mRNA_Ecto-sp13_S_contig68755.17845.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: D8LBN0_ECTSI (MEra, mitochondrial Era GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBN0_ECTSI) HSP 1 Score: 167 bits (423), Expect = 1.650e-48 Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 1
Query: 16 QVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERVIR 282
+VSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKP LSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERV+R
Sbjct: 79 KVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPALSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERVLR 167
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A7S3LCM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCM4_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 5.620e-10 Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 1
Query: 19 VSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGF--VSHEERDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLL 267
VSAVS KRHTTR+ +G TV TQ+ F DTPGF V +++ L + IA VD +LL+VDA++++T +L L+
Sbjct: 1 VSAVSRKRHTTRQRIMGARTVQNTQLIFVDTPGFLKVDQAKKEGLDRNLVVTASAEIANVDFSLLVVDAARNLTDAYKETLVTLM 85
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A7S3G4F9_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4F9_9EUKA) HSP 1 Score: 52.8 bits (125), Expect = 6.730e-6 Identity = 30/76 (39.47%), Postives = 41/76 (53.95%), Query Frame = 1
Query: 16 QVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRG 243
++SAV+ K TTRE LGVMT G+ Q+ F DTPG V+ L A ++ + DL +VDA+K G
Sbjct: 129 KLSAVTHKAQTTRERVLGVMTEGKCQIVFMDTPGVVTSAGETKQYRALFATAKSSAQEADLVAFVVDAAKKGKAEG 204
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A6P7SXP4_OCTVU (GTPase Era, mitochondrial n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7SXP4_OCTVU) HSP 1 Score: 52.8 bits (125), Expect = 6.750e-6 Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 13 YQVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEE--RDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRGL-RSLTGLL 267
+++S+VS+K HTTR+NTLGV+T Q+ F DTPG V+ + + + + I AVD+ ++VD S R L +S+ LL
Sbjct: 144 WKMSSVSSKVHTTRKNTLGVLTENNNQIVFVDTPGLVTSKSFSKHSLDRNMITDPENCIQAVDMIGIIVDVSNRWYSRELGQSILQLL 231
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A2G8KUI9_STIJA (Putative GTPase Era, mitochondrial n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KUI9_STIJA) HSP 1 Score: 52.8 bits (125), Expect = 6.770e-6 Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = 1
Query: 4 VSRYQVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEE--RDDYKPTLSAESREAIAAVDLTLLLVDASKDVTK 237
V + ++ +VS K HTTR GV+T GR Q+ F DTPG V+H+ + L +++ + DL ++VDAS T+
Sbjct: 119 VLKRRIFSVSRKVHTTRARATGVLTHGRNQIIFLDTPGIVNHKHGRKHQLPRPLLIDAKNVLEEADLVAVIVDASNKWTR 198
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A368CBW5_9GAMM (GTPase Era n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A368CBW5_9GAMM) HSP 1 Score: 52.0 bits (123), Expect = 1.140e-5 Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 1
Query: 16 QVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPTLSAESREAIAAVDLTLLLVDASK 225
++S S K TTR+ LGV TVG Q+ F DTPG HE + K ++ + AIA VD+ L L+D +K
Sbjct: 33 KLSITSRKPQTTRQQVLGVKTVGADQMIFVDTPGLHRHEPKAINK-AMNRSATSAIADVDIVLFLIDRAK 101
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: M1BI48_SOLTU (GTP-binding protein erg n=10 Tax=Solanaceae TaxID=4070 RepID=M1BI48_SOLTU) HSP 1 Score: 52.0 bits (123), Expect = 1.240e-5 Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 1
Query: 16 QVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPTLSAESREAIAAVDL---TLLLVDASKDVTKRGLRSLTGLLERV 276
+VSAVS K +TT LGVMT G+TQ+ F DTPG + + YK + A A ++DL +++ DA + +TK R + L+ER+
Sbjct: 179 KVSAVSRKTNTTTHEVLGVMTKGKTQICFFDTPGLMLKKSGFPYKD-MKARIESAWRSIDLYDVLIVIFDAHRHLTKPDSR-VVRLIERM 266
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: UPI00071E050B (GTPase Era, mitochondrial-like n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=UPI00071E050B) HSP 1 Score: 51.2 bits (121), Expect = 2.280e-5 Identity = 32/88 (36.36%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 13 YQVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEE--RDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRGL-RSLTGLL 267
+++S+VS+K HTTR+NTLGV+T Q+ F DTPG V+ + + + + + I AV++ ++VD S R L +S+ LL
Sbjct: 144 WKMSSVSSKVHTTRKNTLGVLTENSNQIVFVDTPGLVTSKSFSKHNIDRNMITDPENCIQAVNMIGIIVDVSNKWHSRELGQSILQLL 231
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: A0A1W0WLX2_HYPDU (GTPase Era, mitochondrial n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WLX2_HYPDU) HSP 1 Score: 50.8 bits (120), Expect = 3.190e-5 Identity = 28/83 (33.73%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 13 YQVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDY--KPTLSAESREAIAAVDLTLLLVDASKDVTKRGLRSL 255
++V + S+K HTTR N+L +MT Q+ DTPG ++ E + + + +L + ++ +VD+ +LVDAS ++ GL L
Sbjct: 142 WRVCSTSSKVHTTRRNSLAIMTEENVQIVLVDTPGVIAKENGNKHHLERSLITDPEASVPSVDVLAVLVDASMRYSENGLDPL 224
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Match: UPI000407149F (GTPase Era n=1 Tax=Inquilinus limosus TaxID=171674 RepID=UPI000407149F) HSP 1 Score: 50.4 bits (119), Expect = 4.000e-5 Identity = 33/87 (37.93%), Postives = 47/87 (54.02%), Query Frame = 1
Query: 16 QVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPTLSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERV 276
+V+ VS K TTR LG++T GRTQ+ F DTPG R D + A + A DL +LLVDA+ + R G++E++
Sbjct: 32 KVAIVSPKVQTTRSRVLGILTEGRTQIVFVDTPGIFRPRRRLDR--AMVAAAWGGAAEADLVVLLVDAALKSVREDTR---GIIEKL 113 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig68755.17845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig68755.17845.1 >prot_Ecto-sp13_S_contig68755.17845.1 ID=prot_Ecto-sp13_S_contig68755.17845.1|Name=mRNA_Ecto-sp13_S_contig68755.17845.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=95bp MVSRYQVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKback to top mRNA from alignment at Ecto-sp13_S_contig68755:411..695+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig68755.17845.1 ID=mRNA_Ecto-sp13_S_contig68755.17845.1|Name=mRNA_Ecto-sp13_S_contig68755.17845.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=285bp|location=Sequence derived from alignment at Ecto-sp13_S_contig68755:411..695+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig68755:411..695+ >mRNA_Ecto-sp13_S_contig68755.17845.1 ID=mRNA_Ecto-sp13_S_contig68755.17845.1|Name=mRNA_Ecto-sp13_S_contig68755.17845.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=285bp|location=Sequence derived from alignment at Ecto-sp13_S_contig68755:411..695+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |