGTTTTTTTCGGCTCACCACGCTCGCGTGCCCCTA
CCAGAGCTCTTCGGGCTCCGGCGTGGTTGAAGAGGAGATGGAGCCGGAGC
CATATCCGCCGAATCTGGAGAGAGGGGTAAGAATGAGCGGCGCAGACAGA
GAAAGAGACAGCAACAGGCGGGGAGGGGGGGGGGGAGTCAGCCTTGTTGG
ACTGAATTTCGTGCCTGTTTGTTCCCGTTTATTTTGTCGATAAACGTTTT
CGAAATTTTATCGTTAACTGCTGTGGCTAGCACTCACATGGGATAATTCA
AAAGTGTACGAAACAGAGGCCCTGATATGACCCTGTCGTGGCTTGTTGGG
TTCATCGCTGTGGCTATACCCTCTCGGCGTCATCCGTTCAACGGCTACTG
CGCGAGTGTCTCTTCATGTATTTGTCCTCCCCCAAACCATTTTGTCTGAG
ATCCGGCCCTGCGAATTCCATGATGCCACCCGCACGCGGGCACCACGCAG
GTCAAGGTCCGCAAGCGCAGCATGGCCGGAAAGAGCGAGATCCGGAGGCT
GTACGTACGAGGGGATACGATCGAGCTGGTCAATCCGGAGAAGCGCATGT
TCCGCTCGCAGTCTAAGGTCTTCCCTCTGAGCGAGCTCACAGCGGTGAGC
AAATTCGGTGTTGTGCGATGAGAAGCGGCAGGACGACCAGAAGCCCCCGC
GTTCTGAGTTAGGCTGGCCTGTATGTTTTTAATTTTGTGTCCTTCAGTGT
ATGTATGAGTGCGCTTTGACAGTGCGGCGAGAATCGTCCGCACAGTTGTG
TGCATACCCTGTGAAGTAAGCAAGCAGGCTGCTCCCGTGTCAAGGTTAAG
GTTGCAACCACCCCCCCCGCGCGCGCGCGTTGGAAGAAGGCAACAGCTGC
CGCTGCGTACCACTCGTGCTGCTGCTGCACCTCCTCCTCCTCCGTTTGTT
TCTTTGGAAAGGCGACGACAACCACCATGATCGATCGCAACGCGCGCACC
CCACATCTACCCTCGGCCTCCAGCCACACTCTCGCCCTCTCGGAAGCGGA
TGCGTGTGCTAGTGCATACGTAGTCGATGATTTCAAGTTTATGGCGTTTT
TCACCAACCGTGCCCCCGCCCCCCGCGCGCGCGCCGGACCCGACCGGCGG
CGCCCCTCTCGCGGATTCAAACGGTGTTGAAACGAACGAACACCCTGTTC
AGGTTGTGGCTCAGGGCGAGCGCAGCTTATCGCTTTCCCTCGGGGCCAAG
GGCCTCCATCTTACTCTCGCCGACCGCGCCACGAAGGAGTACCTGTGGGA
GCACCTCCGAAAGATGCGGGAGCAAGCTAGGGAGCAGGCGAAGGCGTCCC
GCATCACGCGCGCAGCGAGCATCGACATGATCGGCAGCGCCTCGCAGGAC
TTCAAGAGGTGGGTGTCTTGGGTGGTTTTGTTTCGTTTTGATTCGATGCT
ACCTGTGGTGCCTTCCCAGTCCGCCACACGCTCCCGGTGCACGAGAGCAT
GTGGTCGGCCTGCGTGTCTTGTCGGTCTTGCTGTCCTCTCCGTCTGTTCA
GCCGTCCACCCCTCCTTCCGCATAAGCTCGAATATGCGCGTATAGAGAAG
AAGCGACCGCGACGCCGACGCCGACGAAGACGTGACTCTTGTCCTTTTCC
TCGTGGTTGGCAGAACATTGAACGCCGAAATTTCATCTAGGACGTGTAAA
GTTGCTCTCTGATGGGATGTTGGTGATGTTCATTTACTTGACGCCTGCAC
GTCACGCGAGCTCCCCCCCCCCCTCCACTCCCCGCCCTGCCCTGCCCTGC
CGAAGCAGCAAGAAGAAGATTGGGCTATTTAAGCGATCCCAGAGCTACAA
CGACGCGTCCCGGATGGCCCGGGGGCGGAGCTACAACGAGGACGACGACT
ACGACGACGACGGCGACGAAGATTTCCTCGCCGATCTTCCCCCTGGAGAT
GGCCGGGGGGGCGGGCTCAGGGCCGGCGGTGGCAGGCTCGCTGCCCGGGG
TCGGAAGTTCCTGATGCGCATCTCGACGCGCTCTGGCAGCACCTGTGAGA
GAGAGGGGGGGGGGGGATGTGCGGGGGTGTGGAAGGGGCGGCGTGGGGAT
GGGTTGGTAGTCAGTTGTGTGTGTGTGGTTGGAAGCAAGCCCGGCGGCCA
CGAAGAGTCCAGTTTTGTTTTGATGTAGACCGTGACAGGGTATGTGCGTA
TCAGGACTTTTGACCGGCTCAAGTGTTCTTAAAATGTAGTGTGTGGTGTT
TGTTCCCGATCCTATGCGTACCACCAATGATTGGCGAGCGACTTGTGTGT
CCGCGCGAGGTGCTTTGACTGATCTCTCGACTTGCGAAAACGTTTGTTGT
GTGTTTTCTGATCAATTTTAGCCGGGAACAAGAGAAGCCGTCGCGACGCG
AACGACGTGGGAGAGGACGGCGGTTCCGGTCTCGGCGGCGGAGGGGTAGG
TATGGCGGGGTCCCCCTCGCCCTCCGGGCGGCGGGAGCGCGGCGGCTCGG
ACGAGTGGTCCAGCGGGGAATCCCTGGAAGAAGGAGACGACGACGACGAC
GACGACGACGACGACGACGACGACGTCGACGACGGTAGCGAGGATGGCGA
AGATGACGACAGCGAGGAAGATGGCGAGCTCACGGAGGAAGATGAGGAGG
AGGACGACGAGAGCGACATTGATGACGACGACGACGACGGGGTGTCAGAG
GACAATTCGGACAGCGGCGGCGGCGGCGGCGGCCGCAAGGCCGAGGACCA
CCACCACACCCAGCAGGACGAGCTGCGGCAGCAGCTGAGGAAGGAAGCGA
TGGCGGCGGGCGAGGAGGGCGGCAGCGAGGAGACCTCTCCGGAGACGACG
GTCCGACCGTCCTCCGCGCCGCCCCCGTACCCGCTTGCCCCATCAGCGGC
AGCGGACGGCACGCCGCCTTCCTACTCGGCCGCCTCCGCCGCAGCGGCGT
CGTCGTCTTCGTCGTCATCGCCGACTCCAGAGACAGAGGTGGCCGTCATC
GAGACATCGTCCAGGAGCGTGAGCGTCACCACCGGAGACCCTCATTGCGG
TGCGACAAGCGGGGCGGGGGCGGGGGGGAAGCCGACAAGCACACTCGTCG
GGAAGGACGTGCTGTCCACGTTGAGACCCGTGGGGATGCCGCCGCCGGCG
CTCGTGGCGGGGGCGGCGGCAGGGGGGCAGTCGCGGTCGGTGACTATGGC
GGAGCCGGGCAGGGGCGGGGTGGAGATGAACGGAGACGAGTTCGGGGGGG
GCGGCGGCGGAGTTGGGGGAGGGGGGGGCGCAGATGGCATAGACGTTGCG
AGGGGACCGGCGTCGGCGTCGGCGCTGGAGGCGCGGTCGATGAAGAAGGC
GGCCACGCTGCCGGCCATGCCGCGCGTTTCGCTGCTTCTGCCCTCCAACA
GGCCGAAGGGGGGCCGGAAATCTGTGCAGTTCCAGGTGGGGATCGTGCCG
TGTGATGTGGTGCAGTGTACCGCGACCGCGGTTGTACATACAAAAAAGCG
AATATGATCTAATCTCCCGAGTCTTGGTCTTGCTGGTGTGTGCGATGTCC
GTTGTTGGACGTGGTTGCGGTTGGCTTGGAGTCGAACTCGGGACTCGGCC
AACGCTCGAACGCGGCATGACTTCACACCAGCGCAGCAAAGTAGTTGCAC
GAAGCACACAATCGCGCACAAAACCTCATGCTGCGAAACGGAGGGGGTGA
GTGGTCCAGGGGATAGGTGGGGGTGTTAGTGATGGACGACGTTTTGCAGT
CCCACTTCTTGCCGTTGTGTCTTCGCACTGCAGGATTTTTCGGGAAGGAA
TGTATTTGTGCTTTTTGGTGCCCTGCTGTGGCTGTCGTTGTCCCTCATTC
TCGAAGACGAACGATATCTCACAACATAAAACAACAGCAACCAACAAAAC
AACAACCAATAACCGCAACGTAGCAACAACAACAACAACAACCAACAGGT
GCCGGAGAACGAGGGCCTCGACTCTGACACGACGGACTCGCCGCTCCCCG
AGTTCCTGTCCAACCCGGACGTCCGTTTCGAGGTCACCCCCGGGGACAGG
GACGCCCTGCGGGCGGCGCTGGAGCGGCTCCGCGACGCCCTCAAGCGGGC
GACGATCAGCTCAGAGAGCAGCTTCACCATCTCCAGGTCGGCGCCTGGCC
TCATGCCCACGGCCAACGCCGTAGCCCTGTCGGGCATGCGGATGTCTCGG
ATGTCGGCCTCCTCGCCAAGTGGTGGGACCGTCAGCGGGGGGGTCGTGAC
TGGGAGCGGGGGGGGCGGCGGCGCCGGTGCGGTAATCGGGGGGGGCGCGG
ATGGCGGGGCTGGGACGGGCGGGGGGGACCAGGGGCGTCTCGGGAAGCAG
TACGGCAGCGGGCTGCCGTCGCTGCTGGCGTGCCTGAAGGGGCTCAAGAG
GGCCTGCACGAGGCTGAGCGAGAAGCATTTCTTCTGCTACGTGGTGCGTT
GTTGCGTTGTTTCATGTTGGTCATTTCGTCGTTTCAGGTTGGTTGTTTCT
AGTTTTTGGTCGTCAGGCCGGACAACCACCGGATGTAGACGCACAGATTG
TGCGCGACGTGCTAATGCTCACTCACTCCGCCGATCACCCCTTCGCCTTG
CTACGGGTGTGGTTGCACATCGTGCTGACGCTGAACTTGCCTCGAACTGT
AACCGCATGATAAATGTGTTTTTGCTTTTTGTTTTCTAATGAACTTGTAA
ACAATCACAGGTACCCGTTCTTCTTTGTGCAATCACAGAAATATACCCGT
TCTTCTTTGTTCATCGCCCCTTGTTGAAGACGTGATAATAGTTCGGATTT
TTCACTCTGCGGTTCGGTTGGTGCGCGCGTTTATAGAGTGGTGCGCGTCA
AGAGTAGCCTCTGTGAGCCCTTGATGATGAACACGTGAATGTTGGAATGA
TTTCCCTGCGGCACGGTATGGTGTGGTCCTTTGCGTCAACGAGGAGCTTG
TCTCAGCCGCCATCCTTGTGGTTGAAGGTGTGAACGCAGCCATCATTTTC
GTTGTCGAACATACATAAACATGTAGACGCTCGCTCTATCGTGTCCGTAC
TTTCATAACTTCCTCTCGTGTGTGGTGGTGTGCACGCAGGGCGGCTTCAC
GGAGCTAGTGTCGGCGGCGGAGAAGGCTTGGGTGGCTATTTCCAAGCGCA
GCCCGCCGGATGTTGCAGCTGTCGATAGGGTGAAGGCCGCGGTGAGTGGG
GTCTACCATGTAGATGGTGATTGGGTTTGGCCATTTCTGGCTGTGGTGGT
