prot_Ecto-sp13_S_contig6881.17855.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6881.17855.1
Unique Nameprot_Ecto-sp13_S_contig6881.17855.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
BLAST of mRNA_Ecto-sp13_S_contig6881.17855.1 vs. uniprot
Match: A0A6H5KVC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC7_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 1.410e-29
Identity = 58/75 (77.33%), Postives = 64/75 (85.33%), Query Frame = 0
Query:    1 MAQTDRKALVALYNATVGAKWKNARNWNTSAALSRWYGVEVNSQGRVVKLSLAGNNLQGEIPASLGQLAKLEQLY 75
            MAQ DR+ALVALYNAT GAKW+N RNWNT AALS+WYGVEV+SQGRVV LSLAGNNLQG IP  LGQL  L+ L+
Sbjct:   96 MAQPDREALVALYNATGGAKWENKRNWNTRAALSQWYGVEVDSQGRVVTLSLAGNNLQGTIPPELGQLTALQFLH 170          
BLAST of mRNA_Ecto-sp13_S_contig6881.17855.1 vs. uniprot
Match: D7G496_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G496_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 6.830e-29
Identity = 59/74 (79.73%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    1 MAQTDRKALVALYNATVGAKWKNARNWNTSAALSRWYGVEVNSQGRVVKLSLAGNNLQGEIPASLGQLAKLEQL 74
            MAQTDRKALVALYNAT G KWKN +NWNTSAALS+WY VEVNSQGRVVKLSL  NNLQG IP  +G+LA LE L
Sbjct:  125 MAQTDRKALVALYNATGGVKWKNNQNWNTSAALSQWYRVEVNSQGRVVKLSLWNNNLQGPIPVEVGRLAVLEYL 198          
BLAST of mRNA_Ecto-sp13_S_contig6881.17855.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 1.520e-27
Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 0
Query:    1 MAQTDRKALVALYNATVGAKWKNARNWNTSAALSRWYGVEVNSQGRVVKLSLAGNNLQGEIPASLGQLAKLE 72
            MAQTDRKALVALYNAT GA+WKN +NW TSAALS+W+GVEVN+QGRVVKLSL  NNL+G IP  LG L++LE
Sbjct:   71 MAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRGPIPKELGALSRLE 142          
BLAST of mRNA_Ecto-sp13_S_contig6881.17855.1 vs. uniprot
Match: D8LFJ9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ9_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.280e-26
Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    1 MAQTDRKALVALYNATVGAKWKNARNWNTSAALSRWYGVEVNSQGRVVKLSLAGNNLQGEIPASLGQLAKLEQLY 75
            MAQTDR+ALVALY A  GAKW+N RNWNTSAALS+W+GVEVNSQGRVV L L  NNLQG IP  LG L  L+ L+
Sbjct:   25 MAQTDREALVALYTAIGGAKWRNNRNWNTSAALSQWHGVEVNSQGRVVNLFLWDNNLQGRIPTELGNLHMLDTLW 99          
BLAST of mRNA_Ecto-sp13_S_contig6881.17855.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 2.400e-25
Identity = 49/73 (67.12%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    1 MAQTDRKALVALYNATVGAKWKNARNWNTSAALSRWYGVEVNSQGRVVKLSLAGNNLQGEIPASLGQLAKLEQ 73
            MAQTDR ALVALY AT G  W+ ++NW+T A L  W+GV+VN QGRVVKL L  NNL+GEIPA+LGQLA L+Q
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQ 73          
BLAST of mRNA_Ecto-sp13_S_contig6881.17855.1 vs. uniprot
Match: A0A6H5KDU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU0_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.190e-24
Identity = 49/59 (83.05%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    1 MAQTDRKALVALYNATVGAKWKNARNWNTSAALSRWYGVEVNSQGRVVKLSLAGNNLQG 59
            MAQ DRKALVALYNAT GAKW+N RNWNT AALS+WYGVEV+SQGRVV L L GNNLQG
Sbjct:  140 MAQPDRKALVALYNATGGAKWRNKRNWNTRAALSQWYGVEVDSQGRVVTLHLGGNNLQG 198          
BLAST of mRNA_Ecto-sp13_S_contig6881.17855.1 vs. uniprot
Match: A0A6H5KND6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KND6_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 5.670e-24
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0
Query:    1 MAQTDRKALVALYNATVGAKWKNARNWNTSAALSRWYGVEVNSQGRVVKLSLAGNNL 57
            MAQTDRKALVALYNAT  AKW+  RNWNTSAALS+W+GVEVN QGRVVKLSL GNNL
