prot_Ecto-sp13_S_contig6869.17833.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6869.17833.1
Unique Nameprot_Ecto-sp13_S_contig6869.17833.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length432
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6869.17833.1 vs. uniprot
Match: D8LIU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU4_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 8.240e-42
Identity = 288/432 (66.67%), Postives = 290/432 (67.13%), Query Frame = 0 
Query:    1 YHQGEGHGASSAGVAAASTQATXXGXXXXXXVSPAVSPALSNGNNATAXXXXXXWLAKXXXXXXXXXXXXXGVGGAGSAVPSVNIAXXXXXXXXXXXXXXXXXXXXXXXXXGAAALAVPPTPSAPSPPLPLSSSLTSTTPVSSSSDGALRQAVGETLPPPSGAAGVVRPGPTXXXXXXXXXXXXXKLVSAPGTVSTATSSPXXAPVAPPPTPIKGNHFAQPPILWPVLAGMPPAQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAPSVLPXXXXXXVAGPSYLQAQPCAGATXXXXAPHGTSSHHGHPSQVRRADTAAVLTTGWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGKTGRSEEVS-HSVEALLALKEVFFAQGPGVDVPR 431
            Y QGEGHGA             XX XXXXXXVSPAVSPALSN NNATA      WLAK             GVGG GSAVPSVNIAXXXXXXXXXXXXXXXXXXXXXXXXX AAALAVPPTPSAPSPPLPLSS LTSTTPVSS SDG LRQAVGET  P             XXXXXXXXXXXXX                XX        PIKGNHFAQPPILWPV                    XXXXXXXXXXXXXXXXXXXXXXXX  AAP VLP      VAGPSYLQAQP AGA XXXX    T SHHGHPSQ  R     +L   W+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    G            HSVEALLALKEVFFAQ PGVDVPR
Sbjct:   10 YPQGEGHGAXXXXXXXXXXXXXXXXXXXXXXVSPAVSPALSNVNNATAMAAASAWLAKQQQAATVAATAAGGVGGVGSAVPSVNIAXXXXXXXXXXXXXXXXXXXXXXXXXXAAALAVPPTPSAPSPPLPLSSPLTSTTPVSSPSDGTLRQAVGET--PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKGNHFAQPPILWPVXXXX----------------XXXXXXXXXXXXXXXXXXXXXXXXXXAAPGVLPAGAGGGVAGPSYLQAQPYAGAXXXXXXXXXTPSHHGHPSQ--RGAGGEMLR--WQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAGXXXXXXXXXXXXHSVEALLALKEVFFAQRPGVDVPR 419
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BLAST of mRNA_Ecto-sp13_S_contig6869.17833.1 vs. uniprot
Match: A0A6H5JFS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFS7_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 2.880e-11
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0 
Query:  396 GKGKTGRSEEVSHSVEALLALKEVFFAQGPGVDVPR 431
            GKGKTGRSEEVSHSVEALLALKEVFFAQGPGVDVPR
Sbjct: 1419 GKGKTGRSEEVSHSVEALLALKEVFFAQGPGVDVPR 1454
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6869.17833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIU4_ECTSI8.240e-4266.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFS7_9PHAE2.880e-11100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6869contigEcto-sp13_S_contig6869:444..4877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6869.17833.1mRNA_Ecto-sp13_S_contig6869.17833.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6869 444..4877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6869.17833.1 ID=prot_Ecto-sp13_S_contig6869.17833.1|Name=mRNA_Ecto-sp13_S_contig6869.17833.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=432bp
YHQGEGHGASSAGVAAASTQATATGGPTTTTVSPAVSPALSNGNNATAMA
AASAWLAKQQQAATAAATAAGGVGGAGSAVPSVNIADNATAVAAASSWLA
KQAAAAIAAATGAAALAVPPTPSAPSPPLPLSSSLTSTTPVSSSSDGALR
QAVGETLPPPSGAAGVVRPGPTTSKAAAAAAAAAAKLVSAPGTVSTATSS
PSSAPVAPPPTPIKGNHFAQPPILWPVLAGMPPAQMAAAAGGGALASPAG
SSPPAAAPGAAAAAAAAAATTATAAPSVLPAGAGGGVAGPSYLQAQPCAG
ATSTAAAPHGTSSHHGHPSQVRRADTAAVLTTGWRRRRRRPRRRRKRRRR
ARRRWRRSRRRWRPAAAGGGGGDAAMAAAAAAAAAAAAAAAAAAGGKGKT
GRSEEVSHSVEALLALKEVFFAQGPGVDVPR*
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