TGCATGTGCCGCCTGTAAGTTGTCGTGGCGATATGCTTCGTGCAGCTTTC
TTGCATGTTTTTGTTTTTGACGTGGCATGCTTCACTGCAGGTGCTGTTGA
CGTGACTGACATGAAGAAAAAGTCGGGTGTTGTTTGGCTCTGTTTGTATG
GTTGACTGGCATCTATGTCATTAATACCTGCGTCGAGGGATTTCAATAAT
CTTGACCAAGCTCGGCGCAGCTTTTACCTGGAATCATCGTGTTCGGGATG
GGCGGCTTGACGTTATTTTCCAGAAGGTCGCCAAGACGGTGACGCGTGTT
GATGAACATTGTTGACCACCATGTGATCGGTCCTCCTGGGTGGCGGTCGT
ACGCATGGTAGTGTTTCAAATGAAACTGGGTTGTGGAATTGTCTGCGTGT
TGTCTAGCCGAGCAACACACACATACTGGCGCCCGTGTGTTTCAATTCCA
TTCCACGGTTATTTCATGGTGATTATTCCCCGACGTCAGATCATCGAGGG
AACTCACCTGGCAGAAGACCACGGTGGGGGCACGGGCGACGTCCCGCACT
CGGGGGCACGTCTCGTGGTCCGCATGGTGCGGGGCCTCTTGGAGAGCGAC
GGGGAGCGACTAAAGGTGAATGAACGGTCCGAGGAAAAGGATGTTAAAGA
TGAGATGTGTGCTCTCTTATCTTCTGTGTTTCTTGGGCTTTCGGGGCGGC
CGGTCGTGTCTGTTTAGGCAATGGTATGTCTCTTTTCGTCTGGGTTGGTG
GCGCATGTGCGACGGGACTAAGGATTGTCGCTGCGCACGATAAGGAATCC
ACCCACCACCTGCCCCCCCCCCCAGGTACTGTCCATCTCGAAAAGGAACC
TAGCGATGAAACCGTTCAAGACACACACAACGCAGCAGCCAACTTACCCC
CCCCCCCCTCCCCCCTCCCCTCCAGGAGCTGAGTAAGCGCATCGCGACGG
CGGCACGAGCGCCGATCGTCGTAGGGGACGTGTTCCAGGACGAGGCGGCG
GGGGAGCTGCAGCTGCGGTACATGGCTAGCCTCGACGGGGCCCCCCTGGA
CAAGGCCGCCAGGACTCACGAGAAGCTGCGCACGCTGAGCGAGCTGCTGG
CACCGTTCTCGTGCCCGGAGACTCAGGAGCCCGTCTCCCAGCTCACCATC
GAGGTAGGGTTTCCATTATGTGGAGAGGGGGAAACGAGGGGGGCAGGGGT
ACGCGGTATTGTGCATTCTGATGTTCTTTCGGCTTTTTTTGAGAGGCAAG
AGCTCGTCTCCGAGCTTACATCGAGGTGGGGTTTATGTGGGGGGGTCCTT
ATGTTTTGCAAGCCTTACTGTAGCGGTTTGGCCTTTGACCACGCGTCCTC
GCCTACAAGAGGGGGAGGTAGGGTACGCGCGATATTTTGCATTCCGGAAT
AGACCCTGGACCATTTTTTTTCGTGTGGAAGTGTTTGGGGGTTTGGGATG
TCACCCGTTGTTGCGATAGGGTTGATTGGGCGTGAATACAATAGCGTCGG
TGCCCTGTTTGTGATTCACCCTTGTCTTTTGGGGGGGAGGAGTCGATCTC
ACCAAGTCCAACCAGAGAAAAGGCGAGTAGACGCATGCGATGTCGGTACT
GCTGGTCGCTGTTGTAGTATATCGTATCGATGTGGACTGTCCGGTTTATT
CCTCTCTTCTCCCCGTCTCCAGCTCTGCTGGACCGAGCCGTTTTCCCGCC
TTAGGAGGGAATCGGTTTGTCACGCAGGGGAGATGTTCCGAGGCCGTGTG
