prot_Ecto-sp13_S_contig6876.17846.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6876.17846.1
Unique Nameprot_Ecto-sp13_S_contig6876.17846.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length179
Homology
BLAST of mRNA_Ecto-sp13_S_contig6876.17846.1 vs. uniprot
Match: A0A6H5KRU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU9_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 3.500e-46
Identity = 116/179 (64.80%), Postives = 121/179 (67.60%), Query Frame = 0
Query:    1 VQQRIATLQDVLDESDGGFSAAPLRVEEEDFADASLQGKGGKGKQPARAPRMEDETADQXXXXXXXXXXXXXDYDAGGREEGDSEKEEGGVQQNEVRMVPWKYEALEKEVILQVVLERLGDRIYGKEFSCGKGYQYEQCYSRVAHYVKIELAKNKANMQTHGSLLKERFGRGEMNHLRD 179
            V+QRIATLQDVLDE DGG SAAPLR E  DFADASLQG+ GKGK+PARAPRMEDETA Q XXXXXXXXXXXX                GGVQQN+                             GKEFSCGKGYQYEQ YSRVA YVKIELAKNKA MQTHGSLL+ERFGR EM HLRD
Sbjct:  221 VKQRIATLQDVLDEPDGGSSAAPLRAEVGDFADASLQGRSGKGKRPARAPRMEDETAGQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVQQNK-----------------------------GKEFSCGKGYQYEQWYSRVAQYVKIELAKNKAYMQTHGSLLEERFGRAEMKHLRD 370          
BLAST of mRNA_Ecto-sp13_S_contig6876.17846.1 vs. uniprot
Match: D7FH42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH42_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 5.230e-36
Identity = 68/79 (86.08%), Postives = 71/79 (89.87%), Query Frame = 0
Query:  101 WKYEALEKEVILQVVLERLGDRIYGKEFSCGKGYQYEQCYSRVAHYVKIELAKNKANMQTHGSLLKERFGRGEMNHLRD 179
            WKYE +EKEVILQVVLERLGDRIYGKEFSCGKGY +EQ YSRVAHYVKIELAKNK  MQTHGSLL+ERF R EM HLRD
Sbjct:   66 WKYETVEKEVILQVVLERLGDRIYGKEFSCGKGYGHEQWYSRVAHYVKIELAKNKVYMQTHGSLLEERFARAEMQHLRD 144          
BLAST of mRNA_Ecto-sp13_S_contig6876.17846.1 vs. uniprot
Match: D7G1M7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M7_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 2.560e-23
Identity = 72/149 (48.32%), Postives = 80/149 (53.69%), Query Frame = 0
Query:   30 DFADASLQGKGGKGKQPARAPRMEDETADQXXXXXXXXXXXXXDYDAGGREEGDSEKEEGGVQQNEVRMVPWKYEALEKEVILQVVLERLGDRIYGKEFSCGKGYQYEQCYSRVAHYVKIELAKNKANMQTHGSLLKERFGRGEMNHLR 178
            D ADA+LQG  GKGKQPARAPRME+ETA Q                   R E    +  G        M  W   +            RL    +   F CGKGY YEQ YSRVAH+VKIELAKNK  M+THGSLL+ERFGR EM HLR
Sbjct:   44 DSADAALQG--GKGKQPARAPRMENETAGQDTLKRN-------------RVESSRTRSPGN-------MTRWSRRSS----------YRLSSSAWATGFICGKGYGYEQWYSRVAHHVKIELAKNKGYMKTHGSLLEERFGRAEMQHLR 160          
BLAST of mRNA_Ecto-sp13_S_contig6876.17846.1 vs. uniprot
Match: A0A6H5K6J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6J2_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.220e-17
Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0
Query:  125 GKEFSCGKGYQYEQCYSRVAHYVKIELAKNKANMQTHGSLLKERFGRGEMNHLRD 179
            GK+FSCGKGY +EQ YSRV H+VKI+LAKN  +MQTHGSLL ERFGR  M HLRD
Sbjct:    6 GKKFSCGKGYGHEQRYSRVVHHVKIQLAKNNTSMQTHGSLLNERFGRAGMKHLRD 60          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6876.17846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KRU9_9PHAE3.500e-4664.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH42_ECTSI5.230e-3686.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1M7_ECTSI2.560e-2348.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6J2_9PHAE2.220e-1774.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6876contigEcto-sp13_S_contig6876:1146..3677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6876.17846.1mRNA_Ecto-sp13_S_contig6876.17846.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6876 1146..3677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6876.17846.1 ID=prot_Ecto-sp13_S_contig6876.17846.1|Name=mRNA_Ecto-sp13_S_contig6876.17846.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp
VQQRIATLQDVLDESDGGFSAAPLRVEEEDFADASLQGKGGKGKQPARAP
RMEDETADQDEEEEEDEEEAEEDYDAGGREEGDSEKEEGGVQQNEVRMVP
WKYEALEKEVILQVVLERLGDRIYGKEFSCGKGYQYEQCYSRVAHYVKIE
LAKNKANMQTHGSLLKERFGRGEMNHLRD
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