prot_Ecto-sp13_S_contig684.17795.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig684.17795.1
Unique Nameprot_Ecto-sp13_S_contig684.17795.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length648
Homology
BLAST of mRNA_Ecto-sp13_S_contig684.17795.1 vs. uniprot
Match: A0A6H5KZD4_9PHAE (DUF4201 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZD4_9PHAE)

HSP 1 Score: 1147 bits (2968), Expect = 0.000e+0
Identity = 597/656 (91.01%), Postives = 610/656 (92.99%), Query Frame = 0
Query:    1 MIDADVDDTTPDQTNEEAGDVPSQIAAGETCAGVGEALVGDAQEEGSTITRDDLENGDGNGLDVAEDTGGSGLEKGAPEDNAYAPRSEDCVNAADGAGDDLYRRVRELAVEAINAARDTKQLELLFPDEALAVPAMTHCRTMCEHDFLSHWDMAGRKPYQRYSDFAYGQHVSEDVFEFRVNEAAEDEIMNRIKECIEGRLRVDALDQEGGKTNHMLDNKHTHIGIGVHVVDDRLRYAEVYADRYLELLDSPAELSIADEALGFHISVQMTSSDVGPYACLVFHDPVATPLTVGELQQQFNGPYSDFTTSQV--------VSIIWPWQMDVLEDGVFGIPVSVSPIEAGTYYVQILVREDPGSIPYDTDPAGGLPLPGESFCGGALVLRAPEEGEAKMGMSDLDGAGGLLSDNGGGTLEEREARTMASTSALRRDLPPIVRVRVVQDAGGSMQQEASYENKVFMPRERAEDMAQLNLAMEFLRLGAWDDFSSREHTSEGTGTIVDPAVAMKKGQTAGEMKDPNEGGAASEAPVDPDKAATDGHDAPTEALTTPEEATDAGGIATQEEEMKQRIADSGGGXGDGDANDAQQPLLEGERSESADHKLMNGHDAEPEVPWVVTDIAIVRFRGGEKVEPPEDFELVPGDLANPPALDGNGS 648
            MIDADVDDTTPDQTNEEAGDVPSQIAAGE CAGVGEALVGDAQEEGSTITRDDLENG  NGLDVAEDTG SGLEKGAPEDNAYAPRSEDCV+AADGAGDDLYRRVRELAVEAINA      LELL PDEALAVPAMTHCR MCEHDFLSHWDMAGRKPYQRYSDFAYGQHVSEDVFEFRVNEAAEDEIMNRIKECIEGRL  DALDQEGGKTNH+LDNKHTHIGIGVHVVDDRLRYAEVYADRYLELLDSPAELS+AD A G HISVQMTSSDVGPYACLVFHDPVATPLTVGELQQQF+GPYSDFTTSQ         VSIIWPWQMDVLEDGVFGIPVSVSPIEAGTYYVQILVREDPGSIPYDTDP GGLPLPGESFCGGALVLRA EEGEA MGMSDLDGAGGLLS+NGGGTLEEREARTMASTSALRRDLPPIVRVRVVQDAGG MQQEASYE+KVFMPRERAEDMAQLNLAMEFLR GAWDDFSSREHTSEGTGTIVDPAVA K+GQTAGEM+D NEGGAASEAPVDPDKAATDGHDAPTEA TTPEEATD GGIATQE EMKQ IADS G  G+ DA+DA QP +EGE SESADH+LMNGHDAEPEVPWVVTDIAIVRFR GEKVEPPEDFELVPGDLANPPALDG+ S
Sbjct:   12 MIDADVDDTTPDQTNEEAGDVPSQIAAGEPCAGVGEALVGDAQEEGSTITRDDLENGCENGLDVAEDTGWSGLEKGAPEDNAYAPRSEDCVDAADGAGDDLYRRVRELAVEAINA------LELLSPDEALAVPAMTHCRRMCEHDFLSHWDMAGRKPYQRYSDFAYGQHVSEDVFEFRVNEAAEDEIMNRIKECIEGRLGADALDQEGGKTNHLLDNKHTHIGIGVHVVDDRLRYAEVYADRYLELLDSPAELSVADAASGSHISVQMTSSDVGPYACLVFHDPVATPLTVGELQQQFSGPYSDFTTSQTKAWCFIAKVSIIWPWQMDVLEDGVFGIPVSVSPIEAGTYYVQILVREDPGSIPYDTDPVGGLPLPGESFCGGALVLRASEEGEANMGMSDLDGAGGLLSNNGGGTLEEREARTMASTSALRRDLPPIVRVRVVQDAGGRMQQEASYESKVFMPRERAEDMAQLNLAMEFLRWGAWDDFSSREHTSEGTGTIVDPAVATKEGQTAGEMEDLNEGGAASEAPVDPDKAATDGHDAPTEARTTPEEATDPGGIATQETEMKQGIADSEGRGGNDDASDAHQPPVEGEGSESADHELMNGHDAEPEVPWVVTDIAIVRFREGEKVEPPEDFELVPGDLANPPALDGDDS 661          
BLAST of mRNA_Ecto-sp13_S_contig684.17795.1 vs. uniprot
Match: A0A660YHN1_9BACT (SCP domain-containing protein n=2 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A660YHN1_9BACT)

HSP 1 Score: 79.7 bits (195), Expect = 1.240e-12
Identity = 61/200 (30.50%), Postives = 95/200 (47.50%), Query Frame = 0
Query:  101 LYRRVRELAVEA---INAARDTKQLELLFPDEALAVPAMTHCRTMCEHDFLSHWDMAGRKPYQRYSDFAYGQHVSEDV-FEFRVNEAAEDEIMNRIKECIEGRLRVDALDQEGGKTNHMLDNKHTHIGIGVHVVDDRLRYAEVYADRYLELLDSPAELSIADEALGFHISVQMTSSDVGPYACLVFHDPVATPLTVGELQ 296
            + R V+ L  E    IN  R    L  L  DE  A  A  HCR M E  + SHWD++GRKPYQRY+     ++ +E++ F F       D I  R       R  +     E G    +L+  HTH+GIG+    DR+  ++++  RY++    P + +  DE +   +S ++          LVF++P+  P +  EL+
Sbjct:   24 MARHVQTLKEELFSQINRDRARYGLPPLRWDEKAAEVAEEHCREMLEAGYFSHWDLSGRKPYQRYALAGGTEYNAENLGFAFYRPSGPGDHINVRKAAFESYRGMLAERPPEDGHRRTILNPHHTHVGIGIAFSADRVYISQLFLSRYVKFDPPPPKRARPDERIP--LSGEILKEGYSLQGVLVFYEPLPKPRSPEELE 221          
BLAST of mRNA_Ecto-sp13_S_contig684.17795.1 vs. uniprot
Match: A0A7C7L761_9BACT (CAP domain-containing protein n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A7C7L761_9BACT)

HSP 1 Score: 73.9 bits (180), Expect = 1.080e-10
Identity = 56/201 (27.86%), Postives = 94/201 (46.77%), Query Frame = 0
Query:  101 LYRRVRELAVEA---INAARDTKQLELLFPDEALAVPAMTHCRTMCEHDFLSHWDMAGRKPYQRYSDFAYGQHVSEDVFEFRVNEAAEDEIMNRIKECIEG-RLRVDALDQEGGKTNHMLDNKHTHIGIGVHVVDDRLRYAEVYADRYLELLDSPAELSIADEALGFHISVQMTSSDVGPYACLVFHDPVATPLTVGELQQ 297
            + R V  L  E    IN  R    L  L  D   +  A  H R M    + SHWD++GRKPYQRY+     ++ +E++       +   + +N  +   E  R  +       G    +L+  HTH+GIG+     R+  A+++  RY++    P + +  DE    ++S ++       +A LVFH+P+  PL++ EL +
Sbjct:   25 MARHVETLKKELLSQINRDRARYGLSPLRWDGRASRVAEAHAREMLRERYFSHWDLSGRKPYQRYALAGGTEYNAENLGFASCRPSGPGDHINVRRAVFESYRGMLAEKPPNDGHRRSILNPHHTHVGIGLAFDAGRVYIAQLFLSRYVDFSPPPPQRARMDEER-VYLSGRILKKGYSLHAVLVFHEPLPEPLSLWELDR 224          
BLAST of mRNA_Ecto-sp13_S_contig684.17795.1 vs. uniprot
Match: A0A660Y496_9BACT (SCP domain-containing protein (Fragment) n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A660Y496_9BACT)

HSP 1 Score: 67.4 bits (163), Expect = 2.180e-9
Identity = 47/150 (31.33%), Postives = 72/150 (48.00%), Query Frame = 0
