mRNA_Ecto-sp13_S_contig6840.17799.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6840.17799.1
Unique NamemRNA_Ecto-sp13_S_contig6840.17799.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: D7FZ21_ECTSI (GTR2, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ21_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 3.790e-130
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 1 
Query:    7 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 582
            RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLV+VVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS
Sbjct:   46 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVNVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 237
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BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A6H5K2I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2I3_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 1.560e-129
Identity = 191/192 (99.48%), Postives = 191/192 (99.48%), Query Frame = 1 
Query:    7 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 582
            RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVN KLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS
Sbjct:   37 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNSKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 228
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BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A835Z2X6_9STRA (Gtr1/RagA G protein conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2X6_9STRA)

HSP 1 Score: 228 bits (581), Expect = 8.390e-71
Identity = 114/192 (59.38%), Postives = 145/192 (75.52%), Query Frame = 1 
Query:    7 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 582
            RSGK+SIQRVVF KMS HET+FL +T +LDIKYVANN +VQFQIWDFPGD D    +L Y G+ V    IF   + LVL++DAQ++P  E +  LV +V+ A  VNP ++ E+FIHK+DGDL+L+DE K +C R++Q YI   L+ +N D+ L Y+LTSIYDHSIF+  SKVVQ L+PQLPTLEN+LN LIS
Sbjct:    5 RSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFVQFQIWDFPGDVD-LRGELSYGGQPVSEQVIFGASSALVLVIDAQDEPYQEAVMRLVEIVRRAQAVNPNISFEVFIHKVDGDLFLSDEHKIDCQRDIQQYITEELNDANLDVSLSYYLTSIYDHSIFEAFSKVVQKLVPQLPTLENLLNCLIS 195
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BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A662WWQ1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWQ1_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.870e-68
Identity = 111/194 (57.22%), Postives = 138/194 (71.13%), Query Frame = 1 
Query:    4 DRSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALISV 585
            DRSGKSSIQRVVF KMS HET+FL  T SLDIKY+ANN +VQFQIWDFPGDYD   D L+Y G++V    IF     +V ++DAQ++P  E L  L   V  A   NP +  E+FIHK+DGDL+L+D+ K +C R +Q  I   ++    DI + ++LTSIYDHSIF+  SKVVQ LIPQLPTLEN+LN LI+V
Sbjct:    5 DRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDYD-FKDDLVYGGQLVNEEMIFGNCGSIVFVIDAQDEPYAEALARLHDTVTRAHRYNPDILFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITV 197
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BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A6V3AJ62_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3AJ62_HETAK)

HSP 1 Score: 222 bits (565), Expect = 2.630e-68
Identity = 109/192 (56.77%), Postives = 144/192 (75.00%), Query Frame = 1 
Query:    7 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 582
            RSGKSSIQRVVF KMS HET+FL +T  LDIK VANN +VQFQIWDFPGDYD   D L+Y G++++  ++F   A L+L++DAQ +P  +    LV V + A   NP++A E+ +HK+DGDL+L+DE K +C R++Q Y+   L+ +N +I L Y+LTSIYDHSIF+  SKVVQ +IPQLPTLEN+LN LI+
Sbjct:   39 RSGKSSIQRVVFNKMSPHETLFLESTSDLDIKLVANNPFVQFQIWDFPGDYDFRGD-LVYGGQLIDEAAVFGQCAALILVIDAQGEPYPDACARLVEVARRAHGHNPRIAFEVLVHKVDGDLFLSDEHKIDCQRDIQQYMTEELNDANLNINLSYYLTSIYDHSIFEAFSKVVQKIIPQLPTLENLLNLLIT 229
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BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A485LVW5_9STRA (Aste57867_24885 protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A485LVW5_9STRA)

HSP 1 Score: 219 bits (557), Expect = 3.660e-67
Identity = 110/192 (57.29%), Postives = 136/192 (70.83%), Query Frame = 1 
Query:    7 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 582
            RSGKSSIQRVVF KMS HET+FL  T SLDIKY+ANN +VQFQIWDFPGD+D   D L+Y G++V    IF     +V ++DAQ+DP  E L  L   V  A   NP +  E+FIHK+DGDL+L+D+ K +C R++Q  I   +     DI + ++LTSIYDHSIF+  SKVVQ LIPQLPTLEN+LN LIS
Sbjct:   43 RSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFD-FKDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDDPYVEALARLHDTVARAHRYNPNIFFEVFIHKVDGDLFLSDDHKIDCQRDIQQQITEEIQDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILIS 233
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BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A662Y1U3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1U3_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.500e-66
Identity = 112/199 (56.28%), Postives = 138/199 (69.35%), Query Frame = 1 
Query:    4 DRSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYD-----PANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALISV 585
            DRSGKSSIQRVVF KMS HET+FL  T SLDIKY+ANN +VQFQIWDFPGDYD        D L+Y G++V    IF     +V I+DAQ++P  E L  L   V  A   NP +  E+FIHK+DGDL+L+D+ K +C R +Q  I   ++    DI + ++LTSIYDHSIF+  SKVVQ LIPQLPTLEN+LN LI+V
Sbjct:   58 DRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDYDFKGLAAMADDLVYGGQLVNEEMIFGNCGSIVFIIDAQDEPYAEALARLHDTVTRAHRYNPDILFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITV 256
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BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A2D4CEL7_PYTIN (Ras-like GTP-binding protein n=36 Tax=Oomycota TaxID=4762 RepID=A0A2D4CEL7_PYTIN)

HSP 1 Score: 214 bits (544), Expect = 3.500e-65
Identity = 108/192 (56.25%), Postives = 136/192 (70.83%), Query Frame = 1 
Query:    7 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 582
            RSGKSSIQRVVF KMS HET+FL  T SLDIKY+ANN +VQFQIWDFPGD+D   D L+Y G++V    IF     +V ++DAQ++P  E L  L   V  A   NP +  E+FIHK+DGDL+L+D+ K +C R +Q  I   ++    DI + ++LTSIYDHSIF+  SKVVQ LIPQLPTLEN+LN LI+
Sbjct:   42 RSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFDFKED-LVYGGQLVNEEMIFGNCGSIVFVIDAQDEPYAEALARLHDTVLRAHRYNPDIFFEVFIHKVDGDLFLSDDHKIDCQREIQQQITDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILIT 232
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BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: A0A067CD50_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CD50_SAPPC)

HSP 1 Score: 211 bits (537), Expect = 3.640e-64
Identity = 104/192 (54.17%), Postives = 136/192 (70.83%), Query Frame = 1 
Query:    7 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 582
            RSGKSSIQRVVF KMS HET+FL  T +LDIKY+ANN +VQFQIWDFPGD++   D L+Y G++V    IF     +V ++DAQ++P  + L  L   V  A   NP +  E+FIHK+DGDL+++D+ K +C R +Q  +   ++    DI + ++LTSIYDHSIF+  SKVVQ LIPQLPTLEN+LN LIS
Sbjct:   41 RSGKSSIQRVVFHKMSPHETLFLEGTNTLDIKYIANNSFVQFQIWDFPGDFE-FKDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDEPYSDALSRLHDTVTRAHHYNPNIFFEVFIHKVDGDLFVSDDHKIDCQREIQQQVLDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILIS 231
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BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Match: F0WY86_9STRA (Raslike GTPbinding protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WY86_9STRA)

HSP 1 Score: 211 bits (537), Expect = 3.640e-64
Identity = 103/192 (53.65%), Postives = 140/192 (72.92%), Query Frame = 1 
Query:    7 RSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALIS 582
            RSGKSSIQRVVF KMS HET+F   T SLDIKY+ANN +VQFQIWDFPGD++   D LMY G++V    IF+    +V+++DAQ++P  E L  L  ++  A   N ++  E+FIHK+DGDL+++D+ K +C R +Q  I   ++ +  DI + ++LTSIYDHSIF+ +SKVVQ LIPQLPT+EN+LN LI+
Sbjct:   42 RSGKSSIQRVVFHKMSPHETLFSEGTSSLDIKYIANNPFVQFQIWDFPGDFE-FKDDLMYGGQLVNEDMIFSNCGSIVIVIDAQDEPYTEALARLHDIILRAHRYNSEIFFEVFIHKVDGDLFISDDHKIDCQREIQHQIMEEINDTELDIHMSFYLTSIYDHSIFEAVSKVVQKLIPQLPTMENLLNILIT 232
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6840.17799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ21_ECTSI3.790e-13099.48GTR2, Ras superfamily GTPase n=1 Tax=Ectocarpus si... [more]
A0A6H5K2I3_9PHAE1.560e-12999.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z2X6_9STRA8.390e-7159.38Gtr1/RagA G protein conserved region-domain-contai... [more]
A0A662WWQ1_9STRA1.870e-6857.22Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A6V3AJ62_HETAK2.630e-6856.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A485LVW5_9STRA3.660e-6757.29Aste57867_24885 protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A662Y1U3_9STRA2.500e-6656.28Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A2D4CEL7_PYTIN3.500e-6556.25Ras-like GTP-binding protein n=36 Tax=Oomycota Tax... [more]
A0A067CD50_SAPPC3.640e-6454.17Uncharacterized protein n=5 Tax=Saprolegniaceae Ta... [more]
F0WY86_9STRA3.640e-6453.65Raslike GTPbinding protein putative n=2 Tax=Albugo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6840contigEcto-sp13_S_contig6840:3982..7712 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score381.3
Seed ortholog evalue2.8e-103
Seed eggNOG ortholog2880.D7FZ21
Preferred nameRRAGD
Model size624
KEGG koko:K16186
KEGG Pathwayko04140,ko04150,map04140,map04150
