prot_Ecto-sp13_S_contig68755.17845.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig68755.17845.1
Unique Nameprot_Ecto-sp13_S_contig68755.17845.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length95
Homology
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: D8LBN0_ECTSI (MEra, mitochondrial Era GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBN0_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 1.650e-48
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0
Query:    6 QVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERVIR 94
            +VSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKP LSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERV+R
Sbjct:   79 KVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPALSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERVLR 167          
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A7S3LCM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCM4_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 5.620e-10
Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    7 VSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGF--VSHEERDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLL 89
            VSAVS KRHTTR+  +G  TV  TQ+ F DTPGF  V   +++     L   +   IA VD +LL+VDA++++T     +L  L+
Sbjct:    1 VSAVSRKRHTTRQRIMGARTVQNTQLIFVDTPGFLKVDQAKKEGLDRNLVVTASAEIANVDFSLLVVDAARNLTDAYKETLVTLM 85          
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A7S3G4F9_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4F9_9EUKA)

HSP 1 Score: 52.8 bits (125), Expect = 6.730e-6
Identity = 30/76 (39.47%), Postives = 41/76 (53.95%), Query Frame = 0
Query:    6 QVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRG 81
            ++SAV+ K  TTRE  LGVMT G+ Q+ F DTPG V+          L A ++ +    DL   +VDA+K     G
Sbjct:  129 KLSAVTHKAQTTRERVLGVMTEGKCQIVFMDTPGVVTSAGETKQYRALFATAKSSAQEADLVAFVVDAAKKGKAEG 204          
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A6P7SXP4_OCTVU (GTPase Era, mitochondrial n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7SXP4_OCTVU)

HSP 1 Score: 52.8 bits (125), Expect = 6.750e-6
Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 0
Query:    5 YQVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEE--RDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRGL-RSLTGLL 89
            +++S+VS+K HTTR+NTLGV+T    Q+ F DTPG V+ +   +      +  +    I AVD+  ++VD S     R L +S+  LL
Sbjct:  144 WKMSSVSSKVHTTRKNTLGVLTENNNQIVFVDTPGLVTSKSFSKHSLDRNMITDPENCIQAVDMIGIIVDVSNRWYSRELGQSILQLL 231          
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A2G8KUI9_STIJA (Putative GTPase Era, mitochondrial n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KUI9_STIJA)

HSP 1 Score: 52.8 bits (125), Expect = 6.770e-6
Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = 0
Query:    2 VSRYQVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEE--RDDYKPTLSAESREAIAAVDLTLLLVDASKDVTK 79
            V + ++ +VS K HTTR    GV+T GR Q+ F DTPG V+H+   +      L  +++  +   DL  ++VDAS   T+
Sbjct:  119 VLKRRIFSVSRKVHTTRARATGVLTHGRNQIIFLDTPGIVNHKHGRKHQLPRPLLIDAKNVLEEADLVAVIVDASNKWTR 198          
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A368CBW5_9GAMM (GTPase Era n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A368CBW5_9GAMM)

HSP 1 Score: 52.0 bits (123), Expect = 1.140e-5
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0
Query:    6 QVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPTLSAESREAIAAVDLTLLLVDASK 75
            ++S  S K  TTR+  LGV TVG  Q+ F DTPG   HE +   K  ++  +  AIA VD+ L L+D +K
Sbjct:   33 KLSITSRKPQTTRQQVLGVKTVGADQMIFVDTPGLHRHEPKAINK-AMNRSATSAIADVDIVLFLIDRAK 101          
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: M1BI48_SOLTU (GTP-binding protein erg n=10 Tax=Solanaceae TaxID=4070 RepID=M1BI48_SOLTU)

HSP 1 Score: 52.0 bits (123), Expect = 1.240e-5
Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 0
Query:    6 QVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPTLSAESREAIAAVDL---TLLLVDASKDVTKRGLRSLTGLLERV 92
            +VSAVS K +TT    LGVMT G+TQ+ F DTPG +  +    YK  + A    A  ++DL    +++ DA + +TK   R +  L+ER+
Sbjct:  179 KVSAVSRKTNTTTHEVLGVMTKGKTQICFFDTPGLMLKKSGFPYKD-MKARIESAWRSIDLYDVLIVIFDAHRHLTKPDSR-VVRLIERM 266          
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: UPI00071E050B (GTPase Era, mitochondrial-like n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=UPI00071E050B)