Sbjct:   53 MAQTDRKALVALYNATGRAKWEYTRNWNTSAALSQWHGVEVNCQGRVVKLSLGGNNL 109          
BLAST of mRNA_Ecto-sp13_S_contig6881.17855.1 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 4.730e-22
Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    1 MAQTDRKALVALYNATVGAKWKNARNWNTSAALSRWYGVEVNSQGRVVKLSLAGNNLQGEIPASLGQLAKLEQLY 75
            M QTDR ALVALY+A  G  WKN  NWN  A LS+W+G+ +N QGRVV++ LA NNLQG IP +LG L+KLE+L+
Sbjct:   51 MPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANNLQGSIPEALGALSKLERLW 125          
BLAST of mRNA_Ecto-sp13_S_contig6881.17855.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 6.090e-22
Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    1 MAQTDRKALVALYNATVGAKWKNARNWNTSAALSRWYGVEVNSQGRVVKLSLAGNNLQGEIPASLGQLAKLEQLY 75
            MAQTDR ALV LY AT G  W+  +NW+T A L  W+GV+VN QGRVVKL L  NNL+GEIPA+LG+L  L+QL+
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQLH 75          
BLAST of mRNA_Ecto-sp13_S_contig6881.17855.1 vs. uniprot
Match: D7FUH5_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH5_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.780e-21
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 0
Query:    1 MAQTDRKALVALYNATVGAKWKNARNWNTSAALSRWYGVEVNSQGRVVKLSLAGNNLQGEIPASLGQLAKLEQL 74
            MA TDR AL+AL+ AT GA+W+ + NW TS  L  WYGV+VN++GRVVKLSL  NNLQG +P  LG L  L+ L
Sbjct:    1 MASTDRNALIALFQATRGAEWRKSDNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLQGSLPPQLGNLGALQHL 74          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6881.17855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVC7_9PHAE1.410e-2977.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G496_ECTSI6.830e-2979.73Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LFK2_ECTSI1.520e-2776.39Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LFJ9_ECTSI1.280e-2672.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JK91_9PHAE2.400e-2567.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDU0_9PHAE2.190e-2483.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KND6_9PHAE5.670e-2484.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL09_ECTSI4.730e-2261.33Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LBY3_ECTSI6.090e-2262.67Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FUH5_ECTSI1.780e-2159.46Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..147
e-value: 4.8E-45
score: 155.8
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 48..105
e-value: 4.6E-9
score: 35.9
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 119..140
e-value: 0.064
score: 13.8
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 47..101
NoneNo IPR availablePANTHERPTHR27008:SF309coord: 55..146
coord: 47..101
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 55..146
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 4..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6881contigEcto-sp13_S_contig6881:3327..5260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6881.17855.1mRNA_Ecto-sp13_S_contig6881.17855.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6881 3327..5718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6881.17855.1 ID=prot_Ecto-sp13_S_contig6881.17855.1|Name=mRNA_Ecto-sp13_S_contig6881.17855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
MAQTDRKALVALYNATVGAKWKNARNWNTSAALSRWYGVEVNSQGRVVKL
SLAGNNLQGEIPASLGQLAKLEQLYLYQNKLSGPIPKELRALTKLTSLIL
SSNNLTGPIPLELGRLAVLEYLDLGGNDLTGSIPPELGKLAALRWLD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt