prot_Ecto-sp13_S_contig6880.17853.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6880.17853.1
Unique Nameprot_Ecto-sp13_S_contig6880.17853.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length224
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6880.17853.1 vs. uniprot
Match: D7G3G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G4_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 2.400e-145
Identity = 206/223 (92.38%), Postives = 211/223 (94.62%), Query Frame = 0 
Query:    1 MGSFFYPALSEKSLIAFVKEVVSPTEVGRAVKAIRLGRVDAKSFFWLMRGFTSTKATELLAERGVRYAGPRPASHTSTYTGSPFFSSGRGITNLLSSVSANGRVGDRFVLCFSDGVDACAQMITGCLVATGGSGDFRTGSGDHDDNTYHLGGSSPPPCSAIIFGESCERAGRPGGERDGINGAGARVLTVLDWVGVYGECSESLLCAWVYRGEAQANQVDAAP 223
            MGSFFYPALSE+SLIAFVKEVVSPTEVGRAVKAIRLGRVDAKSFFWL RGFTSTKATELLAERG RYAGPRPASHTS  TGSPFFSSG+GIT+LLSSVSANGRVGDRFVLCFSDGVDACAQMITGCLVAT GSGD  TGS  HDDNTYHLGGSSPPPCSAIIFGESCERAGRP GERDGINGAGARVL+VLDWV VYGECSESLLCAWVYRGEAQAN+ DAAP
Sbjct:    1 MGSFFYPALSERSLIAFVKEVVSPTEVGRAVKAIRLGRVDAKSFFWLTRGFTSTKATELLAERGGRYAGPRPASHTSACTGSPFFSSGQGITSLLSSVSANGRVGDRFVLCFSDGVDACAQMITGCLVATDGSGDCSTGSRYHDDNTYHLGGSSPPPCSAIIFGESCERAGRPAGERDGINGAGARVLSVLDWVSVYGECSESLLCAWVYRGEAQANEADAAP 223
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6880.17853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3G4_ECTSI2.400e-14592.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6880contigEcto-sp13_S_contig6880:2797..3992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6880.17853.1mRNA_Ecto-sp13_S_contig6880.17853.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6880 2797..4018 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6880.17853.1 ID=prot_Ecto-sp13_S_contig6880.17853.1|Name=mRNA_Ecto-sp13_S_contig6880.17853.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp
MGSFFYPALSEKSLIAFVKEVVSPTEVGRAVKAIRLGRVDAKSFFWLMRG
FTSTKATELLAERGVRYAGPRPASHTSTYTGSPFFSSGRGITNLLSSVSA
NGRVGDRFVLCFSDGVDACAQMITGCLVATGGSGDFRTGSGDHDDNTYHL
GGSSPPPCSAIIFGESCERAGRPGGERDGINGAGARVLTVLDWVGVYGEC
SESLLCAWVYRGEAQANQVDAAP*
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