ACCTTGTCTGTTGTAACTGCTGAGCGCAAAGATGTAAATCGTTGTTGCTC
ATGTGCACATTTCCTCACACTCTGTAAATGATGTGCGTGGGTGGTATGCC
CCCGTGTCGCAGGATACGTCTGCCCTTCTGTGGCGGGCGCACGACATGCT
TTACGCGAGGATGGACGCCAACGTCGGGCGGCGGGGGGTGTTCAAGTCCA
GCGTGGCCCCCCTGCTGCCCCCCCGGAGAGACTTGGCCCCCCCGCCGGTG
CTCTGCCCAGAGCTCCCGCCGCACCACCTGCCGCGAACGGCGATGCAGGC
ACGTTGCTGCTGAATTTTTTGTGGCCTTCCTACAAATCTCGCGTATGTGG
GACTGTTCTTGCATCGTGCAGTAGAGCATTTGTACCACGGATAAAAATAA
CGGCGTTTAAGACGGTCATGACGAATATTCTCGGCTTTTGGTCGATTAAA
TTGCTCTGCTTTTGTTGCTGGTTCTGAAACCTTTCACGCGCCTGATTCGT
GTACTAAAATCCACACACACACTGCTGTCTTGTTCAGGAGCGAGTGGCGG
CGGGGCTGCTCGGGCGAGTGAGTCCGTGGGACCCCCCCATGGTAATCACG
GGTCCCCCTGGTGCCGGGAAGACGGTGCTGTCCTCCGCGGTGGCCAGGCG
TTCGGACGTCCGGCGACACTTCAGGTGTGTTGCGCTTGTTGTTGTTGTTG
TCGTTGTTTGTCTTCGCAAGTTTATTCCCTTCTGGACCCCTTTGCTTCCA
AGCTGCTTCCTTCCTCCACCACTAAATAGTGTGACACGGTGTATGTAGCA
TGGAATCTTTTTCACAAAGTTGAAACACACGGCCGCATCACTCCCGCCCT
TTATGCGGGACGGCGTTGTGTGCCTGTTACTTCTTTACCCTGGTGATAAG
GCCCTTGCTGTAGCATAAATTCTTTTTGACAACTCGCTCGAAACACCCCG
ACCGCGCCACTCCATCATGTGTGCAAAGGACGACATTTTTTGGCTGCTTC
CTCTCGACCCTAGCGATCAGGCGTAGCGTGTTATTTGTTGAATATCTCAA
ACCACACACCGCCTGGTGTATATATCACTCCGTCCAACATGCAGGGACGG
TATATTTCTCGCTGCTGCTTCCCTACCTACCCCATTTAGCGATGAGGCGT
AGCGTGAGACGCTTTTTCAACAGTTGCTTACACACCGACCGCTGTACACA
ATTTACCTCTCCGTAGGGACGGTATTTTCTGGCTGCCGGCGGGGAAGGAC
GCGACGGAGAGGCTGCCGTGGCTGCTCGAGTACTTGGCCGTGCAGCTGTC
GCTAGTACTGTCCTCCGGCCAGGCGGGGGAGAGCAAGGCCAACCGCATGG
GAGCATTGGCCGGCCGCGGCGCCAAGCAGGTGCCGTACCGTGTGTAACGC
CTCCTTCTATTTGTGTATGCGTCAGTCCCCGTTTTGTGTTATGTACGTGG
TTTGCTTTTTTTGGAGGGAGGCGGGATTTGTGAATGGAAAAAGAAGGTTT
TCCAGCGTGCGTGATGGTGATGATGGCGATGATTGCGATGATTGCGGGTA
CGCCGATTTTGATTATGTGGTGATGTTATCTGGAAGTTTTTGCGGCGTGC
GAGATATGATATGATGGTTGAGGTGATGATGGGCGCCTCCCTTTGATGGT
CCTTGTGTGGTGGTAACGAAATGTTGTCCGCGACGGTGGGGCTGCATTCA
GGCCAGCGATACATATGTGGTATACTGCTGTATGTAGTCAGAATCGTAGC
CCCCCCCCATACACTCACACACAAACGGGGGAGACACGCGCATGTCGTGG
AGGAGATGAGCAACAAACAGGAGCAGGTCTGTTGCGGCACCACTTCGACA
TGCTCCTTCCTCCATTGGTAGCCTGCGTTTTCCATCCCACATTTTTACCC
TGAGCCTCCTCGGATTTGGTGCTCTTTCGTCTCGCCCACTGTTCCATCGA
TTTGTTGCTGTAGCCCCCCCTCCCCCCCTGTTTGATCCCCCTCCCCCATT
CCCCGCGTGTGCGTAACGCAGGATGACGAGGTGGAGGTGGAACTCCCGTG
GGGCACGCGCGGGCCGCGGGAAGGGGAAGTAGCCGCTTTCCTGGCGGCGC
ACTTGGCGACCAGGGGGTTGACCTGTCTGCTCGTCGTCGACGACCTGTGG
GATAGGTGAGTCGTGGTTGCTGTCGTCGATGGTATTGGTGGTGTGGTGGG
GGGTGGTTGTGTTGCTGTTGCTGTTGCTGTTGTTGTTGTTGGTGGTGGTG
GTGGTGGTATTGTGGTTGATGTCGGTGGTAGTGGTAGTGGTGGTGGTGGT
GTTCAATGTTGTTATTGTTGTCGTTGTTGTTGTTGTTCTTGGTGGTGGTG
GTGTTGCTGTTGTTTCGGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTA
GGTGGTGGTGGTATTGTTGTCGTTGTTGTTGTTGGTAGGTGGTGGTGGTG
GTTGTTGTGGCAGTAGTGGTGGTGGTTGTGATGGTGGTGATAGTGGTGGC
GGTGGTGGTTGTGGCAGCAGTGGTGGTGGTTGTGATGGTGGTGATAGTGG
TGGCGGTTGAGTTGTTGTTGAAGTGGTCGTTGATGACGTGGCTGGTGGTC
GTTGTTCTGTCGCTACTGGTGTTGCTGCTGGTGCTGCTGCTGTGGTCGTC
GTCTTCCTTACCGTTATTTGCTGACGTGCGTGATTTTCGTAAAATGCGGT
GTAGCGTGAGAGCCGTATCGTGCTGCATTGTAATGTTTTGCGTTAGGGAG
ATTCCAAGATCCTTTGGAGACCACACACGCGCACCTGGTGTCGTGGGATG
GTGCCCTGTGCTTGAAGCATTCCCTCTCACCCGTGTGTCCCGTTGGCATC
CACGCTGGGGTTCAACTGGCTTGATGTGCGGCCCTTGGCTGACAATTCCT
AATCTAGGTCTCTCTCCGTGCTCAGATGGGTGGACTTGTTGCCTACCCCC
TCCCCCTGACTGCAAAGGAGGAAGGAATGATTGGCCATCGGTGATGGGTC
CTGTGGGAGCAACGTTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAA
CAACCAACACACGCAAGACATGAGTACAACCCCTCCTGTTTTCTTTTCTG
TATTTCTTTTTTCCGTGACAGGGAGTCGCTTGATCAGGTCCGTGACCTCG
GTTTTCATGTGATGGTCACCGCGAACTCAAAGGGGCTTCTGTGGACGCAG
CAGGGCGCGGGGCTCGCGGCCACGCTCGGGTCGGAGGTGGTGGCTGTCGA
CAGGCTGGACGACGATGAGGTGAGCCACGAACCTCCTGGTCGTTGTTGTG
TTTGTTGTTGATGGTGGTTTGTAAATGTAGGTGGCATTTTTTTTTTGAAG
GCCCTCACTTGCGGTGTTTCTCACATCCACGGTGACCCAAAAATCTGTCT
GTATTACGGATGTCGTGGGCAGCCGACGCTTTGCCATCGTGGCGGAGGAC
CAACGTCCGGTTCAGCTTTCCTCTCGAGATTTGCTCCTTTTTTGATTGGT
TTTAGCGTTCGGGTTTCGACCATGCTGCAACAAGACTGTCTCCCAGTTTG
TCCATACACGTTTTCGTGCCTAGGTTGTACGTGTGTTGACTCCCCCCTCC
GCTCGCTGCCTCCCTACGCCGCGCCTTGCCTATTGCCGACCATTGCTGCT
GCTTGGTGTAGTGCAAGCTGCTGCTCCAGAGGTGCTCGATGATCGAAACG
GTGGACTGGGCTGCTTTGCGGGACTCAGAGGTGTGTTGGCAATGACCCAC
TCTCTTATGACCTGTTTTTGCCGGGGTTGCTGTGACGAAACTGTCGACAT
GAACGGCGGTATTTGAGCCTTCCCTGATTACGCCGTTTGTGCATACAAGG
GCGCGAAAAAGTAGTGATTTGATAGCACGAATCGAAATTGAACGGCGGAC
TTGTTCAAACAATTGGTCACCCGACCTCCTCTCACCAACTACCGTTTCCA
CTCCTTGTCCCCCTTACTCTTCGCCACCGACAGCCCGTGAAATCGATCAT
CAAGCTATGCCGGTACGGGCCGCATGCTCTCGTGATGGTAGGGACGACCC
TTCAGGGGCAGGGACGCTCGTTCTCGTGGGATGCGGCGAGAGATTCTCTT
GCAAGGTGA

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig121:24958..37566+

>mRNA_Ecto-sp13_S_contig121.1786.1 ID=mRNA_Ecto-sp13_S_contig121.1786.1|Name=mRNA_Ecto-sp13_S_contig121.1786.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2427bp|location=Sequence derived from alignment at Ecto-sp13_S_contig121:24958..37566+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGGAGCAACAGCCTGCCGATGTCTTCGGGGACGGACGGTCGTCCGTG
GTGGGAGAATAGCTCTTCGGGCTCCGGCGTGGTTGAAGAGGAGATGGAGC
CGGAGCCATATCCGCCGAATCTGGAGAGAGGGGTCAAGGTCCGCAAGCGC
AGCATGGCCGGAAAGAGCGAGATCCGGAGGCTGTACGTACGAGGGGATAC
GATCGAGCTGGTCAATCCGGAGAAGCGCATGTTCCGCTCGCAGTCTAAGG
TCTTCCCTCTGAGCGAGCTCACAGCGGTTGTGGCTCAGGGCGAGCGCAGC
TTATCGCTTTCCCTCGGGGCCAAGGGCCTCCATCTTACTCTCGCCGACCG
CGCCACGAAGGAGTACCTGTGGGAGCACCTCCGAAAGATGCGGGAGCAAG
CTAGGGAGCAGGCGAAGGCGTCCCGCATCACGCGCGCAGCGAGCATCGAC
ATGATCGGCAGCGCCTCGCAGGACTTCAAGAGGCCGAAGGGGGGCCGGAA
ATCTGTGCAGTTCCAGGTGCCGGAGAACGAGGGCCTCGACTCTGACACGA
CGGACTCGCCGCTCCCCGAGTTCCTGTCCAACCCGGACGTCCGTTTCGAG
GTCACCCCCGGGGACAGGGACGCCCTGCGGGCGGCGCTGGAGCGGCTCCG
CGACGCCCTCAAGCGGGCGACGATCAGCTCAGAGAGCAGCTTCACCATCT
