prot_Ecto-sp13_S_contig6851.17811.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6851.17811.1
Unique Nameprot_Ecto-sp13_S_contig6851.17811.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
BLAST of mRNA_Ecto-sp13_S_contig6851.17811.1 vs. uniprot
Match: D7FYG8_ECTSI (SGF29 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYG8_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 1.470e-63
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
Query:    1 MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELEALHNKFLGQAREKMKARGDSQELDPKVLVDDPPLMAEIDSLFSRTKQIVDEK 102
            MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELEALHNKFLGQAREKMKARGDSQELDPKVLVDDPPLMAEIDSLFSRTKQIVDEK
Sbjct:    1 MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELEALHNKFLGQAREKMKARGDSQELDPKVLVDDPPLMAEIDSLFSRTKQIVDEK 102          
BLAST of mRNA_Ecto-sp13_S_contig6851.17811.1 vs. uniprot
Match: A0A4D9CMQ3_9STRA (SGF29 C-terminal domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CMQ3_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 8.370e-10
Identity = 34/91 (37.36%), Postives = 54/91 (59.34%), Query Frame = 0
Query:    1 MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELEALHNKFLGQAREKMKARGDSQELDPKVLVDDPPLMAEIDSL 91
            MAY    +E  T+++DF++ +  +PN+I+R+  LMR LDKDA  L   L  L  ++LGQA+  ++   +S+  +   LV+D    AEI  L
Sbjct:    1 MAYAKHHEESGTYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAKRSLQGAKESKPEERLKLVEDKEASAEIADL 91          
BLAST of mRNA_Ecto-sp13_S_contig6851.17811.1 vs. uniprot
Match: A0A835ZFQ3_9STRA (SGF29 tudor-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ3_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.830e-8
Identity = 33/101 (32.67%), Postives = 61/101 (60.40%), Query Frame = 0
Query:   14 VDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELEALHNKFLG-----------QAREKMKARGD-SQELDPKVLVDDPPLMAEIDSLFSRTKQIVDEK 102
            ++DF+D ++T+PNE++R+  L+R+LDK     S+EL      F+            +A+ K++ R D  ++++P  LV+DP  +A+I +  ++ +QI DEK
Sbjct:    4 IEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFISVSLLLDEKGTREAKRKLRERTDRDRDVEPAKLVEDPVALADIAAKRAKCQQIADEK 104          
BLAST of mRNA_Ecto-sp13_S_contig6851.17811.1 vs. uniprot
Match: A0A7S2W6R2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6R2_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 7.690e-8
Identity = 34/102 (33.33%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    1 MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELEALHNKFLGQAREKMKARGDSQELDPKVLVDDPPLMAEIDSLFSRTKQIVDEK 102
            MA+RG  +   TF++D++D ++ +PN++RR  +LMR LDK+   +S ELE    K L + +++ +  G+        L D   +  +I +   R +Q+VDEK
Sbjct:    1 MAHRGA-ESTTTFLEDYVDSLSGLPNDLRRLVELMRDLDKEGTSVSKELEDTEKKVLSELKKRQRQTGN--------LGDYTAVKEDIAAKRRRAEQMVDEK 93          
BLAST of mRNA_Ecto-sp13_S_contig6851.17811.1 vs. uniprot
Match: A0A7S1G8T7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8T7_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.550e-6
Identity = 26/91 (28.57%), Postives = 56/91 (61.54%), Query Frame = 0
Query:   12 TFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELEALHNKFLGQAREKMKARGDSQELDPKVLVDDPPLMAEIDSLFSRTKQIVDEK 102
            T+++D+++ +T++P+EI+RN +LMR LD D+  +  E++ L   ++ +AR +++ + D +  +   + +D   +AE+ +      Q  DEK
Sbjct:    3 TYLEDYVEKITSLPDEIKRNFELMRELDSDSQSMLQEIKQLQQAYVQKARRRVQ-KADGRAGNLAEVAEDKEALAELKAKREVATQKADEK 92          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6851.17811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FYG8_ECTSI1.470e-63100.00SGF29 C-terminal domain-containing protein n=2 Tax... [more]
A0A4D9CMQ3_9STRA8.370e-1037.36SGF29 C-terminal domain-containing protein n=3 Tax... [more]
A0A835ZFQ3_9STRA1.830e-832.67SGF29 tudor-like domain-containing protein n=1 Tax... [more]
A0A7S2W6R2_9STRA7.690e-833.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1G8T7_9STRA3.550e-628.57Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024610Inhibitor of growth protein, N-terminal histone-bindingPFAMPF12998INGcoord: 13..102
e-value: 2.1E-7
score: 31.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6851contigEcto-sp13_S_contig6851:810..7859 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6851.17811.1mRNA_Ecto-sp13_S_contig6851.17811.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6851 810..7859 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6851.17811.1 ID=prot_Ecto-sp13_S_contig6851.17811.1|Name=mRNA_Ecto-sp13_S_contig6851.17811.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELE
ALHNKFLGQAREKMKARGDSQELDPKVLVDDPPLMAEIDSLFSRTKQIVD
EKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024610ING_N_histone_binding