prot_Ecto-sp13_S_contig6830.17788.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig6830.17788.1
Unique Name	prot_Ecto-sp13_S_contig6830.17788.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	871

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig6830.17788.1 vs. uniprot
Match: A0A6H5JD92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD92_9PHAE)

HSP 1 Score: 970 bits (2507), Expect = 0.000e+0
Identity = 555/699 (79.40%), Postives = 573/699 (81.97%), Query Frame = 0

Query:    1 MMRSVTERAASLAAVLLGLQQAGLAFAVPTCERVASQWAVIFSADCTQWFQQIGSRRGSPPESCIQ---------------QFTSAVLVENFPWNDDVVIADNETPGNDFSLQPEQPVLQFGAGTVIMQTSWDMEDGSLWQPRMSSSAERVYAEVEYIASDNHNYLDFDLSVRYEPEHPPPGSFTRALSEDNDAPDEADVEEILELSATPPPLAQDANGDLSYEPAYVYSYELESYDFSYSFELEDLDSYSYEFIGSMFEEELSPYSQTYSYNFRGGEEVSVPPPSAVQSVTSLDIYVCTDKDNNLAELRFNCDPENDGDAQCFAEAGEPNVRALQIH---------------------------------------------------------------------------GMDMYCDEVCLAGQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILCGAPRAPPPPSPTDGSRGIPIMSGSPTMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSGTHMTPAPSFEDGSMVPLEPSYMAAPTSSAEPTDGLSTASPAAGVPILTAFPTPSPTATDRELPAASMAPTNAAETTAPSITDGSVLPLEPSYTDAXTTTIEPTNSMPSTVETPAPTTTDRELPVASKAPTNAVETTAPSFTDRSTLEPSYTDAPTTSTGPTDGM 609
            M+ S T R A LAAVLLGLQQAGLAFA PTCERVASQWAVIFSA+CTQWFQQIGSRRGSPPESCIQ               QFTSAVLVENFPWNDDVVI DNETPG+DFSLQPEQPVL+FGAG VIMQTSWDMEDGSLWQPRMSSSAERVYAEVEYIASDNH+YLDFDLSVRYEPEHPPPGS  RALSED+ APDEADVEEILELSATPPPLAQDANGDLSYEPAY+YSYELESYDFSY+FELEDLDSYSYEFI SMFEEE+SPYSQTYSYNFRGGEEVSVPPPSAVQSVTSLDIYVCTD+D NLAELRFNCD ENDGDAQCFAEAGEPNVRALQIH                                                                           GMDMYCD+VCL GQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILCGAPRAPP PSPTDGSRGIPIMSGSPTMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      X PSSGTH+TPAPSFEDGSMVPLEPSY+AAPTSSAEPTDGLSTASPAAGVPILTAFPTPSPTATDRELPAAS+APTNAAET +PSITDG+VLPL PSYTDA TTTIEPTNSMP+TVETPAPTTTDRELP ASKAPTN      PSFTD S LEPSYTDAP+TSTG TDGM
Sbjct:    1 MIMSATGRVAFLAAVLLGLQQAGLAFAAPTCERVASQWAVIFSAECTQWFQQIGSRRGSPPESCIQDPTWNHCMSNMRHDKQFTSAVLVENFPWNDDVVIVDNETPGDDFSLQPEQPVLKFGAGIVIMQTSWDMEDGSLWQPRMSSSAERVYAEVEYIASDNHSYLDFDLSVRYEPEHPPPGSLARALSEDDKAPDEADVEEILELSATPPPLAQDANGDLSYEPAYIYSYELESYDFSYNFELEDLDSYSYEFIDSMFEEEISPYSQTYSYNFRGGEEVSVPPPSAVQSVTSLDIYVCTDEDINLAELRFNCDLENDGDAQCFAEAGEPNVRALQIHVRMKKYIEFPRLKFWCDVVLLHLCLIFVISCVFYFLCVGSKCECEERHGTKLSHLDIRYRKSDTVTLAVTRQAQQGMDMYCDKVCLPGQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILCGAPRAPPAPSPTDGSRGIPIMSGSPTMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTMSPTXSPSSGTHLTPAPSFEDGSMVPLEPSYVAAPTSSAEPTDGLSTASPAAGVPILTAFPTPSPTATDRELPAASLAPTNAAETISPSITDGTVLPLGPSYTDAPTTTIEPTNSMPNTVETPAPTTTDRELPAASKAPTNXXXXXXPSFTDGSMLEPSYTDAPSTSTGTTDGM 699

[Close]

BLAST of mRNA_Ecto-sp13_S_contig6830.17788.1 vs. uniprot
Match: D8LC09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC09_ECTSI)

HSP 1 Score: 811 bits (2095), Expect = 6.750e-285
Identity = 447/478 (93.51%), Postives = 454/478 (94.98%), Query Frame = 0

Query:    1 MMRSVTERAASLAAVLLGLQQAGLAFAVPTCERVASQWAVIFSADCTQWFQQIGSRRGSPPESCIQQFTSAVLVENFPWNDDVVIADNETPGNDFSLQPEQPVLQFGAGTVIMQTSWDMEDGSLWQPRMSSSAERVYAEVEYIASDNHNYLDFDLSVRYEPEHPPPGSFTRALSEDNDAPDEADVEEILELSATPPPLAQDANGDLSYEPAYVYSYELESYDFSYSFELEDLDSYSYEFIGSMFEEELSPYSQTYSYNFRGGEEVSVPPPSAVQSVTSLDIYVCTDKDNNLAELRFNCDPENDGDAQCFAEAGEPNVRALQIHGMDMYCDEVCLAGQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILCGAPRAPPPPSPTDGSRGIPIMSGSPTMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSGTHMTPAPSFEDGSMVPLEPSYMAAPTSSAEPTD 478
            MM S T RAASLAAVLLGLQQAGLAFA PTCERVA QWAVIFSA+CTQWFQQIGSRRGSPPESCIQQFTSAVLVENFPWNDDVVI DNETPG+DFSLQPEQPVL+FGAG VIMQTSWDMEDGSLWQPRMSSSAER+YAEVEYIASDNH+YLDFDLSVRYEPEHPPPG   RALSEDNDAPD ADVEEILELSATPPPLAQDA GDLSYEPAYVYSYELESYDFS   ELEDLDSYSYEFI SMFEEE SPYSQTYSYNFRG EEVSVPPPSAVQSVTSLDIYVCTD+DNNLAELRFNCDPENDGDAQCFAEAGEPNVRAL IHGMDMYCD+VCLAGQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILCGAPR PPPPSPTDGSRGIPIMSGSPTMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX  S THMTPAPSFEDGSMVPLEPSYMAAPTSSAEPTD
Sbjct:    1 MMISATGRAASLAAVLLGLQQAGLAFAAPTCERVAGQWAVIFSAECTQWFQQIGSRRGSPPESCIQQFTSAVLVENFPWNDDVVIVDNETPGDDFSLQPEQPVLKFGAGIVIMQTSWDMEDGSLWQPRMSSSAERIYAEVEYIASDNHSYLDFDLSVRYEPEHPPPGRLMRALSEDNDAPDAADVEEILELSATPPPLAQDATGDLSYEPAYVYSYELESYDFSXXXELEDLDSYSYEFIDSMFEEESSPYSQTYSYNFRGEEEVSVPPPSAVQSVTSLDIYVCTDEDNNLAELRFNCDPENDGDAQCFAEAGEPNVRALHIHGMDMYCDKVCLAGQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILCGAPRVPPPPSPTDGSRGIPIMSGSPTMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMXXXXXXXSSTHMTPAPSFEDGSMVPLEPSYMAAPTSSAEPTD 478

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig6830.17788.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig6830.17788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JD92_9PHAE	0.000e+0	79.40	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LC09_ECTSI	6.750e-285	93.51	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..871
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..27 score: 0.713

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig6830	contig	Ecto-sp13_S_contig6830:314..6049 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig6830.17788.1	mRNA_Ecto-sp13_S_contig6830.17788.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig6830 314..6049 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig6830.17788.1 ID=prot_Ecto-sp13_S_contig6830.17788.1|Name=mRNA_Ecto-sp13_S_contig6830.17788.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=871bp
MMRSVTERAASLAAVLLGLQQAGLAFAVPTCERVASQWAVIFSADCTQWF
QQIGSRRGSPPESCIQQFTSAVLVENFPWNDDVVIADNETPGNDFSLQPE
QPVLQFGAGTVIMQTSWDMEDGSLWQPRMSSSAERVYAEVEYIASDNHNY
LDFDLSVRYEPEHPPPGSFTRALSEDNDAPDEADVEEILELSATPPPLAQ
DANGDLSYEPAYVYSYELESYDFSYSFELEDLDSYSYEFIGSMFEEELSP
YSQTYSYNFRGGEEVSVPPPSAVQSVTSLDIYVCTDKDNNLAELRFNCDP
ENDGDAQCFAEAGEPNVRALQIHGMDMYCDEVCLAGQEGGLWCDIFGLDG
CRMCTDDCTSICDGEASCSSCILCGAPRAPPPPSPTDGSRGIPIMSGSPT
MAPSAVDGSRGVETMSPTSSTTSSSSSGSRGIETTMSPTSSPSSGTHMTP
APSFEDGSMVPLEPSYMAAPTSSAEPTDGLSTASPAAGVPILTAFPTPSP
TATDRELPAASMAPTNAAETTAPSITDGSVLPLEPSYTDAPTTTIEPTNS
MPSTVETPAPTTTDRELPVASKAPTNAVETTAPSFTDRSTLEPSYTDAPT
TSTGPTDGMPTATETASPTTTDRELPAASMAPTSEPTWAPTDGMSTTSET
ASPTTSDRERPSPSTAPTSVVDSISAPTDAMPTTSETASPTTTDREIDSP
SMAPTSVVDPTLAPTDGMPTTVETASPTTTDREIDSPSTAPTSVVDSTSA
PTDGMPTTVETASPTTTDREIDSPSMAPTSMVDSTWAPTDAMPTASETAS
PTTTDREIDSPSMAPTSMVDSTSAPTGAMPTTPETASPTTSDRELPAASM
APTSVVDSTSAPTDGMPTTVE