prot_Ecto-sp13_S_contig6840.17799.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6840.17799.1
Unique Nameprot_Ecto-sp13_S_contig6840.17799.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length208
Homology
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: D7FZ21_ECTSI (GTR2, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ21_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 3.790e-130
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0
Query:    3 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 194
            RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLV+VVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS
Sbjct:   46 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVNVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 237          
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A6H5K2I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2I3_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 1.560e-129
Identity = 191/192 (99.48%), Postives = 191/192 (99.48%), Query Frame = 0
Query:    3 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 194
            RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVN KLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS
Sbjct:   37 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNSKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 228          
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A835Z2X6_9STRA (Gtr1/RagA G protein conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2X6_9STRA)

HSP 1 Score: 228 bits (581), Expect = 8.390e-71
Identity = 114/192 (59.38%), Postives = 145/192 (75.52%), Query Frame = 0
Query:    3 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 194
            RSGK+SIQRVVF KMS HET+FL +T +LDIKYVANN +VQFQIWDFPGD D    +L Y G+ V    IF   + LVL++DAQ++P  E +  LV +V+ A  VNP ++ E+FIHK+DGDL+L+DE K +C R++Q YI   L+ +N D+ L Y+LTSIYDHSIF+  SKVVQ L+PQLPTLEN+LN LIS
Sbjct:    5 RSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFVQFQIWDFPGDVD-LRGELSYGGQPVSEQVIFGASSALVLVIDAQDEPYQEAVMRLVEIVRRAQAVNPNISFEVFIHKVDGDLFLSDEHKIDCQRDIQQYITEELNDANLDVSLSYYLTSIYDHSIFEAFSKVVQKLVPQLPTLENLLNCLIS 195          
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A662WWQ1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWQ1_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.870e-68
Identity = 111/194 (57.22%), Postives = 138/194 (71.13%), Query Frame = 0
Query:    2 DRSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALISV 195
            DRSGKSSIQRVVF KMS HET+FL  T SLDIKY+ANN +VQFQIWDFPGDYD   D L+Y G++V    IF     +V ++DAQ++P  E L  L   V  A   NP +  E+FIHK+DGDL+L+D+ K +C R +Q  I   ++    DI + ++LTSIYDHSIF+  SKVVQ LIPQLPTLEN+LN LI+V
Sbjct:    5 DRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDYD-FKDDLVYGGQLVNEEMIFGNCGSIVFVIDAQDEPYAEALARLHDTVTRAHRYNPDILFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITV 197          
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A6V3AJ62_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3AJ62_HETAK)

HSP 1 Score: 222 bits (565), Expect = 2.630e-68
Identity = 109/192 (56.77%), Postives = 144/192 (75.00%), Query Frame = 0
Query:    3 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 194
            RSGKSSIQRVVF KMS HET+FL +T  LDIK VANN +VQFQIWDFPGDYD   D L+Y G++++  ++F   A L+L++DAQ +P  +    LV V + A   NP++A E+ +HK+DGDL+L+DE K +C R++Q Y+   L+ +N +I L Y+LTSIYDHSIF+  SKVVQ +IPQLPTLEN+LN LI+
Sbjct:   39 RSGKSSIQRVVFNKMSPHETLFLESTSDLDIKLVANNPFVQFQIWDFPGDYDFRGD-LVYGGQLIDEAAVFGQCAALILVIDAQGEPYPDACARLVEVARRAHGHNPRIAFEVLVHKVDGDLFLSDEHKIDCQRDIQQYMTEELNDANLNINLSYYLTSIYDHSIFEAFSKVVQKIIPQLPTLENLLNLLIT 229          
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A485LVW5_9STRA (Aste57867_24885 protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A485LVW5_9STRA)

HSP 1 Score: 219 bits (557), Expect = 3.660e-67
Identity = 110/192 (57.29%), Postives = 136/192 (70.83%), Query Frame = 0
Query:    3 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 194
            RSGKSSIQRVVF KMS HET+FL  T SLDIKY+ANN +VQFQIWDFPGD+D   D L+Y G++V    IF     +V ++DAQ+DP  E L  L   V  A   NP +  E+FIHK+DGDL+L+D+ K +C R++Q  I   +     DI + ++LTSIYDHSIF+  SKVVQ LIPQLPTLEN+LN LIS
Sbjct:   43 RSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFD-FKDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDDPYVEALARLHDTVARAHRYNPNIFFEVFIHKVDGDLFLSDDHKIDCQRDIQQQITEEIQDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILIS 233          
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A662Y1U3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1U3_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.500e-66
Identity = 112/199 (56.28%), Postives = 138/199 (69.35%), Query Frame = 0
Query:    2 DRSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYD-----PANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALISV 195
            DRSGKSSIQRVVF KMS HET+FL  T SLDIKY+ANN +VQFQIWDFPGDYD        D L+Y G++V    IF     +V I+DAQ++P  E L  L   V  A   NP +  E+FIHK+DGDL+L+D+ K +C R +Q  I   ++    DI + ++LTSIYDHSIF+  SKVVQ LIPQLPTLEN+LN LI+V
Sbjct:   58 DRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDYDFKGLAAMADDLVYGGQLVNEEMIFGNCGSIVFIIDAQDEPYAEALARLHDTVTRAHRYNPDILFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITV 256          
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A2D4CEL7_PYTIN (Ras-like GTP-binding protein n=36 Tax=Oomycota TaxID=4762 RepID=A0A2D4CEL7_PYTIN)

HSP 1 Score: 214 bits (544), Expect = 3.500e-65
Identity = 108/192 (56.25%), Postives = 136/192 (70.83%), Query Frame = 0
Query:    3 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 194
            RSGKSSIQRVVF KMS HET+FL  T SLDIKY+ANN +VQFQIWDFPGD+D   D L+Y G++V    IF     +V ++DAQ++P  E L  L   V  A   NP +  E+FIHK+DGDL+L+D+ K +C R +Q  I   ++    DI + ++LTSIYDHSIF+  SKVVQ LIPQLPTLEN+LN LI+
Sbjct:   42 RSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFDFKED-LVYGGQLVNEEMIFGNCGSIVFVIDAQDEPYAEALARLHDTVLRAHRYNPDIFFEVFIHKVDGDLFLSDDHKIDCQREIQQQITDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILIT 232          
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A067CD50_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CD50_SAPPC)

HSP 1 Score: 211 bits (537), Expect = 3.640e-64
Identity = 104/192 (54.17%), Postives = 136/192 (70.83%), Query Frame = 0
Query:    3 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 194
            RSGKSSIQRVVF KMS HET+FL  T +LDIKY+ANN +VQFQIWDFPGD++   D L+Y G++V    IF     +V ++DAQ++P  + L  L   V  A   NP +  E+FIHK+DGDL+++D+ K +C R +Q  +   ++    DI + ++LTSIYDHSIF+  SKVVQ LIPQLPTLEN+LN LIS
Sbjct:   41 RSGKSSIQRVVFHKMSPHETLFLEGTNTLDIKYIANNSFVQFQIWDFPGDFE-FKDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDEPYSDALSRLHDTVTRAHHYNPNIFFEVFIHKVDGDLFVSDDHKIDCQREIQQQVLDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILIS 231          
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: F0WY86_9STRA (Raslike GTPbinding protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WY86_9STRA)

HSP 1 Score: 211 bits (537), Expect = 3.640e-64
Identity = 103/192 (53.65%), Postives = 140/192 (72.92%), Query Frame = 0
Query:    3 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 194
            RSGKSSIQRVVF KMS HET+F   T SLDIKY+ANN +VQFQIWDFPGD++   D LMY G++V    IF+    +V+++DAQ++P  E L  L  ++  A   N ++  E+FIHK+DGDL+++D+ K +C R +Q  I   ++ +  DI + ++LTSIYDHSIF+ +SKVVQ LIPQLPT+EN+LN LI+
Sbjct:   42 RSGKSSIQRVVFHKMSPHETLFSEGTSSLDIKYIANNPFVQFQIWDFPGDFE-FKDDLMYGGQLVNEDMIFSNCGSIVIVIDAQDEPYTEALARLHDIILRAHRYNSEIFFEVFIHKVDGDLFISDDHKIDCQREIQHQIMEEINDTELDIHMSFYLTSIYDHSIFEAVSKVVQKLIPQLPTMENLLNILIT 232          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ21_ECTSI3.790e-13099.48GTR2, Ras superfamily GTPase n=1 Tax=Ectocarpus si... [more]
A0A6H5K2I3_9PHAE1.560e-12999.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z2X6_9STRA8.390e-7159.38Gtr1/RagA G protein conserved region-domain-contai... [more]
A0A662WWQ1_9STRA1.870e-6857.22Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A6V3AJ62_HETAK2.630e-6856.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A485LVW5_9STRA3.660e-6757.29Aste57867_24885 protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A662Y1U3_9STRA2.500e-6656.28Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A2D4CEL7_PYTIN3.500e-6556.25Ras-like GTP-binding protein n=36 Tax=Oomycota Tax... [more]
A0A067CD50_SAPPC3.640e-6454.17Uncharacterized protein n=5 Tax=Saprolegniaceae Ta... [more]
F0WY86_9STRA3.640e-6453.65Raslike GTPbinding protein putative n=2 Tax=Albugo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..182
e-value: 9.2E-47
score: 160.9
NoneNo IPR availablePANTHERPTHR11259:SF2GH16429Pcoord: 2..194
IPR006762Gtr1/RagA G proteinPFAMPF04670Gtr1_RagAcoord: 3..194
e-value: 2.2E-42
score: 145.0
IPR006762Gtr1/RagA G proteinPANTHERPTHR11259RAS-RELATED GTP BINDING RAG/GTR YEASTcoord: 2..194
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6840contigEcto-sp13_S_contig6840:3982..7712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6840.17799.1mRNA_Ecto-sp13_S_contig6840.17799.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6840 3982..7712 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6840.17799.1 ID=prot_Ecto-sp13_S_contig6840.17799.1|Name=mRNA_Ecto-sp13_S_contig6840.17799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp
MDRSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFP
GDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSV
VKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSN
TDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALISVRISRP
NVHVPAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006762Gtr1_RagA
IPR027417P-loop_NTPase