prot_Ecto-sp13_S_contig68728.17838.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig68728.17838.1
Unique Nameprot_Ecto-sp13_S_contig68728.17838.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length238
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig68728.17838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004107Integrase, SAM-like, N-terminalPFAMPF13495Phage_int_SAM_4coord: 149..224
e-value: 1.0E-6
score: 29.1
IPR010998Integrase/recombinase, N-terminalGENE3D1.10.150.130coord: 136..237
e-value: 1.6E-13
score: 52.6
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 140..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig68728contigEcto-sp13_S_contig68728:5..718 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig68728.17838.1mRNA_Ecto-sp13_S_contig68728.17838.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig68728 5..718 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig68728.17838.1 ID=prot_Ecto-sp13_S_contig68728.17838.1|Name=mRNA_Ecto-sp13_S_contig68728.17838.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp
LKKRGKLYSLRAYIPAELAGKHRTSSGKPKTEKLYALGTSDRQEALRKAR
LLVPKVVQDIYGTPDPQEYEWKPDTERLIRYANHPDERFESPLKPIERVG
VRRDTHPDLEQAAENIAFQRGLKVATDWVAKATGKVVLGTAADAYLSFME
QRGRPANERTRKRRVTHIKEFAAWWDEDSTPLNALKPMDADRFIGHLRED
GNAPATINSKISSMSNLWRWASTRGHADSNIWSDQSVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004107Integrase_SAM-like_N
IPR010998Integrase_recombinase_N
IPR011010DNA_brk_join_enz