CCAGGTCGGCGCCTGGCCTCATGCCCACGGCCAACGCCGTAGCCCTGTCG
GGCATGCGGATGTCTCGGATGTCGGCCTCCTCGCCAAGTGGTGGGACCGT
CAGCGGGGGGGTCGTGACTGGGAGCGGGGGGGGCGGCGGCGCCGGTGCGG
TAATCGGGGGGGGCGCGGATGGCGGGGCTGGGACGGGCGGGGGGGACCAG
GGGCGTCTCGGGAAGCAGTACGGCAGCGGGCTGCCGTCGCTGCTGGCGTG
CCTGAAGGGGCTCAAGAGGGCCTGCACGAGGCTGAGCGAGAAGCATTTCT
TCTGCTACGTGGGCGGCTTCACGGAGCTAGTGTCGGCGGCGGAGAAGGCT
TGGGTGGCTATTTCCAAGCGCAGCCCGCCGGATGTTGCAGCTGTCGATAG
GGTGAAGGCCGCGATCATCGAGGGAACTCACCTGGCAGAAGACCACGGTG
GGGGCACGGGCGACGTCCCGCACTCGGGGGCACGTCTCGTGGTCCGCATG
GTGCGGGGCCTCTTGGAGAGCGACGGGGAGCGACTAAAGGAGCTGAGTAA
GCGCATCGCGACGGCGGCACGAGCGCCGATCGTCGTAGGGGACGTGTTCC
AGGACGAGGCGGCGGGGGAGCTGCAGCTGCGGTACATGGCTAGCCTCGAC
GGGGCCCCCCTGGACAAGGCCGCCAGGACTCACGAGAAGCTGCGCACGCT
GAGCGAGCTGCTGGCACCGTTCTCGTGCCCGGAGACTCAGGAGCCCGTCT
CCCAGCTCACCATCGAGGATACGTCTGCCCTTCTGTGGCGGGCGCACGAC
ATGCTTTACGCGAGGATGGACGCCAACGTCGGGCGGCGGGGGGTGTTCAA
GTCCAGCGTGGCCCCCCTGCTGCCCCCCCGGAGAGACTTGGCCCCCCCGC
CGGTGCTCTGCCCAGAGCTCCCGCCGCACCACCTGCCGCGAACGGCGATG
CAGGCACTGGCGGCGGGGCTGCTCGGGCGAGTGAGTCCGTGGGACCCCCC
CATGGTAATCACGGGTCCCCCTGGTGCCGGGAAGACGGTGCTGTCCTCCG
CGGTGGCCAGGCGTTCGGACGTCCGGCGACACTTCAGGGACGGTATTTTC
TGGCTGCCGGCGGGGAAGGACGCGACGGAGAGGCTGCCGTGGCTGCTCGA
GTACTTGGCCGTGCAGCTGTCGCTAGTACTGTCCTCCGGCCAGGCGGGGG
AGAGCAAGGCCAACCGCATGGGAGCATTGGCCGGCCGCGGCGCCAAGCAG
GATGACGAGGTGGAGGTGGAACTCCCGTGGGGCACGCGCGGGCCGCGGGA
AGGGGAAGTAGCCGCTTTCCTGGCGGCGCACTTGGCGACCAGGGGGTTGA
CCTGTCTGCTCGTCGTCGACGACCTGTGGGATAGGGAGTCGCTTGATCAG
GTCCGTGACCTCGGTTTTCATGTGATGGTCACCGCGAACTCAAAGGGGCT
TCTGTGGACGCAGCAGGGCGCGGGGCTCGCGGCCACGCTCGGGTCGGAGG
TGGTGGCTGTCGACAGGCTGGACGACGATGAGTGCAAGCTGCTGCTCCAG
AGGTGCTCGATGATCGAAACGGTGGACTGGGCTGCTTTGCGGGACTCAGA
GCCCGTGAAATCGATCATCAAGCTATGCCGGTACGGGCCGCATGCTCTCG
TGATGGTAGGGACGACCCTTCAGGGGCAGGGACGCTCGTTCTCGTGGGAT
GCGGCGAGAGATTCTCTTGCAAGGTGA