prot_Ecto-sp13_S_contig6850.17808.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6850.17808.1
Unique Nameprot_Ecto-sp13_S_contig6850.17808.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length160
Homology
BLAST of mRNA_Ecto-sp13_S_contig6850.17808.1 vs. uniprot
Match: D7FRR5_ECTSI (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR5_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 2.350e-93
Identity = 143/145 (98.62%), Postives = 143/145 (98.62%), Query Frame = 0
Query:   15 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARVEC 159
            FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGP ET TSRKHDAMERWSNSLRSLSSFVAARVEC
Sbjct:  214 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVEC 358          
BLAST of mRNA_Ecto-sp13_S_contig6850.17808.1 vs. uniprot
Match: A0A6H5JKQ1_9PHAE (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ1_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.070e-91
Identity = 142/145 (97.93%), Postives = 144/145 (99.31%), Query Frame = 0
Query:   15 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARVEC 159
            FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKT EVEKLLI+LILDRRLNGKI+QIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARVEC
Sbjct:  306 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTTEVEKLLINLILDRRLNGKINQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARVEC 450          
BLAST of mRNA_Ecto-sp13_S_contig6850.17808.1 vs. uniprot
Match: A0A7S2B813_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B813_9STRA)

HSP 1 Score: 168 bits (426), Expect = 3.590e-50
Identity = 82/143 (57.34%), Postives = 108/143 (75.52%), Query Frame = 0
Query:   15 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARV 157
            +QEEKEI+AM  LR AYE NDL  FER L DKRNRI  DPF+M Y+ PL++R+RE VL+ L KPY +I + F+A EL L+ +EVE LL+D+ILD+R+ GKIDQI GFLLL G  +    +K+DA+E+W+N+L SL+  + ARV
Sbjct:   55 YQEEKEIIAMRALRSAYEANDLVSFERALLDKRNRIISDPFIMQYVEPLQRRMREQVLLVLVKPYHRIRVEFVAAELKLEVSEVELLLVDMILDKRVFGKIDQINGFLLLGGESDNVVEKKYDALEKWTNTLSSLNKNLGARV 197          
BLAST of mRNA_Ecto-sp13_S_contig6850.17808.1 vs. uniprot
Match: A0A7S2BKS2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKS2_9STRA)

HSP 1 Score: 168 bits (426), Expect = 3.240e-47
Identity = 80/143 (55.94%), Postives = 113/143 (79.02%), Query Frame = 0
Query:   15 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARV 157
            +QE+ EIVAM +LR AYE NDL  FE+TL DK N+I  DPF+MTY+ PLR+R+RE VL+ L +PYK+I + F+A EL L+   VE LL+D+I+D+R++GKIDQI+GFLLL G Q + +S+K+DA+E+W  +L SL++ ++ARV
Sbjct:  330 YQEDPEIVAMRNLRSAYEANDLGSFEKTLLDKSNKIIADPFIMTYVEPLRRRMREQVLLALLRPYKRIRIEFVAQELKLEVMAVELLLVDMIMDKRIDGKIDQIQGFLLLSGDQTSVSSKKYDALEKWCTTLESLTNNLSARV 472          
BLAST of mRNA_Ecto-sp13_S_contig6850.17808.1 vs. uniprot
Match: A0A6V1ITC2_HETAK (COP9 signalosome complex subunit 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ITC2_HETAK)

