prot_Ecto-sp13_S_contig6838.17793.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6838.17793.1
Unique Nameprot_Ecto-sp13_S_contig6838.17793.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length426
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6838.17793.1 vs. uniprot
Match: D8LGF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF6_ECTSI)

HSP 1 Score: 577 bits (1486), Expect = 3.410e-201
Identity = 335/425 (78.82%), Postives = 345/425 (81.18%), Query Frame = 0 
Query:    1 KVLRGQELASAQSQGIADGLSETSTRIAGLSDSLSQELASAMREIEKQETLLASLLTRQDVAATQASSLSTELNNAKSDLASYMEAIEEDRRATKDQNHDLMETIGFIHDCLDNASSAWARFQAFTYLILAANLCWVLTTAPPLRSARTALFALVAFGLLLEKSLCGGDDRGGSDGLERVDWLVSGLKWASPGTFAAATWAKVFTQEKIRWLTFQAGAVILGHTLTSYYLPSLELGRLASSLLAAWKNSRNGDNSRNDDHRGTSRSRXXXXXXXXXRRTDGPQLLRLLPFGRGSGDHDDGTVARGGHGHSRNHAGESFHHDGNEDDDSTNDNGSVQDDNNDSGRLGAREPVTPGPERAANGSSFGGSRRASGQGSARADGLDGLKRQELQSLAKKTDGVVRANLSTPNIIRGLRELGITGDALDH 425
            +VL+GQELASAQSQGIADGLSETSTR+AGLSDSLSQEL SAMREIEKQETLLASLLTRQDVAATQASSLSTELNNAKSDLASYMEAIEEDRR                                  YLILAANLCWVLTTAPPLRSARTALFALVAFGLLLEKSLCGGDDRGG DGLERVDWLVSGLKWASPGTFAAATWAKVFTQEKIRWLTFQAGAVIL HTLTSYYLPSLELGRLASSLLAAWKNSRNGD SRNDDHR                             GRG GD DDGT AR GH HSR+HAGESF HDGN+DD +TND+GSVQDDN++SGRLGAREPVTPGP RA NGSS GGSRRASGQG+ RADGLDGLKRQELQSLAKKTDGVVRANLST NIIRGLRELGIT DALDH
Sbjct:  211 QVLKGQELASAQSQGIADGLSETSTRLAGLSDSLSQELVSAMREIEKQETLLASLLTRQDVAATQASSLSTELNNAKSDLASYMEAIEEDRR----------------------------------YLILAANLCWVLTTAPPLRSARTALFALVAFGLLLEKSLCGGDDRGGLDGLERVDWLVSGLKWASPGTFAAATWAKVFTQEKIRWLTFQAGAVILSHTLTSYYLPSLELGRLASSLLAAWKNSRNGD-SRNDDHR----------------------------VGRGRGDRDDGTAARSGHDHSRHHAGESFQHDGNQDD-TTNDDGSVQDDNSNSGRLGAREPVTPGPGRAGNGSSNGGSRRASGQGNTRADGLDGLKRQELQSLAKKTDGVVRANLSTLNIIRGLRELGITEDALDH 571
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BLAST of mRNA_Ecto-sp13_S_contig6838.17793.1 vs. uniprot
Match: A0A6H5JDE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE7_9PHAE)

HSP 1 Score: 473 bits (1216), Expect = 3.110e-164
Identity = 260/305 (85.25%), Postives = 269/305 (88.20%), Query Frame = 0 
Query:  127 YLILAANLCWVLTTAPPLRSARTALFALVAFGLLLEKSLCGGDDRGGSDGLERVDWLVSGLKWASPGTFAAATWAKV------FTQEKIRWLTFQAGAVILGHTLTSYYLPSLELGRLASSLLAAWKNSRNGDNSRNDDHRGTSRSRXXXXXXXXXRRTDGPQLLRLLPFGRGSGDHDDGTVARGGHGHSRNHAGESFHHDGNEDDDSTNDNGSVQDDNNDSGRLGAREPVTPGPERAANGSSFGGSRRASGQGSARADGLDGLKRQELQSLAKKTDGVVRANLSTPNIIRGLRELGITGDALDH 425
            YLILAANLCWVLTTAPPLRSARTALFALVAFGLLLEKSLCGGDDRGG DGLERVDWL+SGL+WASPGTFAAATWAKV      FTQEKIRWLTFQAGAVILGH LTSYYLPSLELGRLASSLLAAW  SRNGDNSRNDDHRGTSRSR         RRTDG QLLR L  GRGSGD D+GTVAR GHG SRNHAGESF HDGN+DD S ND+GSVQDD ++SG LGAR+PVTPGP RAANGS  GGSRRASGQG+ARADGLDGLKRQELQSLAKKTDGVVRANLST NIIRGLRELGIT DALDH
Sbjct:    4 YLILAANLCWVLTTAPPLRSARTALFALVAFGLLLEKSLCGGDDRGGLDGLERVDWLLSGLRWASPGTFAAATWAKVANRLKVFTQEKIRWLTFQAGAVILGHALTSYYLPSLELGRLASSLLAAWMKSRNGDNSRNDDHRGTSRSREGHGSATDDRRTDGLQLLRPLTVGRGSGDRDNGTVARTGHGRSRNHAGESFQHDGNQDD-SINDDGSVQDDIDNSGGLGARQPVTPGPGRAANGSGNGGSRRASGQGNARADGLDGLKRQELQSLAKKTDGVVRANLSTLNIIRGLRELGITEDALDH 307
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6838.17793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGF6_ECTSI3.410e-20178.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDE7_9PHAE3.110e-16485.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..104
NoneNo IPR availableCOILSCoilCoilcoord: 31..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6838contigEcto-sp13_S_contig6838:313..3981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6838.17793.1mRNA_Ecto-sp13_S_contig6838.17793.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6838 313..3981 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6838.17793.1 ID=prot_Ecto-sp13_S_contig6838.17793.1|Name=mRNA_Ecto-sp13_S_contig6838.17793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=426bp
KVLRGQELASAQSQGIADGLSETSTRIAGLSDSLSQELASAMREIEKQET
LLASLLTRQDVAATQASSLSTELNNAKSDLASYMEAIEEDRRATKDQNHD
LMETIGFIHDCLDNASSAWARFQAFTYLILAANLCWVLTTAPPLRSARTA
LFALVAFGLLLEKSLCGGDDRGGSDGLERVDWLVSGLKWASPGTFAAATW
AKVFTQEKIRWLTFQAGAVILGHTLTSYYLPSLELGRLASSLLAAWKNSR
NGDNSRNDDHRGTSRSREGHGSANDDRRTDGPQLLRLLPFGRGSGDHDDG
TVARGGHGHSRNHAGESFHHDGNEDDDSTNDNGSVQDDNNDSGRLGAREP
VTPGPERAANGSSFGGSRRASGQGSARADGLDGLKRQELQSLAKKTDGVV
RANLSTPNIIRGLRELGITGDALDH*
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