prot_Ecto-sp13_S_contig6850.17809.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6850.17809.1
Unique Nameprot_Ecto-sp13_S_contig6850.17809.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length488
Homology
BLAST of mRNA_Ecto-sp13_S_contig6850.17809.1 vs. uniprot
Match: A0A6H5JP83_9PHAE (EAF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP83_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 2.640e-116
Identity = 326/455 (71.65%), Postives = 335/455 (73.63%), Query Frame = 0
Query:    2 GHELDAGVVDARSSNGSLSKSATVSDAAVASISPATGERANXXXXXXXXXXXXXGKRRTGKKPRPAEKGLKVAATALPATSRSEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRDGRLVADLALPSARQQPPPEPRGGVVVDATAXXXXAARTSHAGKPMPLARSKSGGPATPADEEEGPTMAALFGEEEDNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDVADGAMPSAAAAPAAPATKSYPPLRTAPEKKPAWREGERYGVVLGDSFYSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGENNPWQYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRWRGRGSGTVGDVGGGGQQQRWAAEMEYASRDPSNPEPVRFTGDAVRYEYLRAV 456
            GHE DAGVVDARSS G LSKSA  S+AAVAS+ PATGER               GKRRTGKKP  AE+ LK AATA+PA SRS    XXXXXXXXXXXX                                                    A  R GRL ADLAL  ARQQ   EPRGGVVVDA A    AARTSHAGKP P A SKSGG ATPADEEEGP+MAALFGEEEDNE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  T VADGAMPSAAAA AAPATKSYPPL+TAPEKKPAWREGERYGVVLG+SFY S XXXXXXXXXXXXXXXXXXXXXXXXXXXXX TGENNP QYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRWRG      GDVGGGGQQQRWAAEMEY SRDPSNPEPVRFTGDAVR + +  V
Sbjct:  559 GHEKDAGVVDARSSEGPLSKSAAASNAAVASLCPATGERTKAPPVRSPAKQPVAGKRRTGKKPGAAEEKLKGAATAVPAASRSX---XXXXXXXXXXXXGARAGGGIAESALPTAGGSHAKKRPRSPLPSPRQEEEGGRPERHGEAKRRAAAAPRGGRLAADLALLPARQQRQTEPRGGVVVDANATA--AARTSHAGKPTPSASSKSGGSATPADEEEGPSMAALFGEEEDNEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTGVADGAMPSAAAA-AAPATKSYPPLQTAPEKKPAWREGERYGVVLGESFYGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TGENNPGQYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRWRGXXXXXXGDVGGGGQQQRWAAEMEYESRDPSNPEPVRFTGDAVRAQDVECV 1006          
BLAST of mRNA_Ecto-sp13_S_contig6850.17809.1 vs. uniprot
Match: D7FRR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR3_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 7.860e-85
Identity = 230/293 (78.50%), Postives = 234/293 (79.86%), Query Frame = 0
Query:  198 AGKPMPLARSKSGGPATPADEEEGPTMAALFGEEEDNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAT--DVADGAMPSAAAAPAAPATKSYPPLRTAPEKKPAWREGERYGVVLGDSFYSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGENNPWQYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRWRGRGSGTVGDVGGGGQQQRWAAEMEYASRDPSNPEPVRFTGDAVRYEYLRAVADGGYFRWRTRFGRLAGMPAAGGYCRIRKAVS 488
            AGKP P A            EEEGPTMAALFGEEEDNE     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A   DVADGAMPSAAAAPA   TKSYPPL+TAPEK PAWREGERYGVVLGDSFY S XXXXXXXXXXXXXXXXXXXXX         TGE+NP QYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRW+GRGSGT GDV GGGQQQRWAAE+EY SRDPSNPEPVRFTGDAVR   L A    G F      GRL  MPAAGGYCRIRKAVS
Sbjct:  511 AGKPTPSAXXXXXXXXXXXGEEEGPTMAALFGEEEDNEPESATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAGIDVADGAMPSAAAAPA---TKSYPPLQTAPEKMPAWREGERYGVVLGDSFYGSGXXXXXXXXXXXXXXXXXXXXXRRGLVGDDDTGESNPGQYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRWKGRGSGTGGDVVGGGQQQRWAAEVEYESRDPSNPEPVRFTGDAVRI--LCARGRWGTFWGAHPLGRLNEMPAAGGYCRIRKAVS 798          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6850.17809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP83_9PHAE2.640e-11671.65EAF domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FRR3_ECTSI7.860e-8578.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6850contigEcto-sp13_S_contig6850:6378..7928 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6850.17809.1mRNA_Ecto-sp13_S_contig6850.17809.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6850 6378..7928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6850.17809.1 ID=prot_Ecto-sp13_S_contig6850.17809.1|Name=mRNA_Ecto-sp13_S_contig6850.17809.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=488bp
PGHELDAGVVDARSSNGSLSKSATVSDAAVASISPATGERANAPAVQSPA
KQSVAGKRRTGKKPRPAEKGLKVAATALPATSRSEPAAAAPPPPGPTEGG
ARAGGGIAESARPTAGGSHAKKRPRSPPPSRRHEEEGGCPEQRAGAKRRA
AAAPQRDGRLVADLALPSARQQPPPEPRGGVVVDATATATAAARTSHAGK
PMPLARSKSGGPATPADEEEGPTMAALFGEEEDNEPESATAAAEADVEAP
GAAVLAAAAAALAVEVAAATATATASAAATDVADGAMPSAAAAPAAPATK
SYPPLRTAPEKKPAWREGERYGVVLGDSFYSSGGGGGTLAASGKRGGRRA
KGGNRRGVVDDDDTGENNPWQYVHLKYDFVPGRTNLDVPATLRQRPLTEN
EGRWRGRGSGTVGDVGGGGQQQRWAAEMEYASRDPSNPEPVRFTGDAVRY
EYLRAVADGGYFRWRTRFGRLAGMPAAGGYCRIRKAVS
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