prot_Ecto-sp13_S_contig6840.17798.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6840.17798.1
Unique Nameprot_Ecto-sp13_S_contig6840.17798.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length55
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6840.17798.1 vs. uniprot
Match: A0A6H5K2I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2I3_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 2.210e-27
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 0 
Query:    1 MQEDHFNDKEGLIEYNVNCFKETLEEVFRPLPMPRPRRKGARSSAVGAPGSGRP 54
            MQ DHFNDKEGLIEYNVNCFKETLEEVFRPLPMPRPRRKGARSSA GAPGSGRP
Sbjct:  317 MQADHFNDKEGLIEYNVNCFKETLEEVFRPLPMPRPRRKGARSSAAGAPGSGRP 370
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BLAST of mRNA_Ecto-sp13_S_contig6840.17798.1 vs. uniprot
Match: D7FZ21_ECTSI (GTR2, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ21_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 6.660e-17
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0 
Query:    1 MQEDHFNDKEGLIEYNVNCFKETLEEVFRPLPMPRPRRK 39
            MQ DHFNDKEGLIEYNVNCFKETL EVFRPLPMPRPRRK
Sbjct:  274 MQADHFNDKEGLIEYNVNCFKETLGEVFRPLPMPRPRRK 312
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6840.17798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2I3_9PHAE2.210e-2796.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ21_ECTSI6.660e-1794.87GTR2, Ras superfamily GTPase n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6840contigEcto-sp13_S_contig6840:100..677 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6840.17798.1mRNA_Ecto-sp13_S_contig6840.17798.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6840 100..677 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6840.17798.1 ID=prot_Ecto-sp13_S_contig6840.17798.1|Name=mRNA_Ecto-sp13_S_contig6840.17798.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=55bp
MQEDHFNDKEGLIEYNVNCFKETLEEVFRPLPMPRPRRKGARSSAVGAPG
SGRP*
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