prot_Ecto-sp13_S_contig68836.17856.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig68836.17856.1
Unique Nameprot_Ecto-sp13_S_contig68836.17856.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length94
Homology
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BLAST of mRNA_Ecto-sp13_S_contig68836.17856.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 2.040e-12
Identity = 34/43 (79.07%), Postives = 36/43 (83.72%), Query Frame = 0 
Query:    1 QGRYEEAEPLYERSQAISEKVLGREHPDVAISLNNRGLLLQTQ 43
            QG+Y EAEPLYERSQAI EKVLG EHPDVA SLNNR  LL+ Q
Sbjct:   18 QGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQ 60
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BLAST of mRNA_Ecto-sp13_S_contig68836.17856.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 6.510e-11
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0 
Query:    1 QGRYEEAEPLYERSQAISEKVLGREHPDVAISLNNRGLLLQTQ 43
            QG+Y EAEPLYERSQAI E VLG EHPDV  SLNNR LLL+ Q
Sbjct:  660 QGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEKQ 702
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BLAST of mRNA_Ecto-sp13_S_contig68836.17856.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 3.860e-9
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    1 QGRYEEAEPLYERSQAISEKVLGREHPDVAISLNNRGLLLQ 41
            QG+Y EAEPLYERS AI EKVLG EHPDVA SL+NR  LL+
Sbjct:  693 QGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLE 733
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BLAST of mRNA_Ecto-sp13_S_contig68836.17856.1 vs. uniprot
Match: A0A6H5JY23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY23_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.590e-9
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:    1 QGRYEEAEPLYERSQAISEKVLGREHPDVAISLNNRG 37
            QG Y +AEPLYE+SQAI EK LG+EH DVA SLNNRG
Sbjct:   88 QGEYTQAEPLYEKSQAIQEKFLGQEHSDVATSLNNRG 124
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BLAST of mRNA_Ecto-sp13_S_contig68836.17856.1 vs. uniprot
Match: A0A6H5K8Z8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z8_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.990e-9
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0 
Query:    1 QGRYEEAEPLYERSQAISEKVLGREHPDVAISLNNRGLL 39
            QG+Y++AE LYERS AI EKVLG EHPDVA SLNNR LL
Sbjct:   16 QGKYDDAEQLYERSLAIREKVLGPEHPDVAQSLNNRELL 54
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BLAST of mRNA_Ecto-sp13_S_contig68836.17856.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 5.030e-9
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 0 
Query:    1 QGRYEEAEPLYERSQAISEKVLGREHPDVAISLNNRGLLLQTQ 43
            QG+Y++AEPL ERSQ I EKVLG EHPDVA SLNNR  LL+ Q
Sbjct:  498 QGKYDDAEPLNERSQTIREKVLGPEHPDVAQSLNNRAGLLEAQ 540
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BLAST of mRNA_Ecto-sp13_S_contig68836.17856.1 vs. uniprot
Match: A0A6H5KMK1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK1_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 5.950e-9
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:    1 QGRYEEAEPLYERSQAISEKVLGREHPDVAISLNNRGLLLQTQ 43
            QG+Y EAEPLYERSQAI EKVLG EHP VA SLN+R  LL  Q
Sbjct:   14 QGKYTEAEPLYERSQAIREKVLGSEHPRVATSLNDRAKLLCKQ 56
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BLAST of mRNA_Ecto-sp13_S_contig68836.17856.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 7.170e-9
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 0 
Query:    1 QGRYEEAEPLYERSQAISEKVLGREHPDVAISLNNRGLL 39
            QG+YEEA PLYERS AI EKVLG +HPDVA SLNNR LL
Sbjct:  798 QGKYEEAGPLYERSLAIREKVLGPDHPDVAQSLNNRALL 836
[Close]
BLAST of mRNA_Ecto-sp13_S_contig68836.17856.1 vs. uniprot
Match: A0A6H5L226_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L226_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 2.390e-8
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    1 QGRYEEAEPLYERSQAISEKVLGREHPDVAISLNNRGLLLQ 41
            QG++ EAEPLYERSQAI EKVLG +HPDVA  LNNR  LL+
Sbjct:  366 QGKHAEAEPLYERSQAIREKVLGPKHPDVAEVLNNRATLLK 406
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BLAST of mRNA_Ecto-sp13_S_contig68836.17856.1 vs. uniprot
Match: A0A2W4QJT5_9GAMM (Uncharacterized protein n=1 Tax=Candidatus Methylumidiphilus alinenensis TaxID=2202197 RepID=A0A2W4QJT5_9GAMM)

HSP 1 Score: 56.2 bits (134), Expect = 2.460e-8
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0 
Query:    1 QGRYEEAEPLYERSQAISEKVLGREHPDVAISLNN 35
            QG+Y EAEPLY+ S AI+EK LG++HPDVA+SLNN
Sbjct:    8 QGKYAEAEPLYQSSLAIAEKALGKDHPDVAVSLNN 42
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig68836.17856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3K8_9PHAE2.040e-1279.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXS7_9PHAE6.510e-1176.74NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI3.860e-975.61NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5JY23_9PHAE4.590e-975.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8Z8_9PHAE4.990e-976.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIY6_9PHAE5.030e-972.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMK1_9PHAE5.950e-974.42Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JJK0_9PHAE7.170e-979.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L226_9PHAE2.390e-873.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2W4QJT5_9GAMM2.460e-871.43Uncharacterized protein n=1 Tax=Candidatus Methylu... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..87
e-value: 2.9E-32
score: 113.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..83
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..62
e-value: 4.4E-18
score: 65.4
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..79
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..63
score: 8.587

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig68836contigEcto-sp13_S_contig68836:148..630 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig68836.17856.1mRNA_Ecto-sp13_S_contig68836.17856.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig68836 148..630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig68836.17856.1 ID=prot_Ecto-sp13_S_contig68836.17856.1|Name=mRNA_Ecto-sp13_S_contig68836.17856.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp
QGRYEEAEPLYERSQAISEKVLGREHPDVAISLNNRGLLLQTQGRCEEAE
PLFERSQAISEKMLGPEHPGVATSLNNRAELLRVQVGAVRTFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom