mRNA_Ecto-sp13_S_contig121.1783.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig121.1783.1
Unique NamemRNA_Ecto-sp13_S_contig121.1783.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig121.1783.1 vs. uniprot
Match: A0A6H5KZN5_9PHAE (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZN5_9PHAE)

HSP 1 Score: 1223 bits (3165), Expect = 0.000e+0
Identity = 688/750 (91.73%), Postives = 695/750 (92.67%), Query Frame = 2
Query:  131 MAAQXXXXXXXXXXXXXADPSLLAGSLSLTSGAWSAIKRTGACACCAARLVACRDPAVYACDERALRAQLDARFRSTNDANKDGAAVTSAARERCCPLCLGLLQHEVPIRIAARPRPSSEVHGDHNRSCEQASLPMPPAAGASDTQAQEIAPPPVLAEKTEAPGSTTAMATDRCERQALDETATAVASLGNSNGSSTSGAGRITGYCRSRMAEAIVECVTTRGYTVTSFGVTAAVPACLAVRNAAFLEVGLGGCDLSPEPSHQQXXXXXXXXXXXXXXXXXAAPTRAGQISRQAVVPVKEALKIGLAHALKAHLQTRQEAAAAVXXXXXAVVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPSRSGAGKPPRGWPAVGGRWAKKRQRREEQRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGLIQERRTGXXXXXXXXXXXXXXXXXXXXXXXGRAAEVAGSGDGVVDAEPQDSTGQAVDGVTPVSGTVVGDDARERSPVAAPAEAPVVRAAGAPPPSVTPSDASTHATSGGAEALCEVAIRRKSIHFWGRYTKFSRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGMGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA 2380
            MAA+  XXXXXXXXXXX DPSLLAGSLSLTSGAWSAIKRTGACACCAARLVACRDPAVYACDERALRAQLDARFRSTN AN+  AAVTS ARERCCPLCLGLLQHEVPIRIAARPRPSSEVHGDHNRSCEQASLPMPPAAGASDTQ+QEIAPPPV AEKTEAPGSTTAMA DRCERQALDETATAVA+ GNSNGSSTS   R TGYCRSRMAEAIVEC+T RGYTVTSFGVTAAVPACLAVRNAAFLE GLGGCDLSPEPSHQQXXXXXXXXXXXXXXXXXAAPTRAGQISRQAVVPVKEALKIGLA  L+AHLQTRQEAAAAVXXXXXAVVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPS SGAGKPPRGWPA GGRWAKKRQRREEQRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGLIQERRTG                       GRAAEV   GDGVVDAEP+DSTGQAVDGVTPVSGTVVG DARE SP AAPAEAPVVRAAG PPPS TPSDAS H TSGGAEALCEVAIRRKSIHFWGRYTK SRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLG GRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA
Sbjct:    1 MAAKQQXXXXXXXXXXXTDPSLLAGSLSLTSGAWSAIKRTGACACCAARLVACRDPAVYACDERALRAQLDARFRSTNAANEGSAAVTSTARERCCPLCLGLLQHEVPIRIAARPRPSSEVHGDHNRSCEQASLPMPPAAGASDTQSQEIAPPPVFAEKTEAPGSTTAMAIDRCERQALDETATAVAAPGNSNGSSTSDTCRNTGYCRSRMAEAIVECITARGYTVTSFGVTAAVPACLAVRNAAFLEAGLGGCDLSPEPSHQQXXXXXXXXXXXXXXXXXAAPTRAGQISRQAVVPVKEALKIGLARTLRAHLQTRQEAAAAVXXXXXAVVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPSHSGAGKPPRGWPAGGGRWAKKRQRREEQRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGLIQERRTGGEIEEVPVASLGGITGAADSSSGGRAAEVVRGGDGVVDAEPKDSTGQAVDGVTPVSGTVVGGDAREGSPAAAPAEAPVVRAAGVPPPSATPSDASIHPTSGGAEALCEVAIRRKSIHFWGRYTKLSRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA 750          
BLAST of mRNA_Ecto-sp13_S_contig121.1783.1 vs. uniprot
Match: D8LRA8_ECTSI (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA8_ECTSI)

HSP 1 Score: 865 bits (2235), Expect = 8.170e-305
Identity = 482/544 (88.60%), Postives = 488/544 (89.71%), Query Frame = 2
Query:  761 MAEAIVECVTTRGYTVTSFGVTAAVPACLAVRNAAFLEVGLGGCDLSPEPSHQQXXXXXXXXXXXXXXXXXAAPTRAGQISRQAVVPVKEALKIGLAHALKAHLQTRQEAAAAVXXXXXAVVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPSRSGAGKPPRGWPAVGGRWAKKRQRREEQRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGLIQERRTGXXXXXXXXXXXXXXXXXXXXXXXGRAAE----VAGSGDGVVDAEPQDSTGQAVDGVTPVSGTVVGDDARERSPVAAPAEAPVVRAAGAPPPSVTPSDASTHATSGGAEALCEVAIRRKSIHFWGRYTKFSRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGMGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA 2380
            MAEAIVECVTTRGYTVTSFGVTAAVPACLAVRNAAFLE GLGGCDLSP+PSHQ XXXXXXXXXXXXXXXXX APTRAGQISRQAVVPVKEALKIGLAH LKAHLQTRQE AAAV     AVVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPSRSGAGKPPRGWPA GGRWAKKRQRRE+QRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGLI+ERRTG                     XX         V G GDGVVDAEP+DSTGQAVDGVTPVSGTV G DARE SP A PAEAPVVRAAG PPPS TPSDASTH TS GAEALCEVAIRRK IHFWGRYTK SRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLG GRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKN GGGVAVSRL+V+GPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA
Sbjct:    1 MAEAIVECVTTRGYTVTSFGVTAAVPACLAVRNAAFLEAGLGGCDLSPKPSHQXXXXXXXXXXXXXXXXXXXAPTRAGQISRQAVVPVKEALKIGLAHVLKAHLQTRQEEAAAVAAVTAAVVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPSRSGAGKPPRGWPAGGGRWAKKRQRREQQRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGLIEERRTGGGIEEGIEEEPVASIGGATRAXXXXXXXXXXXVVGGGDGVVDAEPKDSTGQAVDGVTPVSGTVAGGDAREGSPAAIPAEAPVVRAAGPPPPSATPSDASTHPTSAGAEALCEVAIRRKPIHFWGRYTKLSRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNAGGGVAVSRLQVSGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA 544          
BLAST of mRNA_Ecto-sp13_S_contig121.1783.1 vs. uniprot
Match: A0A836CNG6_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG6_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.570e-41
Identity = 104/224 (46.43%), Postives = 134/224 (59.82%), Query Frame = 2
Query: 1739 AEALCEVAIRRKSIHFWGRYTKFSRSVPQTPWFKGF---------YSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGMGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAP-EELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA 2380
            A   C  A+ R+  + +GRY K SRSVPQ+PW  G           SVQE V+ P +A + C E  L GAGRED+DVRMLG GRPF LE++DS  +  ++A  LP L   VN   G+ N  G V VS  ++ G  ++ S +Q   EGKRKHYRCVVW SR V + EL  AL    P  +L V+Q+TP+RVLHRR  L R +++  +RA  +   FF L L TSA
Sbjct:  413 APLQCAAALERQPQYVFGRYRKLSRSVPQSPWTVGRGADAVRIGDASVQEIVAAPLEALARCREVKLAGAGREDMDVRMLGNGRPFVLEVIDSKVTAQQLADALPRLQREVNACTGL-NSEGAVEVSDFKLVGR-DIYSQIQEGAEGKRKHYRCVVWTSRDVSQAELDAALHAHPPGADLEVRQSTPVRVLHRRAALTRVKTVRALRAARVAPRFFVLSLTTSA 634          
BLAST of mRNA_Ecto-sp13_S_contig121.1783.1 vs. uniprot
Match: A0A5A8CYU0_CAFRO (tRNA pseudouridine(55) synthase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYU0_CAFRO)

HSP 1 Score: 145 bits (365), Expect = 3.930e-34
Identity = 97/222 (43.69%), Postives = 124/222 (55.86%), Query Frame = 2
Query: 1757 VAIRRKSIHFWGRYTKFSRSVPQTPWF----KGFY-SVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGMGRPFCLELVD------SLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEG---KRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA 2380
            VA+RR+S+   GRY+K +R V QT W     +G Y SV+E  ++      G  +  LHG+GREDVDVRMLG GRPF LEL        S  ++D+ A R+    +             GV V+ LR+A      SDV AV  G   KRK Y  +V     V  E L + L  DA +EL V Q TP+RVLHRR+L+DRP+ I GMR  W+N H+F L L TSA
Sbjct:   67 VAVRRESLFVRGRYSKTARGVSQTAWRLEGQEGLYRSVEEVAADHLAPLFGAADSRLHGSGREDVDVRMLGGGRPFVLELKQPRISSVSQAAIDQAAMRINRSPE-------------GVTVTELRLA----TTSDVDAVTAGAGDKRKEYAALVRCRAAVTPEFLRERL--DAVKELAVCQTTPVRVLHRRSLMDRPKVIHGMRTRWVNAHWFVLRLVTSA 269          
BLAST of mRNA_Ecto-sp13_S_contig121.1783.1 vs. uniprot
Match: A0A8J5Y2V0_DIALT (tRNA pseudouridine(55) synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y2V0_DIALT)

HSP 1 Score: 147 bits (371), Expect = 8.960e-34
Identity = 92/220 (41.82%), Postives = 123/220 (55.91%), Query Frame = 2
Query: 1751 CEVAIRRKS--IHFWGRYTKFSRSVPQTPWF-----KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGMGRPFCLELVDS--LRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGK-RKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA 2380
            C  ++R     +   GRY K+SR +PQTPW+     +G  SVQE +    Q        + HGAGREDVDVRMLG GRPF +E+ +   L     +   L  L  A+N A         V VS+LRV  P     D+   GE + RK YRCVVW+SR V   E+   L  D   E++++Q TPIRVLHRR LL RPR+++ MR+E +N H+  L+L T +
Sbjct:  241 CSASLRASHAPVCIGGRYNKYSREMPQTPWWLDNEKRGISSVQEELQTVLQPAYAASATVFHGAGREDVDVRMLGSGRPFVIEMQEPACLEPGTAVGTPLAELEAAINLASEH------VQVSQLRVV-PSSSIGDLVREGESEHRKAYRCVVWLSRRVSAREVADKL--DGAGEVLLEQRTPIRVLHRRPLLTRPRTVYSMRSELLNGHYLMLDLVTQS 451          
BLAST of mRNA_Ecto-sp13_S_contig121.1783.1 vs. uniprot
Match: A0A0D2WJ29_CAPO3 (tRNA pseudouridine(55) synthase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJ29_CAPO3)

HSP 1 Score: 145 bits (367), Expect = 1.660e-32
Identity = 96/212 (45.28%), Postives = 124/212 (58.49%), Query Frame = 2
Query: 1769 RKSIHFWGRYTKFSRSVPQTPWF-----KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGMGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEG---KRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA 2380
            R  I   GRY K+SR V Q+P+      KG  SV E ++ P  A+ G  E  L  +GRED+DVRMLG GRPF LE+ D+ RS      +L  L   VN A      GG V +  L VA   ++P    A+ EG   K+K Y  V+WVSRP+  E++  AL    PEE+VVQQ TP+RV+HRR +  RPRS++ MRA  INEH+  L L+T A
Sbjct:  392 RDPIFIGGRYNKYSRVVSQSPYIVGEERKGDTSVHELIAAPMLAYCGASEIKLSSSGREDMDVRMLGRGRPFVLEIADARRS-SLTPDKLAHLQALVNDA-----AGGRVHIRDLIVAQRADIP----ALNEGEDDKKKLYGAVIWVSRPITAEDIA-ALTR--PEEMVVQQMTPLRVMHRRAICTRPRSVYWMRAHQINEHYLLLCLSTQA 590          
BLAST of mRNA_Ecto-sp13_S_contig121.1783.1 vs. uniprot
Match: A0A7S2WQC3_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQC3_9STRA)

HSP 1 Score: 134 bits (337), Expect = 8.070e-31
Identity = 86/221 (38.91%), Postives = 123/221 (55.66%), Query Frame = 2
Query: 1754 EVAIR--RKSIHFWGRYTKFSRSVPQTPWF-----KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGMGRPFCLELVD-----SLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA 2380
            ++AI+  R+ +   GRY K +R VPQ+PWF     KG  SV+E +    QA  G  E     AGRED+DVRMLG GRPF +E++      +L +VD+I   + S     N    V+       V  L+   P  +  ++      K+K YRC+VWVS+PV  ++L   L  D+  +L V Q TPIRV+HRR+ + R + I  +R  WIN H+FQL++  SA
Sbjct:   58 DMAIKWVRQPLFLGGRYRKLARDVPQSPWFIDGQRKGRGSVEECLGHAIQAAFGADEVKFQAAGREDIDVRMLGHGRPFLVEVLQPRRLTALSAVDQIMRSINSDMTGPNKDQDVE-------VEALQWV-PRSVEKEMHDGAADKKKGYRCMVWVSKPVTPQDLEARL--DSVADLKVAQDTPIRVVHRRSPMIRDKMIHSLRTSWINSHWFQLDVVASA 268          
BLAST of mRNA_Ecto-sp13_S_contig121.1783.1 vs. uniprot
Match: A0A5D6XHV3_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHV3_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.290e-30
Identity = 85/213 (39.91%), Postives = 117/213 (54.93%), Query Frame = 2
Query: 1757 VAIRRKSIHFWGRYTKFSRSVPQTPWF-----KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGMGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA 2380
            V + R  ++  GRY KF R + Q+PW       G  SV+EA+ +    +        H AGREDVDVRMLG GRPF LE++D+ +  +  AA    + D VN A    NVG  +   R   A   E  + +QA  + K+K Y CVVW    +  E + K    DA ++L +QQ TP+RVLHRRTL+ RP+ I   + E +N+H+  L L TSA
Sbjct:  239 VTLERDPVYLQGRYLKFKRGLSQSPWVLEGVRMGESSVEEAIGDIALPYFRGASYKFHTAGREDVDVRMLGNGRPFILEVIDA-KKANLTAAEYKEVEDVVNAA----NVG--IVEIRHTKASTKEYFAGLQAGADSKKKTYCCVVWSEAELTPEAVAKL---DAIQDLTIQQETPVRVLHRRTLMTRPKVIHSAKCEVLNKHYMLLRLTTSA 441          
BLAST of mRNA_Ecto-sp13_S_contig121.1783.1 vs. uniprot
Match: A0A8K1C5Y9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Y9_PYTOL)

HSP 1 Score: 135 bits (341), Expect = 8.330e-30
Identity = 90/222 (40.54%), Postives = 120/222 (54.05%), Query Frame = 2
Query: 1739 AEALCEVAIRRKSIHFWGRYTKFSRSVPQTPWF-----KGFYSVQEAVSE---PFQAFSGCVEGLLHGAGREDVDVRMLGMGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA 2380
            ++  C V + R  ++  GRY K+ R + QTPW       G  SV+E + E   PF   SG      H AGREDVDVRMLG GRPF LE++D+ +S     A    L  AVNT        G V +  ++ A   E    +QA  + KRK Y CVVW  + +  + + K    DA  +L +QQ TPIRVLHRRTL+ RP+ I   + E +N+H+  L L TSA
Sbjct:  263 SQPTCGVVLERDPVYIQGRYLKYKRGLSQTPWVLDGVRMGDSSVEECIGEVGLPFFKGSGYK---FHTAGREDVDVRMLGNGRPFILEILDAKKS-KLTPAEYEQLQAAVNT-----THQGAVEIREVK-ASTKEYFGKLQAGADSKRKTYCCVVWSEKELTPDLVAKL---DAIHDLTIQQQTPIRVLHRRTLMTRPKVIHATKCEVLNKHYMLLRLTTSA 471          
BLAST of mRNA_Ecto-sp13_S_contig121.1783.1 vs. uniprot
Match: A0A196S979_BLAHN (tRNA pseudouridine(55) synthase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S979_BLAHN)

HSP 1 Score: 135 bits (339), Expect = 1.960e-29
Identity = 89/222 (40.09%), Postives = 121/222 (54.50%), Query Frame = 2
Query: 1727 TSGGAEALCEVAIRRKSIHFWGRYTKFSRSVPQTPWF-----KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGMGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATS 2377
            TS   E    +++ RK + F G Y K  R + QTPW      K   SV+E + + F+          H AGREDVDVRMLG GRPF +EL ++++  D  A  L  L DA+N   G  N    + V  LR   P     +++   EGK K Y  VV+   PV   EL K    +A ++L +QQ TP+RVLHRRTLL R ++IFGM+ +++N H F LE+  S
Sbjct:  280 TSPTFEPTIGLSVYRKPVFFTGNYRKMKRGLSQTPWIVDGKRKTEGSVEEYILDVFKNRLEARTYKFHSAGREDVDVRMLGDGRPFIIEL-ENVKRCDLTAEELKELEDAIN---GSTNE---MEVHYLRRCSPNGF-EELKKAAEGKHKLYVAVVFCENPVTPAELTKL---EAIKDLTIQQKTPVRVLHRRTLLTREKTIFGMKTQYVNPHHFILEIEAS 490          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig121.1783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZN5_9PHAE0.000e+091.73tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus... [more]
D8LRA8_ECTSI8.170e-30588.60tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus... [more]
A0A836CNG6_9STRA3.570e-4146.43tRNA pseudouridine(55) synthase n=1 Tax=Tribonema ... [more]
A0A5A8CYU0_CAFRO3.930e-3443.69tRNA pseudouridine(55) synthase n=3 Tax=Cafeteria ... [more]
A0A8J5Y2V0_DIALT8.960e-3441.82tRNA pseudouridine(55) synthase n=1 Tax=Diacronema... [more]
A0A0D2WJ29_CAPO31.660e-3245.28tRNA pseudouridine(55) synthase n=2 Tax=Capsaspora... [more]
A0A7S2WQC3_9STRA8.070e-3138.91tRNA pseudouridine(55) synthase n=1 Tax=Rhizochrom... [more]
A0A5D6XHV3_9STRA2.290e-3039.91tRNA pseudouridine(55) synthase n=1 Tax=Pythium br... [more]
A0A8K1C5Y9_PYTOL8.330e-3040.54Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A196S979_BLAHN1.960e-2940.09tRNA pseudouridine(55) synthase n=1 Tax=Blastocyst... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig121contigEcto-sp13_S_contig121:8443..12139 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score874.8
Seed ortholog evalue3.4e-251
Seed eggNOG ortholog2880.D8LRA8
Model size3129
KEGG koko:K07583
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.pseudouridine synthase activity
EggNOG OGsCOG1258@1,KOG2364@2759
Ec32 ortholog descriptionPseudouridine synthase, catalytic domain
Ec32 orthologEc-06_003220.1
EC5.4.99.25
Cds size2586
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462642.90021-UTR-Ecto-sp13_S_contig121:8442..85721681462642.90021-UTR-Ecto-sp13_S_contig121:8442..8572Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig121 8443..8572 +
1681462642.9380887-UTR-Ecto-sp13_S_contig121:11726..121391681462642.9380887-UTR-Ecto-sp13_S_contig121:11726..12139Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig121 11727..12139 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462642.913574-CDS-Ecto-sp13_S_contig121:8572..108231681462642.913574-CDS-Ecto-sp13_S_contig121:8572..10823Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig121 8573..10823 +
1681462642.9219582-CDS-Ecto-sp13_S_contig121:11186..112421681462642.9219582-CDS-Ecto-sp13_S_contig121:11186..11242Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig121 11187..11242 +
1681462642.92986-CDS-Ecto-sp13_S_contig121:11447..117261681462642.92986-CDS-Ecto-sp13_S_contig121:11447..11726Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig121 11448..11726 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig121.1783.1prot_Ecto-sp13_S_contig121.1783.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig121 8573..11726 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig121.1783.1

>prot_Ecto-sp13_S_contig121.1783.1 ID=prot_Ecto-sp13_S_contig121.1783.1|Name=mRNA_Ecto-sp13_S_contig121.1783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=862bp
MAAQQQQAATATSTPPPADPSLLAGSLSLTSGAWSAIKRTGACACCAARL
VACRDPAVYACDERALRAQLDARFRSTNDANKDGAAVTSAARERCCPLCL
GLLQHEVPIRIAARPRPSSEVHGDHNRSCEQASLPMPPAAGASDTQAQEI
APPPVLAEKTEAPGSTTAMATDRCERQALDETATAVASLGNSNGSSTSGA
GRITGYCRSRMAEAIVECVTTRGYTVTSFGVTAAVPACLAVRNAAFLEVG
LGGCDLSPEPSHQQQQSSPDEPEPPAATTPPAAPTRAGQISRQAVVPVKE
ALKIGLAHALKAHLQTRQEAAAAVAAVAAAVVTVDHQDSDFMVEVTARAP
EADAHAATALLGGPAPSRSGAGKPPRGWPAVGGRWAKKRQRREEQRNPGL
TVGAVKKGLNEMDDAGRERMRRWVQGLIQERRTGGEKEEEQAAILGGATG
AGDSSSGGRAAEVAGSGDGVVDAEPQDSTGQAVDGVTPVSGTVVGDDARE
RSPVAAPAEAPVVRAAGAPPPSVTPSDASTHATSGGAEALCEVAIRRKSI
HFWGRYTKFSRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGRE
DVDVRMLGMGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGG
VAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCE
DAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSA
EWQRSASSQPPTAAYFLLEAPTSRSSCTGISGEPCPQSEASSTAGRTSSS
LTLRTSKTDGAQRRMARDRGPRRFESIALFGREGGGTQRCAVGEKRAKHP
GGCLGKRHSFH*
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mRNA from alignment at Ecto-sp13_S_contig121:8443..12139+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig121.1783.1 ID=mRNA_Ecto-sp13_S_contig121.1783.1|Name=mRNA_Ecto-sp13_S_contig121.1783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3697bp|location=Sequence derived from alignment at Ecto-sp13_S_contig121:8443..12139+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGTGTGATATGATGATTGCCCTGGGCTAACTCAAGCAATACACTTTTCTG CGTGCTGTTTGCATCGCAACGAGAGAGAGGTGGCAGCGCAGGAGGGCAAA AGCAACAGCACAGCAGTCTTCACAAGAATCATGGCCGCACAACAACAGCA GGCGGCTACTGCAACTTCCACTCCACCACCGGCAGACCCCTCCCTCCTGG CCGGCTCTCTCTCCCTGACCTCAGGGGCATGGTCGGCGATCAAGCGAACC GGAGCTTGTGCCTGCTGCGCCGCTCGCCTGGTCGCATGCCGAGACCCTGC TGTGTACGCGTGCGACGAGCGGGCCTTGCGAGCGCAGCTCGACGCTCGTT TTCGCTCAACAAACGACGCCAACAAGGACGGCGCTGCTGTAACCAGCGCG GCGAGAGAGAGGTGCTGCCCTCTCTGCCTGGGCTTACTGCAGCACGAGGT GCCTATCCGCATAGCTGCCCGCCCTAGACCTTCCTCCGAGGTTCATGGGG ACCACAATCGCTCCTGCGAACAGGCATCGCTACCGATGCCTCCTGCGGCT GGCGCTTCTGACACACAGGCGCAGGAAATTGCGCCGCCGCCCGTCCTTGC CGAGAAAACAGAGGCGCCGGGATCAACCACGGCTATGGCGACTGACCGTT GCGAGCGCCAGGCGCTTGATGAAACGGCCACTGCGGTGGCCTCCCTAGGC AACAGCAACGGCAGCAGTACTAGCGGTGCCGGCAGAATCACGGGCTACTG TCGTTCGCGAATGGCGGAGGCGATCGTGGAATGCGTCACCACCCGGGGGT ACACCGTAACAAGCTTCGGGGTGACGGCGGCGGTGCCAGCATGCCTGGCG GTGCGGAACGCGGCGTTTCTGGAGGTGGGCTTGGGCGGCTGCGACCTCTC ACCCGAGCCTTCGCACCAGCAGCAGCAGTCCTCTCCGGATGAACCAGAGC CGCCCGCCGCTACCACGCCGCCGGCAGCGCCGACGAGGGCGGGTCAAATC TCCAGACAGGCCGTCGTGCCCGTCAAGGAGGCACTCAAGATCGGGCTGGC TCACGCGCTGAAGGCGCACCTCCAAACCAGACAGGAGGCGGCGGCGGCAG TGGCGGCAGTGGCGGCGGCAGTAGTGACGGTCGACCACCAGGACTCTGAC TTCATGGTGGAGGTAACCGCGAGGGCGCCCGAGGCCGACGCGCACGCGGC GACCGCCCTCTTGGGAGGCCCGGCTCCGTCCCGCTCGGGCGCCGGCAAGC CGCCGCGCGGCTGGCCCGCGGTGGGAGGGAGGTGGGCGAAGAAGCGCCAG CGACGGGAGGAGCAGCGTAACCCTGGGCTGACCGTCGGCGCGGTTAAGAA GGGCCTCAACGAGATGGACGACGCAGGCAGGGAGCGCATGAGGCGCTGGG TACAGGGGTTAATACAAGAGAGGAGGACGGGCGGGGAGAAAGAGGAAGAA CAGGCGGCCATTCTTGGCGGAGCCACCGGAGCAGGGGACAGCAGTAGCGG GGGGCGCGCGGCTGAAGTAGCCGGTAGTGGAGATGGTGTCGTCGACGCCG AGCCGCAAGACTCTACAGGCCAGGCGGTAGACGGTGTGACCCCCGTTAGC GGGACTGTTGTGGGTGATGATGCGAGGGAGAGATCACCCGTTGCGGCACC TGCGGAGGCGCCGGTGGTTCGAGCTGCGGGAGCCCCACCACCTTCCGTCA CACCAAGCGACGCCAGCACCCACGCAACCAGCGGCGGCGCGGAGGCGCTC TGCGAGGTCGCCATCCGGCGGAAGTCGATCCACTTCTGGGGCCGGTACAC AAAGTTCTCCCGGAGCGTCCCGCAGACGCCATGGTTCAAAGGTTTCTACT CCGTGCAGGAGGCGGTCTCTGAACCGTTCCAGGCGTTCTCCGGGTGCGTG GAAGGACTCCTGCACGGGGCCGGCCGGGAGGACGTCGACGTTCGGATGCT CGGAATGGGCCGCCCTTTCTGCCTGGAGCTGGTGGACTCCCTCCGGTCCG TCGACGAGATCGCGGCGCGCTTGCCGTCCCTTGCCGACGCGGTTAACACC GCGGGGGGCGTCAAGAACGTCGGCGGCGGCGTCGCGGTGTCCAGGCTCCG GGTAGCCGGCCCCGGGGAGCTCCCGAGCGACGTCCAGGCCGTCGGCGAGG GGAAGCGGAAGCACTACCGGTGCGTGGTGTGGGTGTCGAGGCCGGTGGGG AAGGAGGAGCTCGTGAAGGCGTTGTGCGAAGATGCGCCGGAGGAACTGGT GGTGCAGCAGGCCACGCCCATCCGCGTGCTGCACCGCAGGACGCTGCTCG ACAGGCCTAGGTCGATCTTCGGCATGCGCGCGGAGTGGATCAACGAGCAC TTTTTTCAGCTGGAACTCGCCACGTCCGCCGGTGAGAAGAGTCAGAGAGG GTTTTGTAGAGGACAGTCGGCGCGTTTTTTCTATTTTCTGAGGGTCACTT ATGTTTGCTTCACTCGTCTGTTGTTAATTTTCCCTTCCCTTTGCGGGTTA TCACTCTCATTGCTGTTGTTAGCTGCCACTTCTACCTTGTTTAAACCATT TTCGATCTTTGTTGAAGGTGGGATTTTCATTGGCTGTGTTGTGGGCGAGA ACATGCTAATTTTGTACACCCTTCTTGCACTAGATAGGTCTACAACAGCT CGAGACAACACGTGGTACCCTTGATCAACACGGTCCGCAAACAGGAACCG GACTGTTCAACACACACAGCCCGCGTTCTTGTCCTTGAATACAGAATGGC AACGGTCCGCCTCATCACAACCTCCTACTGCGGCTTACTTCCTCCTTGAG GCAAGTAACCATCAGCCGGTATTTTTTGGTCTTCGCGACAGGATTGTTTG TCGGACGGGACAGCAGTTTGTGCAATTGAAACCGAAAGAGACATCGAGCC CCATTTTATTCACTGCCTAGCTCTCGAGTGGCGGCACGTCCTGCAACTTC TCCTCGGTCTCACCCCCCCTCCTCCCCCGTACCTTCTTATGTCTCTTCCC AAAAGGCACCTACATCAAGGAGTTCGTGCACGGGGATCTCGGGCGAACCG TGCCCTCAATCGGAAGCCTCCTCGACTGCCGGGCGGACATCCTCCAGCTT GACGTTACGAACGTCGAAGACAGATGGAGCGCAGCGGAGGATGGCTAGGG ATAGAGGGCCACGGCGGTTTGAAAGCATCGCCTTGTTTGGCCGAGAGGGT GGAGGAACGCAGCGTTGCGCCGTAGGGGAGAAACGAGCAAAGCATCCTGG CGGATGTCTTGGCAAGCGTCACAGTTTTCACTGACCGACGGTAACGACAG CATCACAAGGCCCGTGTGCTGTGTGTGTCGATAGGAGGTGAAAGCTTGTG TGCTCCGCGTGGATAACGGCGGTCCTTCACATTGCGGTGGACCTTTTGTC CTTGGCCCTTGTTGGTTGAGCGTTGTTTCGGAGGACGTCACCGATTCGTC CACCTCAAGTGAACCCATTTCACTGCTCTTGAGTTCCCTCCCCGTCGCGT GATTTGCTAGGTAGAATGATGGCTTGGCACAGCCTCGTTTCAGCAACGCA AAGGATCAAGCGTGTTGCTTGTAGTGGGGAACGCTGAGGGCCAACTGCTG TCTGTGGGTTCTGCGGCATCGCCAGCAGGTGTGTCGGAGGGTAGACGATG CTGCGACAGGAACGTTTCCAAATACCAAACTACAGAGTTACGCGCAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig121:8443..12139+

>mRNA_Ecto-sp13_S_contig121.1783.1 ID=mRNA_Ecto-sp13_S_contig121.1783.1|Name=mRNA_Ecto-sp13_S_contig121.1783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2586bp|location=Sequence derived from alignment at Ecto-sp13_S_contig121:8443..12139+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCGCACAACAACAGCAGGCGGCTACTGCAACTTCCACTCCACCACC
GGCAGACCCCTCCCTCCTGGCCGGCTCTCTCTCCCTGACCTCAGGGGCAT
GGTCGGCGATCAAGCGAACCGGAGCTTGTGCCTGCTGCGCCGCTCGCCTG
GTCGCATGCCGAGACCCTGCTGTGTACGCGTGCGACGAGCGGGCCTTGCG
AGCGCAGCTCGACGCTCGTTTTCGCTCAACAAACGACGCCAACAAGGACG
GCGCTGCTGTAACCAGCGCGGCGAGAGAGAGGTGCTGCCCTCTCTGCCTG
GGCTTACTGCAGCACGAGGTGCCTATCCGCATAGCTGCCCGCCCTAGACC
TTCCTCCGAGGTTCATGGGGACCACAATCGCTCCTGCGAACAGGCATCGC
TACCGATGCCTCCTGCGGCTGGCGCTTCTGACACACAGGCGCAGGAAATT
GCGCCGCCGCCCGTCCTTGCCGAGAAAACAGAGGCGCCGGGATCAACCAC
GGCTATGGCGACTGACCGTTGCGAGCGCCAGGCGCTTGATGAAACGGCCA
CTGCGGTGGCCTCCCTAGGCAACAGCAACGGCAGCAGTACTAGCGGTGCC
GGCAGAATCACGGGCTACTGTCGTTCGCGAATGGCGGAGGCGATCGTGGA
ATGCGTCACCACCCGGGGGTACACCGTAACAAGCTTCGGGGTGACGGCGG
CGGTGCCAGCATGCCTGGCGGTGCGGAACGCGGCGTTTCTGGAGGTGGGC
TTGGGCGGCTGCGACCTCTCACCCGAGCCTTCGCACCAGCAGCAGCAGTC
CTCTCCGGATGAACCAGAGCCGCCCGCCGCTACCACGCCGCCGGCAGCGC
CGACGAGGGCGGGTCAAATCTCCAGACAGGCCGTCGTGCCCGTCAAGGAG
GCACTCAAGATCGGGCTGGCTCACGCGCTGAAGGCGCACCTCCAAACCAG
ACAGGAGGCGGCGGCGGCAGTGGCGGCAGTGGCGGCGGCAGTAGTGACGG
TCGACCACCAGGACTCTGACTTCATGGTGGAGGTAACCGCGAGGGCGCCC
GAGGCCGACGCGCACGCGGCGACCGCCCTCTTGGGAGGCCCGGCTCCGTC
CCGCTCGGGCGCCGGCAAGCCGCCGCGCGGCTGGCCCGCGGTGGGAGGGA
GGTGGGCGAAGAAGCGCCAGCGACGGGAGGAGCAGCGTAACCCTGGGCTG
ACCGTCGGCGCGGTTAAGAAGGGCCTCAACGAGATGGACGACGCAGGCAG
GGAGCGCATGAGGCGCTGGGTACAGGGGTTAATACAAGAGAGGAGGACGG
GCGGGGAGAAAGAGGAAGAACAGGCGGCCATTCTTGGCGGAGCCACCGGA
GCAGGGGACAGCAGTAGCGGGGGGCGCGCGGCTGAAGTAGCCGGTAGTGG
AGATGGTGTCGTCGACGCCGAGCCGCAAGACTCTACAGGCCAGGCGGTAG
ACGGTGTGACCCCCGTTAGCGGGACTGTTGTGGGTGATGATGCGAGGGAG
AGATCACCCGTTGCGGCACCTGCGGAGGCGCCGGTGGTTCGAGCTGCGGG
AGCCCCACCACCTTCCGTCACACCAAGCGACGCCAGCACCCACGCAACCA
GCGGCGGCGCGGAGGCGCTCTGCGAGGTCGCCATCCGGCGGAAGTCGATC
CACTTCTGGGGCCGGTACACAAAGTTCTCCCGGAGCGTCCCGCAGACGCC
ATGGTTCAAAGGTTTCTACTCCGTGCAGGAGGCGGTCTCTGAACCGTTCC
AGGCGTTCTCCGGGTGCGTGGAAGGACTCCTGCACGGGGCCGGCCGGGAG
GACGTCGACGTTCGGATGCTCGGAATGGGCCGCCCTTTCTGCCTGGAGCT
GGTGGACTCCCTCCGGTCCGTCGACGAGATCGCGGCGCGCTTGCCGTCCC
TTGCCGACGCGGTTAACACCGCGGGGGGCGTCAAGAACGTCGGCGGCGGC
GTCGCGGTGTCCAGGCTCCGGGTAGCCGGCCCCGGGGAGCTCCCGAGCGA
CGTCCAGGCCGTCGGCGAGGGGAAGCGGAAGCACTACCGGTGCGTGGTGT
GGGTGTCGAGGCCGGTGGGGAAGGAGGAGCTCGTGAAGGCGTTGTGCGAA
GATGCGCCGGAGGAACTGGTGGTGCAGCAGGCCACGCCCATCCGCGTGCT
GCACCGCAGGACGCTGCTCGACAGGCCTAGGTCGATCTTCGGCATGCGCG
CGGAGTGGATCAACGAGCACTTTTTTCAGCTGGAACTCGCCACGTCCGCC
GAATGGCAACGGTCCGCCTCATCACAACCTCCTACTGCGGCTTACTTCCT
CCTTGAGGCACCTACATCAAGGAGTTCGTGCACGGGGATCTCGGGCGAAC
CGTGCCCTCAATCGGAAGCCTCCTCGACTGCCGGGCGGACATCCTCCAGC
TTGACGTTACGAACGTCGAAGACAGATGGAGCGCAGCGGAGGATGGCTAG
GGATAGAGGGCCACGGCGGTTTGAAAGCATCGCCTTGTTTGGCCGAGAGG
GTGGAGGAACGCAGCGTTGCGCCGTAGGGGAGAAACGAGCAAAGCATCCT
GGCGGATGTCTTGGCAAGCGTCACAGTTTTCACTGA
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