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000228,GO:0000287,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000785,GO:0000790,GO:0001101,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005764,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006396,GO:0006725,GO:0006807,GO:0006914,GO:0006915,GO:0006950,GO:0006995,GO:0007049,GO:0007050,GO:0007154,GO:0007165,GO:0007264,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008340,GO:0008380,GO:0009056,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010243,GO:0010259,GO:0010467,GO:0010468,GO:0010506,GO:0010507,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010648,GO:0012501,GO:0012505,GO:0015630,GO:0016020,GO:0016021,GO:0016049,GO:0016070,GO:0016237,GO:0016241,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0018130,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022402,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0031090,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0032006,GO:0032007,GO:0032008,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032774,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0034198,GO:0034448,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035639,GO:0036094,GO:0040007,GO:0042221,GO:0042594,GO:0043085,GO:0043087,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043200,GO:0043201,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043547,GO:0043562,GO:0044087,GO:0044088,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045786,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046872,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051020,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051726,GO:0060255,GO:0061919,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0071229,GO:0071230,GO:0071233,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0072657,GO:0072665,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098852,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902115,GO:1902531,GO:1902532,GO:1902533,GO:1902680,GO:1903432,GO:1903506,GO:1903508,GO:1903778,GO:1904262,GO:1904263,GO:1990131,GO:1990253,GO:1990928,GO:2000112,GO:2000785,GO:2001141
Exons6
EggNOG free text desc.regulation of TORC1 signaling
EggNOG OGsKOG3887@1,KOG3887@2759
Ec32 ortholog descriptionGTR2, Ras superfamily GTPase
Ec32 orthologEc-20_001250.1
Cds size624
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6840.17799.1prot_Ecto-sp13_S_contig6840.17799.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6840 3982..7712 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463940.3639677-CDS-Ecto-sp13_S_contig6840:3981..41151681463940.3639677-CDS-Ecto-sp13_S_contig6840:3981..4115Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6840 3982..4115 -
1681463940.3768916-CDS-Ecto-sp13_S_contig6840:4537..46701681463940.3768916-CDS-Ecto-sp13_S_contig6840:4537..4670Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6840 4538..4670 -
1681463940.3877132-CDS-Ecto-sp13_S_contig6840:4899..49981681463940.3877132-CDS-Ecto-sp13_S_contig6840:4899..4998Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6840 4900..4998 -
1681463940.3979955-CDS-Ecto-sp13_S_contig6840:5973..60591681463940.3979955-CDS-Ecto-sp13_S_contig6840:5973..6059Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6840 5974..6059 -
1681463940.4078894-CDS-Ecto-sp13_S_contig6840:6967..70641681463940.4078894-CDS-Ecto-sp13_S_contig6840:6967..7064Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6840 6968..7064 -
1681463940.4202442-CDS-Ecto-sp13_S_contig6840:7637..77121681463940.4202442-CDS-Ecto-sp13_S_contig6840:7637..7712Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6840 7638..7712 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6840.17799.1

>prot_Ecto-sp13_S_contig6840.17799.1 ID=prot_Ecto-sp13_S_contig6840.17799.1|Name=mRNA_Ecto-sp13_S_contig6840.17799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp
MDRSGKSSIQRVVFQKMSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFP
GDYDPANDKLMYNGEMVEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSV
VKNACLVNPKLAVEIFIHKIDGDLYLTDEPKEECLRNVQSYINAALSWSN
TDIRLRYHLTSIYDHSIFDGLSKVVQLLIPQLPTLENMLNALISVRISRP
NVHVPAD*
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mRNA from alignment at Ecto-sp13_S_contig6840:3982..7712-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6840.17799.1 ID=mRNA_Ecto-sp13_S_contig6840.17799.1|Name=mRNA_Ecto-sp13_S_contig6840.17799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3731bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6840:3982..7712- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACAGATCCGGTAAATCTTCGATCCAGCGAGTGGTGTTCCAGAAGAT
GTCTGCCCACGAGACCATGTTCCTCGTGAGTATCGATGTGCTGGTGGTTC
GTTAGTCTGGCGTGAGCAGCAATACCGTGCTTCTAGTTGTTGCTCGCAGG
TGCAAAGTTTGCTTCAGAGCGTCGGTTGAGATTCCGTCCCTCCTCCTGCG
TTGGTCCCAATTACGATCGAGCTCCGCGCACGCAAACAGCACCAAGCACG
GCAGTCGCTTGAAGCGTGTACTTGTCCCAAGAATTTCGTCCTGTCAAACT
GCATAGAACCACGCCTCCTCTTCACGTGGGGGCTACCCGACCGGCCTCTC
TCCTCACTTCTGTTTGTTAGTACAGAAACATGTACTCTCTCACGGGGTTA
TGCACGAGGATCACTGGGCATTGGCCGTAAGTTGGGCCTTGCGAAGCAGG
TTTTTTTCGGACCGACACGCCAAGAGGTGCCCCACCACCATGTATCAAAT
AAGCCCCGCGGTTTTTGTCCGGTTGATTGTTGCACCAGCAGTGTCTACAC
TCGAGGGGCACAACCCAGGTAGGTCCCTCCATAGGTTGCGACGAAGTCCT
GATCACCACCCCACCCCCCGTCCAACCGCGTATCATACTTGGTGTCAGGG
CAACACTCAAAGCCTGGACATCAAGTACGTGGCCAACAACGACTACGTAC
AGTTCCAGATCTGGGATTTTCCCGGAGACTACGACCCCGCCAACGGTAAG
GCGTTCCAAGGTGGTGGAAACCCCCTGCCTGCCTTGCTTCCTTCTCGCCT
TATGCATACTGCTGTTGTCTCACGGAAGTTTTTTTTTTTAATTGTTTTTC
AGCACCGACGGGGGAATTGAATGAATTATTCACGAGGTATATGTACCGTA
CGGGTTTGGTTGGGGCCGGAGAGGAGTTTTTTTGTTGTTTCGTGTATTTC
TTTTCCTACACGCGGGCACAAGCGCTGCTGCTTTGTTTTTGTTCTCTGCT
CTTCAGTTTTTCTCCACTCGTTTGTTGAGTCGTTCGTTTCCTGCAAGCGG
GAACAAGCGGTGCTGTTTTTTTTGCTTGTCTGCTCTTATTTACTTTTGCT
CCACTCGTTAGTTAAGTTGTACACGAGGCACGAAAGAAATGGAGACAACG
CACGAGGGGGGGCTGAAAACCGAACAGAAGCGTCATGCAGTAAATAGGCG
TTTCATGTCAACCTTGTTACTTGGTAGTGTTTTCGTTGGCGGCCCGCTGG
TAAGACACTGCTTGGCTCGGTGTGCGTGTACTTCACGCGGTAAAAAATCG
CCAAGCTGAGATTCATATCCACTGAACAAAAGAAAGCGAAGGACGTTGTG
TTATTTCGAATTCCCTGTCTCAAGAACGTTCTCTGCGGCTTTCGTACGGC
AAGGCTTGTTGATGTCGAAACCCCGCCTGCTTTCTTCGTGACAAAACCCT
CACATCTGCCTGATTTTTTCCTGCGTTTTTTTGTGTTTCACAGCTCCCAG
ACGATACCCTTCATTTTCCCTCCGTTTGAAAGACGAAAACTCGGCGTTGG
CCTATTGATGAACCTACTCTCCCCCCCCCCCCACGCGCGCGCGTGTTATC
GTCGTTGTTGCTGTTTTGGTGGTCTGAAAATTATCGCTTTGGGAACAAGC
CAGACAAGTTGATGTACAACGGTGAGATGGTAGAGGCGACGTCCATCTTT
ACGGGGGTGGCGGTCCTGGTCCTGATTGTCGACGCACAGGTGAAAGAGAC
GAGATGAGATACAGCATATTAGTCGTGGGTCCTGTCTCCTTACGGTGCTG
GTTGTAGTGCAGTGTTGGTGGTTGGGTAGGAAGAGCCGGCGAACTCTCTC
GGCGCAGGTTGAATTGTGATAACTCGTTTTTTTGTGTCTTTTTTTTTTGT
GGCATCGGTAGAGTGAGCGGGGGAATCGGCCTGGTGTATATAAACGATAA
GTTAATAGGGACCCCCGACTGTGAGTGACAAGAAGGTAAAAGCCGCTCGT
GTGGACAGCGTCCTTGATATCTTCCAACAACGTCACGTGAGGGCATGATG
TCGTCATGTCTCGTGCTTGGGCGATGTATGTCCGACGGAAGGGTGTCATG
CCTACAAAACCATGCAGACACATCAATTTCGTGTTCAGCTTGGAACAGTT
AGTCTTCGTTTTTGTTGCGGGGTATTTGTCGCATGTCTTTCTCTTGCGAT
AGTGCCAGCCCCTTCTTGGTCCGCAGGGAAGACAGCATTCGTTGTTGAAG
CGTCGTGTGTTCGTTTCTTGCTTCTTGCAAGTGCCATCTCTCTCTTGTCC
CTCTCTCTCTCTGAGTCACATGAAAGCACATCTTTGCTAGAACACCGTTT
CTTTTGTGTGTGTGTTGTTTTTTGTTGAGGCTCCCGTCGCCACTTTTCCC
TGCTTGCCTATCCTATACCCCATTCGTCCATAGGATACATCAAGTCGATA
GTTGTCCCGCTGTGCCCTTTTTCGTCGCCCCCTGCTTGTGTGTCTCGTGT
ACCCCTTTCAAGATCACAGGATTGTCCGTACCCTTTTTTGGTCACCCCGT
GACTGTGTCTTCCGCTCACCCTTTTTAGCGACAGGATTATCCAGTCAAGG
GAGGGGCTCTGCTCTTTTTTACCATGCCTTATGCGGCGTCACCGCCCCTA
TAGTTTTTTTCATCCAACACGAGCCGACCATGTGGTTTCATGTACCCTTT
TCTTGTTTTGTCAGGAGGATCCAATCGACGAGCAATTAGGCGGTCTGGTG
AGCGTCGTCAAGAACGCCTGCCTCGTCAACCCCAAGCTGGCTGTCGAAAT
CTTCATACACAAGGTATCGGAGGGGTGGCCATTTTTTCGAACGTGGGCTT
AGCAAGCGTGCCTTCATTGACGTGGAGCATTTTTTCTCAAGACGTTGACC
AAGATGCACCACCTCCTTCTTGTGTTAAATCCTTACAAGAGTTGGTCCGC
GAAACACCGAAACGAAGCTAGCCCCCAAAGCACCGAAGTGTAGTGTTAAT
TATTTTGTTTGTTGGTACCGTGTCATGGGTCGAACGCGCCAGATTGACGG
AGACCTTTACTTGACTGACGAGCCCAAGGAGGAGTGTCTGCGAAACGTCC
AGAGCTACATTAACGCGGCCTTGTCGTGGAGCAACACCGACATCAGGCTG
CGATACCACCTCACCAGCATCTACGGTAAGCACGGTGTTGGGTTTGACGG
GCATTGCTGGTGGTTTCCGACGGGTGTTGTTGGTGGTCGTTTTTTCGTTG
CCGTTGATGTTGATGACGATGATGGTGTCGCTCCCGATGTTGTGATTGCT
TTTGCAAAGGTTGGTTGTGTGATTTTTGCCGGTGTTGTGCTTGCCCTTGT
CTACGGTCTGTGCTTTTCGATGTTCGGTGGGTTTCATTCCCTCATTTCGC
GTTTGAACGCGCTGGGCTCATGGCAACATGTTGTTGTGCCTTTTTTGTGG
TTGCTGTGGCCCGCTTGGTTGAAGAGATGCGCATCGGAAACGTCTTCTCA
CGTTGACAATCCAAATAGAGCCGTGCCACCCTGCACTCTTGCCCTAGCCC
CAGTCTTGCACGTAAGCCACTGACAACCTTGCCTGTGTGTTTGGCAGATC
ACAGCATTTTCGATGGTCTCAGCAAGGTGGTGCAACTCCTCATCCCGCAG
CTGCCCACGCTGGAGAACATGCTCAACGCCCTCATCTCTGTAAGAATCTC
TCGACCAAATGTACATGTACCGGCAGACTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6840:3982..7712-

>mRNA_Ecto-sp13_S_contig6840.17799.1 ID=mRNA_Ecto-sp13_S_contig6840.17799.1|Name=mRNA_Ecto-sp13_S_contig6840.17799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=624bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6840:3982..7712- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACAGATCCGGTAAATCTTCGATCCAGCGAGTGGTGTTCCAGAAGAT
GTCTGCCCACGAGACCATGTTCCTCGGCAACACTCAAAGCCTGGACATCA
AGTACGTGGCCAACAACGACTACGTACAGTTCCAGATCTGGGATTTTCCC
GGAGACTACGACCCCGCCAACGACAAGTTGATGTACAACGGTGAGATGGT
AGAGGCGACGTCCATCTTTACGGGGGTGGCGGTCCTGGTCCTGATTGTCG
ACGCACAGGAGGATCCAATCGACGAGCAATTAGGCGGTCTGGTGAGCGTC
GTCAAGAACGCCTGCCTCGTCAACCCCAAGCTGGCTGTCGAAATCTTCAT
ACACAAGATTGACGGAGACCTTTACTTGACTGACGAGCCCAAGGAGGAGT
GTCTGCGAAACGTCCAGAGCTACATTAACGCGGCCTTGTCGTGGAGCAAC
ACCGACATCAGGCTGCGATACCACCTCACCAGCATCTACGATCACAGCAT
TTTCGATGGTCTCAGCAAGGTGGTGCAACTCCTCATCCCGCAGCTGCCCA
CGCTGGAGAACATGCTCAACGCCCTCATCTCTGTAAGAATCTCTCGACCA
AATGTACATGTACCGGCAGACTGA
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