Query:  103 RRVRELAVEAINAARDTKQLELLFPDEALAVPAMTHCRTMCEHDFLSHWDMAGRKPYQRYSDFAYGQHVSEDV-FEFRVNEAAEDEIMNRIKECIEGRLRVDALDQEGGKTNHMLDNKHTHIGIGVHVVDDRLRYAEVYADRYLELLDSP 251
            R ++E     IN  R    L  L  DE  A  A  HCR M +  + SHWD++GRKPYQRY+     ++ +E++ F F       D I  R       +  +     E G    +L+  HTH+GIG+    DR+  ++++  RY++    P
Sbjct:   21 RTLKEELFSQINRDRARYGLPPLRWDERAAEVAEEHCREMLKAGYFSHWDLSGRKPYQRYALAGGTEYNAENLGFAFYRPSGPGDHINVRKAAFESYKGMLAERPPEDGHRRTILNPHHTHVGIGIAFSVDRVYISQLFLSRYVKFDPPP 170          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig684.17795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KZD4_9PHAE0.000e+091.01DUF4201 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A660YHN1_9BACT1.240e-1230.50SCP domain-containing protein n=2 Tax=Candidatus L... [more]
A0A7C7L761_9BACT1.080e-1027.86CAP domain-containing protein n=1 Tax=Candidatus L... [more]
A0A660Y496_9BACT2.180e-931.33SCP domain-containing protein (Fragment) n=1 Tax=C... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035940CAP superfamilyGENE3D3.40.33.10coord: 72..241
e-value: 2.1E-12
score: 49.3
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 104..235
IPR014044CAP domainPFAMPF00188CAPcoord: 111..232
e-value: 4.1E-7
score: 30.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig684contigEcto-sp13_S_contig684:489..4835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig684.17795.1mRNA_Ecto-sp13_S_contig684.17795.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig684 489..4835 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig684.17795.1 ID=prot_Ecto-sp13_S_contig684.17795.1|Name=mRNA_Ecto-sp13_S_contig684.17795.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=648bp
MIDADVDDTTPDQTNEEAGDVPSQIAAGETCAGVGEALVGDAQEEGSTIT
RDDLENGDGNGLDVAEDTGGSGLEKGAPEDNAYAPRSEDCVNAADGAGDD
LYRRVRELAVEAINAARDTKQLELLFPDEALAVPAMTHCRTMCEHDFLSH
WDMAGRKPYQRYSDFAYGQHVSEDVFEFRVNEAAEDEIMNRIKECIEGRL
RVDALDQEGGKTNHMLDNKHTHIGIGVHVVDDRLRYAEVYADRYLELLDS
PAELSIADEALGFHISVQMTSSDVGPYACLVFHDPVATPLTVGELQQQFN
GPYSDFTTSQVVSIIWPWQMDVLEDGVFGIPVSVSPIEAGTYYVQILVRE
DPGSIPYDTDPAGGLPLPGESFCGGALVLRAPEEGEAKMGMSDLDGAGGL
LSDNGGGTLEEREARTMASTSALRRDLPPIVRVRVVQDAGGSMQQEASYE
NKVFMPRERAEDMAQLNLAMEFLRLGAWDDFSSREHTSEGTGTIVDPAVA
MKKGQTAGEMKDPNEGGAASEAPVDPDKAATDGHDAPTEALTTPEEATDA
GGIATQEEEMKQRIADSGGGGGDGDANDAQQPLLEGERSESADHKLMNGH
DAEPEVPWVVTDIAIVRFRGGEKVEPPEDFELVPGDLANPPALDGNGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035940CAP_sf
IPR014044CAP_domain