HSP 1 Score: 51.2 bits (121), Expect = 2.280e-5
Identity = 32/88 (36.36%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    5 YQVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEE--RDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRGL-RSLTGLL 89
            +++S+VS+K HTTR+NTLGV+T    Q+ F DTPG V+ +   + +    +  +    I AV++  ++VD S     R L +S+  LL
Sbjct:  144 WKMSSVSSKVHTTRKNTLGVLTENSNQIVFVDTPGLVTSKSFSKHNIDRNMITDPENCIQAVNMIGIIVDVSNKWHSRELGQSILQLL 231          
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A1W0WLX2_HYPDU (GTPase Era, mitochondrial n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WLX2_HYPDU)

HSP 1 Score: 50.8 bits (120), Expect = 3.190e-5
Identity = 28/83 (33.73%), Postives = 49/83 (59.04%), Query Frame = 0
Query:    5 YQVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDY--KPTLSAESREAIAAVDLTLLLVDASKDVTKRGLRSL 85
            ++V + S+K HTTR N+L +MT    Q+   DTPG ++ E  + +  + +L  +   ++ +VD+  +LVDAS   ++ GL  L
Sbjct:  142 WRVCSTSSKVHTTRRNSLAIMTEENVQIVLVDTPGVIAKENGNKHHLERSLITDPEASVPSVDVLAVLVDASMRYSENGLDPL 224          
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: UPI000407149F (GTPase Era n=1 Tax=Inquilinus limosus TaxID=171674 RepID=UPI000407149F)

HSP 1 Score: 50.4 bits (119), Expect = 4.000e-5
Identity = 33/87 (37.93%), Postives = 47/87 (54.02%), Query Frame = 0
Query:    6 QVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERV 92
            +V+ VS K  TTR   LG++T GRTQ+ F DTPG      R D    + A +    A  DL +LLVDA+    +   R   G++E++
Sbjct:   32 KVAIVSPKVQTTRSRVLGILTEGRTQIVFVDTPGIFRPRRRLDR--AMVAAAWGGAAEADLVVLLVDAALKSVREDTR---GIIEKL 113          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LBN0_ECTSI1.650e-4896.63MEra, mitochondrial Era GTPase n=2 Tax=Ectocarpus ... [more]
A0A7S3LCM4_9STRA5.620e-1042.35Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S3G4F9_9EUKA6.730e-639.47Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A6P7SXP4_OCTVU6.750e-637.50GTPase Era, mitochondrial n=1 Tax=Octopus vulgaris... [more]
A0A2G8KUI9_STIJA6.770e-636.25Putative GTPase Era, mitochondrial n=1 Tax=Stichop... [more]
A0A368CBW5_9GAMM1.140e-542.86GTPase Era n=3 Tax=Gammaproteobacteria TaxID=1236 ... [more]
M1BI48_SOLTU1.240e-538.89GTP-binding protein erg n=10 Tax=Solanaceae TaxID=... [more]
UPI00071E050B2.280e-536.36GTPase Era, mitochondrial-like n=1 Tax=Octopus bim... [more]
A0A1W0WLX2_HYPDU3.190e-533.73GTPase Era, mitochondrial n=1 Tax=Hypsibius dujard... [more]
UPI000407149F4.000e-537.93GTPase Era n=1 Tax=Inquilinus limosus TaxID=171674... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 7..78
e-value: 1.2E-7
score: 31.8
NoneNo IPR availableGENE3D3.40.50.300coord: 1..93
e-value: 7.1E-13
score: 50.4
NoneNo IPR availablePANTHERPTHR42698FAMILY NOT NAMEDcoord: 6..85
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig68755contigEcto-sp13_S_contig68755:411..695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig68755.17845.1mRNA_Ecto-sp13_S_contig68755.17845.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig68755 411..695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig68755.17845.1 ID=prot_Ecto-sp13_S_contig68755.17845.1|Name=mRNA_Ecto-sp13_S_contig68755.17845.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=95bp
MVSRYQVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYK
PTLSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERVIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase