mRNA_Ecto-sp13_S_contig6852.17813.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6852.17813.1
Unique NamemRNA_Ecto-sp13_S_contig6852.17813.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6852.17813.1 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE)

HSP 1 Score: 790 bits (2040), Expect = 2.590e-272
Identity = 570/663 (85.97%), Postives = 574/663 (86.58%), Query Frame = 3 
Query:  273 MAAEPEHLTTPAEMAASSSPSATTGDGQRERGRIGKRGAPQAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAAAAKXXXXXXXXXXXXXXXXXQATGGEWSPPARVHKSGAAARRVGKLRNRSSPAGSNSSSRGGDKPSSYSARLVADHQRAGVXXXXXXXXXXXXXXXXXIPXXXXXXXXXXXDAGERSPWTSGESSDSDAXXXXXQVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EATAGAGSASPTRKSSPFSFFKKFSLMERQSSSGHNRNMSTSSSVDMTTAGALPSERPASSAGNDGPISPLMVDTSAEARAAASGVSLRGVRPPPVTVTGGGQRIPVDPSTAAGNKALTSSPLTPKSSLEAAAXXXXXXXXXXXXXXXXXXXXQREELGLVEQLTNMVEVFDICDLLRKVSTSGSSRLDKHGAIVKPSAGXXXXXXPHHLRNMSVDTDQGMPQSPLGGGQSPTGLGSLASMELVRDSSKDWDTLMAGSADVSDLGNTMVQSVAEFFSF 2258
            MAAEPEHL TPAEMA SSSPSAT GDGQRERGRIGKRGAPQAFARKLAEIL TESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAAAAK    XXXXXXXXXX   QATGG+WSPPARVHKSGAAARRVGKLRN+SSPAGSN SS GGDKPSSYSARLVADH  AG   XXXXXXX        IP           DAGERSPWTSGESSDSDA     QVGV       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            XX EATAG GSASPTRKSSPFSFFKKFS MERQS SGHNRNMSTSSSVDMTTAGALPSERPASSAGNDGPIS LMVDTSAEARAAASGVSLRGVRPPPV+VTGGGQRIP+DPSTAAGNKALTSSPLTPKSSLEAAA XXXXXXXXXXXXXXXXXXXQREELGLVEQLTNMVEVFDICDLLRKVSTSGSSRLDKHGAIVKPS  XXXXX PHHLRNMSVDTDQGMPQ PL G QSPTGLGSLASMELVRDSSKDWDTLMAGSADVSDLGNTMVQSVAEFFSF
Sbjct:    1 MAAEPEHLATPAEMATSSSPSATAGDGQRERGRIGKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAAAAKATAKXXXXXXXXXXLKQQATGGQWSPPARVHKSGAAARRVGKLRNKSSPAGSNGSS-GGDKPSSYSARLVADHHMAGAATXXXXXXXGSGVGVG-IPPSSADTRAASSDAGERSPWTSGESSDSDAAATLPQVGVSAASAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRSYSPSRPEAAGECGRDAGGGAQQQRXXGEATAGPGSASPTRKSSPFSFFKKFSFMERQSGSGHNRNMSTSSSVDMTTAGALPSERPASSAGNDGPISSLMVDTSAEARAAASGVSLRGVRPPPVSVTGGGQRIPIDPSTAAGNKALTSSPLTPKSSLEAAAIXXXXXXXXXXXXXXXXXXXQREELGLVEQLTNMVEVFDICDLLRKVSTSGSSRLDKHGAIVKPSGXXXXXXVPHHLRNMSVDTDQGMPQPPLEGEQSPTGLGSLASMELVRDSSKDWDTLMAGSADVSDLGNTMVQSVAEFFSF 661
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BLAST of mRNA_Ecto-sp13_S_contig6852.17813.1 vs. uniprot
Match: D8LDA5_ECTSI (Putative Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA5_ECTSI)

HSP 1 Score: 728 bits (1880), Expect = 1.830e-248
Identity = 524/635 (82.52%), Postives = 531/635 (83.62%), Query Frame = 3 
Query:  393 QAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAAAAKXXXXXXXXXXXXXXXXXQATG------GEWSPPARVHKSGAAARRVGKLRNRSSPAGSNSSSRGGDKPSSYSARLVADHQRAGVXXXXXXXXXXXXXXXXXIPXXXXXXXXXXXDAGERSPWTSGESSDSDAXXXXXQVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------EATAGAGSASPTRKSSPFSFFKKFSLMERQSSSGHNRNMSTSSSVDMTTAGALPSERPASS-AGNDGPISPLMVDTSAEARAAASGVSLRGVRPPPVTVTGGGQRIPVDPSTAAGNKALTSSPLTPKSSLEAAAXXXXXXXXXXXXXXXXXXXXQREELGLVEQLTNMVEVFDICDLLRKVSTSGSSRLDKHGAIVKPSAGXXXXXXPHHLRNMSVDTDQGMPQSPLGGGQSPTGLGSLASMELVRDSSKDWDTLMAGSADVSDLGNTMVQSVAEFFSF 2258
            +AFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAAAAKXXXXXXXXXXXXXXXXX          GEWSPPARVHKSGAAARRVGKLRN+SSPAGSNSSSRGGDKPSSYSARLVADHQRAGV   XXXXXXXXXXXX X P           DAGERSPWTSGESSDSDA     Q GV    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                              EA AGAGSASPTRKSSPFSFFKKFS +ERQSSSGHNRNMSTSSSVDMTTAGALPSERPASS AG+DGPISPLMVDTSAEARAAASG SLRGVRPPPVTVTGGGQRIP+DPSTAAGNKALTSSPLTPKSSLEAAA XXXXXXXXXXXXXXXXXXXQREELGLVEQLTNMVEVFDICDLLRKVSTSGSSRLDKHGAI+KPS+ XXXXXXPHHLRNMSVDTDQGMPQSPLGGGQSPTGLGSLASMELVRDSSKDWDTLMAGSADVSDLGNTMVQSVAEFFSF
Sbjct:   12 EAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXRGEWSPPARVHKSGAAARRVGKLRNKSSPAGSNSSSRGGDKPSSYSARLVADHQRAGVATAXXXXXXXXXXXXVXXPASSADAAAGSSDAGERSPWTSGESSDSDAAATLPQAGVSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCVGRSHEQQQHALERGGRLAEKRQQQGRRSYSPSLRDTSGEVAGECGRGGGEGTQQLRDGGEAPAGAGSASPTRKSSPFSFFKKFSFVERQSSSGHNRNMSTSSSVDMTTAGALPSERPASSSAGDDGPISPLMVDTSAEARAAASGASLRGVRPPPVTVTGGGQRIPIDPSTAAGNKALTSSPLTPKSSLEAAAMXXXXXXXXXXXXXXXXXXXQREELGLVEQLTNMVEVFDICDLLRKVSTSGSSRLDKHGAIMKPSSXXXXXXXPHHLRNMSVDTDQGMPQSPLGGGQSPTGLGSLASMELVRDSSKDWDTLMAGSADVSDLGNTMVQSVAEFFSF 646
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BLAST of mRNA_Ecto-sp13_S_contig6852.17813.1 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK)

HSP 1 Score: 140 bits (353), Expect = 5.850e-32
Identity = 71/113 (62.83%), Postives = 85/113 (75.22%), Query Frame = 3 
Query:  369 RIGKRGAPQAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAA 707
            R G+RGAPQAFARKL EIL  E    +SWNA G+AF V D++RFS++IL KY+RHSKF+SFQRQLNLY FRKI +G+DAG YAH  FR+ +PD L  VRRS S S+   P  A
Sbjct:    5 RTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRRSQSSSSPSPPHPA 117
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BLAST of mRNA_Ecto-sp13_S_contig6852.17813.1 vs. uniprot
Match: A0A835YGA3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGA3_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.260e-27
Identity = 58/105 (55.24%), Postives = 79/105 (75.24%), Query Frame = 3 
Query:  369 RIGKRGAPQAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGS 683
            R GKRGAPQAFA KL E+L+ ES   +SW  +G AF++HD+E+F+ + L KY++H+  +SFQRQLNLY FRK +KG D+GG+ H  F+RDRP+ L  VRR++  S
Sbjct:   19 RFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQAS 123
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BLAST of mRNA_Ecto-sp13_S_contig6852.17813.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.360e-27
Identity = 57/100 (57.00%), Postives = 70/100 (70.00%), Query Frame = 3 
Query:  369 RIGKRGAPQAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRR 668
            R G+RGAPQ F RKL EIL+TE    I W  +G +F + ++E F  +IL KY+RH K+SSFQRQLNLY FRK+ KG D G YAH  F RD+P+ L  VRR
Sbjct:    5 RTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRR 104
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BLAST of mRNA_Ecto-sp13_S_contig6852.17813.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.290e-26
Identity = 57/100 (57.00%), Postives = 70/100 (70.00%), Query Frame = 3 
Query:  369 RIGKRGAPQAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRR 668
            R G+RGAPQ F RKL EILT E +  I W ++G +F + ++E F  +IL  Y+RH K+SSFQRQLNLY FRKI KG D G YAH  F RD+P+ L  VRR
Sbjct:   97 RTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRR 196
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BLAST of mRNA_Ecto-sp13_S_contig6852.17813.1 vs. uniprot
Match: A0A7S2WKC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKC6_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.370e-26
Identity = 62/106 (58.49%), Postives = 72/106 (67.92%), Query Frame = 3 
Query:  354 QRERGRIGKRGAPQAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRS 671
            QR+  R GKRGAPQAFA KL EIL  EST  I+W+  G AF + D++ F   +L KY+RH K+SSFQRQLNLY FRK  KG D GGY H  F R R D L  VRR+
Sbjct:   70 QRKYPRTGKRGAPQAFAHKLYEILEAESTEVIAWSGTGRAFFIKDMDIFVSQVLLKYFRHVKYSSFQRQLNLYGFRKATKGQDVGGYYHHYFMRSRRDLLPFVRRT 175
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BLAST of mRNA_Ecto-sp13_S_contig6852.17813.1 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.210e-25
Identity = 62/118 (52.54%), Postives = 78/118 (66.10%), Query Frame = 3 
Query:  369 RIGKRGAPQAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRS--ISGSARYEPAAAAAK 716
            R GKRGAPQ F RKL EIL  ES  TISW  +G +F + D+E F   +L KY+RH KFSSFQRQLNLY FRKI KG + G Y H  F RD+ D L  VRR+  ++G ++ +   A ++
Sbjct:   67 RTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTETGAYCHEFFARDQTDKLRLVRRTPQVTGRSKAKTEEATSE 184
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BLAST of mRNA_Ecto-sp13_S_contig6852.17813.1 vs. uniprot
Match: A0A835Z6Z9_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.680e-25
Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = 3 
Query:  375 GKRGAPQAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRR 668
            GKRGAPQAF R+L E+L  E  + +SW  NG  F ++D++ F    L KY++H+K++SFQRQ NLY FRKI +G DAG Y H  F++ R +DL  VRR
Sbjct:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6852.17813.1 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.430e-25
Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 3 
Query:  369 RIGKRGAPQAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYE 695
            R G+RGAPQ F RKL EILT ES+  ISW  NG++F + +++ F  +IL KY+RH K+SSFQRQLNLY FRKI KG D G YAH  F RD    L  VRR    + R +
Sbjct:   75 RTGRRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKIQKGPDTGAYAHEGFLRDDESQLVKVRRWAQSAGRQQ 183
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6852.17813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMN3_9PHAE2.590e-27285.97HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D8LDA5_ECTSI1.830e-24882.52Putative Heat Shock transcription factor n=1 Tax=E... [more]
A0A6V1QFS1_HETAK5.850e-3262.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YGA3_9STRA1.260e-2755.24HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A7S2BSE7_9STRA3.360e-2757.00Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2G7U9_9STRA1.290e-2657.00Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2WKC6_9STRA4.370e-2658.49Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2R5C8_9STRA1.210e-2552.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835Z6Z9_9STRA2.680e-2552.04HSF-type DNA-binding-domain-containing protein (Fr... [more]
A0A7S2CXJ7_9STRA4.430e-2555.05Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6852contigEcto-sp13_S_contig6852:990..7747 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score110.9
Seed ortholog evalue2.3e-21
Seed eggNOG ortholog35128.Thaps263978
Model size3537
KEGG koko:K09419
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.heat shock factor
EggNOG OGs2XG5V@2836,COG5169@1,KOG0627@2759
Cds size1989
COG Functional cat.K
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463941.4093533-UTR-Ecto-sp13_S_contig6852:989..12611681463941.4093533-UTR-Ecto-sp13_S_contig6852:989..1261Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6852 990..1261 +
1681463941.4590707-UTR-Ecto-sp13_S_contig6852:6471..77471681463941.4590707-UTR-Ecto-sp13_S_contig6852:6471..7747Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6852 6472..7747 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463941.4252076-CDS-Ecto-sp13_S_contig6852:1261..13731681463941.4252076-CDS-Ecto-sp13_S_contig6852:1261..1373Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6852 1262..1373 +
1681463941.435489-CDS-Ecto-sp13_S_contig6852:1583..27101681463941.435489-CDS-Ecto-sp13_S_contig6852:1583..2710Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6852 1584..2710 +
1681463941.4453633-CDS-Ecto-sp13_S_contig6852:5721..64711681463941.4453633-CDS-Ecto-sp13_S_contig6852:5721..6471Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6852 5722..6471 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6852.17813.1prot_Ecto-sp13_S_contig6852.17813.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6852 1262..6471 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6852.17813.1

>prot_Ecto-sp13_S_contig6852.17813.1 ID=prot_Ecto-sp13_S_contig6852.17813.1|Name=mRNA_Ecto-sp13_S_contig6852.17813.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=663bp
MAAEPEHLTTPAEMAASSSPSATTGDGQRERGRIGKRGAPQAFARKLAEI
LTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLY
SFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAAAAKAT
AKRNAAASKAAALKQQATGGEWSPPARVHKSGAAARRVGKLRNRSSPAGS
NSSSRGGDKPSSYSARLVADHQRAGVVAAAAAAAPGSGGGGAGIPASSAD
TAAGSSDAGERSPWTSGESSDSDAAATPPQVGVSAASAERKQQLQQQRKQ
VRRGGTAAAATDSSGDEASSSEDSDEDCVGRSHEEQQHALDRGGQLAEKQ
QQQGRRSYSPSRREAAGECGGDGGGGTQQQRDGGEATAGAGSASPTRKSS
PFSFFKKFSLMERQSSSGHNRNMSTSSSVDMTTAGALPSERPASSAGNDG
PISPLMVDTSAEARAAASGVSLRGVRPPPVTVTGGGQRIPVDPSTAAGNK
ALTSSPLTPKSSLEAAAMATAAAAAATSAMPPPPKREQREELGLVEQLTN
MVEVFDICDLLRKVSTSGSSRLDKHGAIVKPSAGGGGGGGPHHLRNMSVD
TDQGMPQSPLGGGQSPTGLGSLASMELVRDSSKDWDTLMAGSADVSDLGN
TMVQSVAEFFSF*
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mRNA from alignment at Ecto-sp13_S_contig6852:990..7747+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6852.17813.1 ID=mRNA_Ecto-sp13_S_contig6852.17813.1|Name=mRNA_Ecto-sp13_S_contig6852.17813.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6758bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6852:990..7747+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCATTTGTCCGTCTAAAAACTCTCGTTGCTGTCACTACTCCCCACCTTT
GTGTGTGTGCACTCCCTTCTTCTTTTGTCAGAGAGGGATAGAGGGTCGGG
GTGTTGCTTTCTTGGGTCGGCTCTGAGCAGGAGAACGGGAAACCTTTTAT
ATTTACACGTGGTTTCCACGTGGTTTCCATCGGAACCCGGGTATTAAACA
CGGAAAGGCGTCACGATTAAAAAAAAAAAGGGGCACGCGACACATCGCCA
CAGCACGATAGAGAGAGACAGTATGGCCGCGGAACCCGAACACCTCACGA
CACCTGCAGAGATGGCTGCTTCTTCCTCTCCTTCGGCAACGACGGGGGAT
GGCCAACGCGAGCGAGGGCGAATCGGGAAACGAGGTGAGTTTTGTTGCGC
ACGGGCGTTTTTTGGTGCTGCGTGGTTTCTCTCATCTGCTGTCTCTCTCT
GACCCCAGATGACGATTCCCATGTTTTGGTCGCTCGGCCCGACACCGTTG
CGTGCGCGCTGAGGGGTGTGCTCCTGTATAGCCAAGGGGGCTTTAACCCT
CTCTCACCCACCACCCTGCCGTATGTCTGGGACTCCCCCTGCAGGCGCGC
CGCAGGCTTTCGCGAGGAAGTTGGCCGAGATCCTGACAACCGAGAGCACG
GCGACGATCAGCTGGAACGCGAATGGATCCGCCTTTCAAGTACACGACGT
GGAGCGCTTCAGCGAGGACATCCTCACCAAGTACTATCGGCACTCTAAGT
TCTCTTCCTTCCAGCGCCAGCTCAACCTCTACTCCTTCCGCAAGATCGTC
AAGGGCGCCGATGCTGGCGGCTATGCGCACCCCATGTTCCGGCGCGACAG
GCCCGACGACCTCTACCACGTCCGCCGCTCCATCTCGGGTTCCGCTCGGT
ATGAACCGGCCGCCGCAGCTGCGAAGGCTACCGCAAAGCGCAACGCCGCG
GCTTCCAAGGCGGCCGCCCTGAAGCAGCAGGCAACTGGGGGCGAGTGGTC
CCCGCCCGCGCGCGTGCACAAGTCCGGAGCGGCGGCGAGGAGGGTCGGTA
AGTTGCGCAACAGGTCGTCGCCGGCCGGGAGCAACAGCAGCAGCAGAGGA
GGAGACAAGCCCTCCTCCTACTCCGCCCGACTCGTTGCGGACCACCAGAG
AGCGGGCGTTGTCGCAGCAGCAGCAGCGGCGGCACCTGGATCAGGGGGGG
GGGGCGCAGGGATCCCGGCCTCCTCGGCGGACACGGCGGCTGGTTCCTCG
GATGCGGGGGAGAGATCGCCGTGGACCTCCGGAGAGAGCAGCGACAGCGA
CGCTGCTGCCACTCCACCCCAGGTGGGGGTGTCAGCTGCTTCCGCGGAAA
GAAAACAGCAGCTGCAGCAGCAGAGAAAACAAGTGCGCCGCGGCGGCACT
GCCGCCGCTGCGACCGATTCTTCAGGCGACGAGGCATCGTCGTCGGAGGA
CAGCGACGAAGATTGCGTAGGAAGGAGCCATGAAGAACAGCAGCACGCGT
TGGATCGAGGAGGTCAGCTGGCGGAGAAACAGCAGCAGCAGGGGCGGAGG
AGCTATTCCCCCTCCCGCCGGGAGGCGGCTGGAGAGTGCGGCGGGGACGG
GGGGGGGGGGACGCAGCAGCAGCGGGATGGAGGAGAGGCAACCGCCGGTG
CTGGCTCGGCCTCTCCTACGCGCAAGTCGTCGCCCTTCTCCTTTTTCAAG
AAGTTCAGCTTAATGGAGAGGGTGAGAGAAAGAGCTTTCTTTGAATCACA
TCGTAAAATTCAAATACATTGAGCGCGGCAAAAAGCAAATACACCCCGTG
CTTCGGTGCGGGATTCTTTCATCAAGAGTTATTTAACTTCAAGTGGGTGC
GCCCCCGCCGCCGGATTGCTTGCTGCCTTCGGCTGGTGTTTGGTGCTAAT
GTGATAATGGGGGCTGCGCACGCGATACGTAGCGTGCAGACATCCTCGCT
TTCCGCACGGTAGATGTACCTCGACCCCACACAGCAATAAACAGCCTTAA
TTCCACAAACGCACCAGCTTGCTTGCCTCAACGAGTCTATCTTTTGGTCA
GGAAGTTGTAAATTTGTGTAGTGTCTGGTACCCCAAACGGGGCATAACTT
ACATGTGCTTGTTCTATCTGTTACTTCCGTCTATTTTTAATTTGAAACTC
TTTCCAATGACCAAGGGATGAAAGATCAGCGGCACTAAGTGAGTACAGAT
GATGCTTTCGGTGTTTTAGGGAGCAGGTGCATGTCTGGGCTCCTTACCGG
TACATGTCCTCGACAAGGTTACGTTTAAAGAATCACGAACTGTTTTTTGT
CGGTTCTCGGATTTTCGGAACACGTCGTGTGCACGTTCTACTGTCTCTCT
GGACCCTCTGTACTTTTCATACGACTATCCCATGTTTCATTTGTTCTCGC
ATACAGCTGCAGCGGCATCCCACGGTAGGGACGGATGAACTACTTGGTTT
CCGAGGGGTTGATTTTTTGGTTGAGACCCATGATCTCCCTGTTCTGAACA
GCCCTTCTGCAAAACAACTTTTTTTTCGGGTCTGATCCGTGCGGAGTTAA
AATTTGTTTTCGCCGTCTTTGTACTTGTTTCACAAGTTTGAGTTTTGGGT
GAGAGGCACGCCAGAACCGCAGTAGCGTCTTCACTTCCTCTACATGCGAG
GGCCCTCCTTTACTGCCTCCCCACCTCACAGCAGGTAGTTGTTCTTGGAG
ACGTGCAATAGGTTGGAGGTCTGCGTAGATTCTGGACCCCCATTGATCTG
TTGCGCCGGGGTGACATGGTAGTGTTCCATGGCGGTCTACCAAGCGTGTG
GGCGTCTCAGTCCGTACAGGTATAGAAGGCGACCCCTACTGCTGTACATG
CTTACCTGGGAGGGGAGAACTTCAAATTCAAAAAGTTAGCGGAAAGCGAA
GAACTTGTCGACCCCTGTCCATAGTATGCATATGAACTGGTGGTCATTTA
GAGGAGGTCGACAGAGCTGTTCTAAAGTGAAACAGACGTATGCGTACCAC
TCTCTTTCGATCCTCTCGACGAGTATTTTGCTGTCTGCATGGTTCTGGTT
GTGTTGGGGCTGCTACAAGAAAGAACCTACAGAGGACGGGAGAAATTACT
TAGCAGGCTCTTGATCACGTGGTAACGGGTTCTCCTCGTGCGTGTGTTCA
TGTGAACGGTACCAACGGTTCTCGACCCATGCTGCGTCTCCTCGAGACAG
AGGGTGTGCTGTTGCTGTCTGCGGCTGGGTGGGTGGGTGGGTGGCCCTCA
CTGCTGTTGTATGATTTGGTGCATTCCACACGTGTGCACTTATCAGTACC
AGGGCTGTTGCTCGCACAAAAGTCATCCGACAATCGAAAGCAGTTCCTCC
CACACATTTTGCTTGATGCTTGGGTTAGGGTTACGCTCTTAGCCGTACAG
CTTCCGTGTTGCCGCTACTTGCTCGACCGTCGCAATATGAGAGTGCGGGC
TACTTGGACGTCGGAACCGAATGTTTGTCTCGTAGCTGGGTAAGCAGACG
GCGGGCTTAGCGGTAGTTCGCGTTGTCGTACCAGACAGCCCCCCCCCCCC
CCCTCCTACTCCCGTGCCCAGCAGCTGCCGCTGCTGCTGCTGAGATAGGT
TCCATTTCTGCCAAATCCGGTCAAATTCTCTTTGCAAGACAACGCAACAT
TGCGCTGAGTGCATTGCAACGGTGTTTGGCGAACTCCCGGACCACTCCTG
ATGCTGCAGTGATTTTTATCATATTGCCTTGTCTTGCTTATGGTGTCGTG
CTACTGCTGTAAGGAAGATCGACGGAACACGTGCAGCTAAATCTGACGGC
GTGGTGTGATCGTTGTCAAGCTTAAATGAACCGAACCAATTCAGGCTGCT
CTTTCGGAAAGGTGGTTGTAGTCTAGGTACTTGGGCTTGAAGCGGCTGCA
TGGTCCATAGCTTGGGCATGAATCACTTTTCGTGTTGAAGCAAAAAACAT
TCTGAAGAAACGGCTGAGAAAGATGGTTGTTTTGGTTGGTCGGTTCTCCG
CGCCCGAAATTGCAGCATAGACCTGCTCAGGCGAGATACCTACTCGCTGT
CCTGGCCTTTTGTGAGTAGACCGATCTGTTCGAGGGACCCTGGCTGTTGA
ACGTTACATCCAGTCATAGACCAAAATTCCAAGATGACATCACGTAAGCA
AGTCGAAGCTTACCGCAGTGACGAGTGCGATGTTTCTTGGGCTTGGTTGA
CATTATTGGACCGCTATCGAAGTTGTTACACCTAGCTGGCAGACGTCCTT
TTTTGCGGAAGAACACGACATGGTCAAGAATGGTCGCGGGCATGATTTTC
TGCGATTGCGACGTGACGGGCGCGGTGGTTGTCGTTTGGACCAAAGGCCT
CTGTCTCACCATGTCTTTCCGAGCTTGCAGTTGAGGCTGCCGTCTAGTTT
GACAGCAGTTACGCTTGTGGTAGCACATACTATACTGAAGCTCACTATCA
CCTCCCTTATGGAGCACGACGGTGCTTGCCGGACAAAGGCTCGTGCCAGC
AGCTGCCGCAAGCCCATGGCATCGGAGTCGTTTTACCCAAAAGAACAGTA
CAGCACTGGTGTGTACCGCATGTCCGAAAGTATCGCGCCCCCCCAATGGA
ATCAGAGGGGCACGAACTCTCGATGACACTGCTACCGTTGTATGGCGTTC
GTTCAAGACAAGGTTGTGTTCTTGACCCTCCCTACGCTTTCCCCTGTCGT
CTCCTTCATCAATCCACCTTTTTGTTCTGCAGCAGTCGAGCAGCGGCCAC
AACAGAAACATGAGCACGTCGTCGAGCGTGGACATGACGACGGCAGGCGC
GCTCCCCTCCGAACGACCCGCCTCCTCCGCTGGCAACGACGGCCCAATTT
CGCCGCTCATGGTGGACACCTCGGCTGAGGCTCGCGCCGCGGCCTCCGGT
GTCAGCCTGCGCGGCGTTCGCCCCCCGCCCGTAACGGTAACCGGCGGCGG
GCAACGAATACCTGTCGATCCCAGCACCGCTGCCGGCAATAAGGCGCTAA
CCTCGTCCCCGCTGACGCCGAAGTCGTCGTTGGAGGCGGCGGCGATGGCG
ACGGCGGCGGCAGCGGCGGCGACATCGGCGATGCCGCCGCCGCCCAAGCG
AGAGCAGCGCGAGGAGCTGGGCCTCGTGGAGCAACTGACGAACATGGTGG
AGGTGTTCGACATCTGCGATCTGTTGAGGAAGGTCTCGACGTCGGGGTCT
TCGCGGCTGGACAAGCACGGTGCCATCGTGAAACCTTCCGCTGGTGGTGG
CGGAGGCGGAGGGCCGCACCACCTCAGAAACATGAGCGTAGACACGGACC
AGGGGATGCCGCAGTCTCCCCTCGGGGGGGGGCAGTCGCCCACGGGGCTG
GGTAGTCTCGCTTCCATGGAACTTGTGCGGGATTCCAGCAAAGACTGGGA
CACCCTCATGGCCGGGTCGGCGGATGTCAGCGACCTTGGAAATACCATGG
TGCAAAGCGTGGCAGAGTTCTTTTCCTTCTAATAGATGAACCAGGGGGCT
CTATGCAGAAAAAATATATGGTGTTGCTGTCTGTTTGTCAAAGGCGGACG
TGCCCCTTTTTCTCGTCTTGGTTACTCCGCGGCATCTAGAGACAACAGGT
AGTTTTTCTGTGATGAAAGCAGAGACGCGAGTGTTGTCCCTCGGAGTCGT
TACGTGCAGGAGACACGTTTACCCTCTCCGTTGACAAGACATCACACGCC
TCCTTTGATGTTTTCGTGAAAAGCCGTGGATCGCCGATCGGTCTGTTGCC
CACTGCTATCCTTTTCGAAGTTTTTGCTTTTTTTTCCGCGTTGTGGAGCA
CCGGCATGTATATCCTTTTCCGATTTGCTGTGTGTATTCTTGTTTGTGTG
TTGTGTTTGTTGGCTATTTGTGCGCGTGACGACGTTCCCTTGCCCTCTTT
TGTTTGGTCTGCTGGACGAGTGATCTTGTATCAGTAAGGAGACGGGAACG
GTGGCCACCGGGATGAACCGTTCGTGTTCCCTCTCTTCAGAGTAAGTGCT
CGAGGGAAGAGCACGACGAGGGGATCAGGGTAAACCTCAGTAACGTTGCG
GGTGTGCATGCAAGGACATCGTGGAACGCAGAGGGATACCAATCCGAGGC
AGTGGGGAGTATCATGGCACACGCATGTTGTTGTACGGGGGGGGGGATTC
CATGACCTCGTGGTGAGCGGAATAGCTCAACGCTGGTATTGTCTATTTGC
TTGTGCTGTATCGAGGCGGGGGGGGGGTAGAGAGACACCATCGCCGTGTC
GTACGAATGGGTGGCCTAGTCATTTCGAGTAGTGTATTTTTGTTGATTTG
TTTCTTTCGCCCGCCGCCACCTTGTCTTGGGGAGAGAGGAAAGCGAGGAA
GTTCCCACCCCCCTCCCTCGGTGTTTTCGCTCAACAGCCTGGCTGTCTTT
GTTTGTGGTTCGGTTCTAAGATCGCGCCCGGTCGAACGGATTGACGATGC
CCACGGGACTGGTGCTGTGTGGAGGGGGAGGGGGGGGCGGTTCGGAGTGT
AGATAGGGTGTTTTGCTTTCTTCGTAGAACCGATGAAAAAGATGTGTGAC
GCATTTTGCTGTTGCTCTCTTGTTTTTGTTAGTTCTTGTTTCAAGGTGGA
GGGGCCGAAACGTGGAGGAGGTTGGGCATGGGCTGCGAGAACACGAGGAA
TTAATGATACCGCTCCGTTCGTAAGGATAGAGCTGCTGGATGGAGCGTTG
TTGAGCGCGGGGATGGGTTGAAAATGCTCACTCGCCCTGTCCGTCGTATT
CTTCGTGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6852:990..7747+

>mRNA_Ecto-sp13_S_contig6852.17813.1 ID=mRNA_Ecto-sp13_S_contig6852.17813.1|Name=mRNA_Ecto-sp13_S_contig6852.17813.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1989bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6852:990..7747+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCGCGGAACCCGAACACCTCACGACACCTGCAGAGATGGCTGCTTC
TTCCTCTCCTTCGGCAACGACGGGGGATGGCCAACGCGAGCGAGGGCGAA
TCGGGAAACGAGGCGCGCCGCAGGCTTTCGCGAGGAAGTTGGCCGAGATC
CTGACAACCGAGAGCACGGCGACGATCAGCTGGAACGCGAATGGATCCGC
CTTTCAAGTACACGACGTGGAGCGCTTCAGCGAGGACATCCTCACCAAGT
ACTATCGGCACTCTAAGTTCTCTTCCTTCCAGCGCCAGCTCAACCTCTAC
TCCTTCCGCAAGATCGTCAAGGGCGCCGATGCTGGCGGCTATGCGCACCC
CATGTTCCGGCGCGACAGGCCCGACGACCTCTACCACGTCCGCCGCTCCA
TCTCGGGTTCCGCTCGGTATGAACCGGCCGCCGCAGCTGCGAAGGCTACC
GCAAAGCGCAACGCCGCGGCTTCCAAGGCGGCCGCCCTGAAGCAGCAGGC
AACTGGGGGCGAGTGGTCCCCGCCCGCGCGCGTGCACAAGTCCGGAGCGG
CGGCGAGGAGGGTCGGTAAGTTGCGCAACAGGTCGTCGCCGGCCGGGAGC
AACAGCAGCAGCAGAGGAGGAGACAAGCCCTCCTCCTACTCCGCCCGACT
CGTTGCGGACCACCAGAGAGCGGGCGTTGTCGCAGCAGCAGCAGCGGCGG
CACCTGGATCAGGGGGGGGGGGCGCAGGGATCCCGGCCTCCTCGGCGGAC
ACGGCGGCTGGTTCCTCGGATGCGGGGGAGAGATCGCCGTGGACCTCCGG
AGAGAGCAGCGACAGCGACGCTGCTGCCACTCCACCCCAGGTGGGGGTGT
CAGCTGCTTCCGCGGAAAGAAAACAGCAGCTGCAGCAGCAGAGAAAACAA
GTGCGCCGCGGCGGCACTGCCGCCGCTGCGACCGATTCTTCAGGCGACGA
GGCATCGTCGTCGGAGGACAGCGACGAAGATTGCGTAGGAAGGAGCCATG
AAGAACAGCAGCACGCGTTGGATCGAGGAGGTCAGCTGGCGGAGAAACAG
CAGCAGCAGGGGCGGAGGAGCTATTCCCCCTCCCGCCGGGAGGCGGCTGG
AGAGTGCGGCGGGGACGGGGGGGGGGGGACGCAGCAGCAGCGGGATGGAG
GAGAGGCAACCGCCGGTGCTGGCTCGGCCTCTCCTACGCGCAAGTCGTCG
CCCTTCTCCTTTTTCAAGAAGTTCAGCTTAATGGAGAGGCAGTCGAGCAG
CGGCCACAACAGAAACATGAGCACGTCGTCGAGCGTGGACATGACGACGG
CAGGCGCGCTCCCCTCCGAACGACCCGCCTCCTCCGCTGGCAACGACGGC
CCAATTTCGCCGCTCATGGTGGACACCTCGGCTGAGGCTCGCGCCGCGGC
CTCCGGTGTCAGCCTGCGCGGCGTTCGCCCCCCGCCCGTAACGGTAACCG
GCGGCGGGCAACGAATACCTGTCGATCCCAGCACCGCTGCCGGCAATAAG
GCGCTAACCTCGTCCCCGCTGACGCCGAAGTCGTCGTTGGAGGCGGCGGC
GATGGCGACGGCGGCGGCAGCGGCGGCGACATCGGCGATGCCGCCGCCGC
CCAAGCGAGAGCAGCGCGAGGAGCTGGGCCTCGTGGAGCAACTGACGAAC
ATGGTGGAGGTGTTCGACATCTGCGATCTGTTGAGGAAGGTCTCGACGTC
GGGGTCTTCGCGGCTGGACAAGCACGGTGCCATCGTGAAACCTTCCGCTG
GTGGTGGCGGAGGCGGAGGGCCGCACCACCTCAGAAACATGAGCGTAGAC
ACGGACCAGGGGATGCCGCAGTCTCCCCTCGGGGGGGGGCAGTCGCCCAC
GGGGCTGGGTAGTCTCGCTTCCATGGAACTTGTGCGGGATTCCAGCAAAG
ACTGGGACACCCTCATGGCCGGGTCGGCGGATGTCAGCGACCTTGGAAAT
ACCATGGTGCAAAGCGTGGCAGAGTTCTTTTCCTTCTAA
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