HSP 1 Score: 157 bits (397), Expect = 3.790e-43
Identity = 70/144 (48.61%), Postives = 111/144 (77.08%), Query Frame = 0
Query:   15 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARVE 158
            +QE++EI AMM LR AY+ N+LAKFERTL + RNRI +DPF+M+Y+ PLR ++RE VLI L +PY K++M F++ EL ++  EVE+L++++ILD R  GKIDQI G L+L G +++  ++K++A++RWS++L  L + +  +++
Sbjct:  305 YQEDREITAMMALRQAYDANELAKFERTLREDRNRILDDPFIMSYIEPLRHKMREQVLISLVQPYNKVSMKFLSQELKMEGKEVEQLIVNMILDGRFEGKIDQINGVLVLGGQKQSIATKKYEALQRWSDALEGLRNALPQKIQ 448          
BLAST of mRNA_Ecto-sp13_S_contig6850.17808.1 vs. uniprot
Match: A0A7S2W4K8_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4K8_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.620e-42
Identity = 78/135 (57.78%), Postives = 97/135 (71.85%), Query Frame = 0
Query:   15 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPQETATSRKHDAMERWSNSLRSL 149
            FQEEKEIVAM  LR AYE NDL  FE TL DK NRI EDPF+MTY+ PLR+R+RE VL+ L +PY +I + F+A EL L   EVE+L++D+IL+ R+ GKIDQI+GFLLL         +K DAM  W+ SL +L
Sbjct:  352 FQEEKEIVAMRSLRTAYEANDLTTFESTLKDKSNRILEDPFIMTYVAPLRRRMREQVLLALVRPYHRIQLSFIARELELSDEEVERLVVDMILEGRVQGKIDQIKGFLLLGDRSNVLAVKKFDAMASWAKSLEAL 486          
BLAST of mRNA_Ecto-sp13_S_contig6850.17808.1 vs. uniprot
Match: A0A836CJA4_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA4_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.260e-40
Identity = 70/143 (48.95%), Postives = 106/143 (74.13%), Query Frame = 0
Query:   15 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARV 157
            +QEEKE+ AMM+LRMAYE NDLA+FE+TL +K NRI +D F+M Y+ PL++R+RE VL+ + +PY++I + FMA EL+L    VE LL++LILD RL+G IDQ++GFL +       + +K++A+  WS+ LR  ++ + +R+
Sbjct:  265 YQEEKEVAAMMELRMAYETNDLARFEKTLQNKANRILDDNFIMAYVEPLKRRMREQVLLAIVRPYRRINLAFMARELNLPEPAVEGLLVELILDERLSGSIDQLQGFLQVGEDDADNSPKKYEALMGWSDELRKATTALTSRI 407          
BLAST of mRNA_Ecto-sp13_S_contig6850.17808.1 vs. uniprot
Match: A0A7S2V3G5_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3G5_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.790e-39
Identity = 72/160 (45.00%), Postives = 109/160 (68.12%), Query Frame = 0
Query:   15 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLD---------GPQETATS-------RKHDAMERWSNSLRSLSSFVAARVE 158
            +Q+ +EI+ MM+LR AY+ +DL +FERTL D+RNRI +DPF+M Y+ PLRQR+RE V++ LC+PYK I +  +A EL+ +  EVEK+++ +ILD RL+GKIDQI   LLL+            ET ++       +K+DA+ +W+ S+ SLS  +  R++
Sbjct:   59 YQDAQEILGMMELRAAYDASDLGRFERTLRDRRNRILDDPFIMAYVAPLRQRMREQVVLRLCRPYKCILLKTLAKELAQEVQEVEKIVVAMILDGRLSGKIDQIAQALLLNKSFGSTAGSSSSETGSALTLSSNTKKYDALNQWTASVESLSQCIGERMQ 218          
BLAST of mRNA_Ecto-sp13_S_contig6850.17808.1 vs. uniprot
Match: W7U093_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U093_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.150e-35
Identity = 65/133 (48.87%), Postives = 100/133 (75.19%), Query Frame = 0
Query:   15 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPQETATSRKHDAMERWSNSLR 147
            +Q+++E++AMM+LR+AY+ NDL +FERTL  K N I +D F+  Y+  LR+R+RE VL+ + +PY K+T+  +A EL L   E+E LL+DLILD+R+ G+IDQI GF+LL  P+  ++S KH A+ RW+++L+
Sbjct:  307 YQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLLR-PEGRSSSGKHAALARWADALQ 438          
BLAST of mRNA_Ecto-sp13_S_contig6850.17808.1 vs. uniprot
Match: A0A7S3M6V7_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6V7_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.170e-35
Identity = 62/111 (55.86%), Postives = 91/111 (81.98%), Query Frame = 0
Query:   15 FQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLD 125
            F ++KEIVAM DLR   E NDLA+FERT+ +K+N+I ++PF+MTY+ PLR+R+RE VL++L +PYKK+T+ F+A EL+L   EVE LL+D+ILD++L+  IDQI+G ++L+
Sbjct:  212 FSDDKEIVAMSDLRQCLEANDLARFERTIKNKQNKILDEPFLMTYIQPLRRRMREQVLLNLTRPYKKVTVAFLARELALNVDEVESLLVDMILDQKLSAHIDQIKGHVILE 322          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6850.17808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR5_ECTSI2.350e-9398.62COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6H5JKQ1_9PHAE1.070e-9197.93COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A7S2B813_9STRA3.590e-5057.34COP9 signalosome complex subunit 2 n=1 Tax=Florenc... [more]
A0A7S2BKS2_9STRA3.240e-4755.94COP9 signalosome complex subunit 2 n=1 Tax=Dictyoc... [more]
A0A6V1ITC2_HETAK3.790e-4348.61COP9 signalosome complex subunit 2 n=1 Tax=Heteros... [more]
A0A7S2W4K8_9STRA1.620e-4257.78COP9 signalosome complex subunit 2 n=2 Tax=Rhizoch... [more]
A0A836CJA4_9STRA1.260e-4048.95COP9 signalosome complex subunit 2 n=1 Tax=Tribone... [more]
A0A7S2V3G5_9STRA1.790e-3945.00COP9 signalosome complex subunit 2 n=1 Tax=Fibroca... [more]
W7U093_9STRA1.150e-3548.87COP9 signalosome complex subunit 2 n=2 Tax=Monodop... [more]
A0A7S3M6V7_9STRA1.170e-3555.86COP9 signalosome complex subunit 2 n=1 Tax=Spumell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00753PINTcoord: 58..145
e-value: 3.1E-11
score: 53.3
NoneNo IPR availableGENE3D1.25.40.570coord: 1..157
e-value: 5.6E-34
score: 119.8
NoneNo IPR availablePANTHERPTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 11..155
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 58..145
e-value: 3.1E-11
score: 53.3
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 23..122
e-value: 6.5E-19
score: 68.4
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 1..129
score: 19.788
IPR037750COP9 signalosome complex subunit 2PANTHERPTHR10678:SF3COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 11..155
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 53..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6850contigEcto-sp13_S_contig6850:16..1028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6850.17808.1mRNA_Ecto-sp13_S_contig6850.17808.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6850 16..1028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6850.17808.1 ID=prot_Ecto-sp13_S_contig6850.17808.1|Name=mRNA_Ecto-sp13_S_contig6850.17808.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp
MNNTSLPLNRTLRRFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRI
TEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEK
LLIDLILDRRLNGKIDQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLS
SFVAARVEC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR037750COPS2
IPR036390WH_DNA-bd_sf