prot_Ecto-sp13_S_contig6827.17778.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6827.17778.1
Unique Nameprot_Ecto-sp13_S_contig6827.17778.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6827.17778.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 5.000e-54
Identity = 93/105 (88.57%), Postives = 99/105 (94.29%), Query Frame = 0 
Query:    1 HGRSPALCALGRQGTPRASLEKSIDVLLAGAPPSDSTTLVNNNADAAQGHLPIPAASPALSRRLGLMFQAPDGGGGKGGRGNSPLCWVLHAARGGIEAFNLAYEG 105
            HGRSPALCALGR+G PRASLEKSIDVLLAGAPPS ST LVNN ADAA+G+LP+PAASPALS RL LMFQAP+GGGGKGGRGNSPLCWVLHAARGGIEAFNLAY+G
Sbjct:  426 HGRSPALCALGRKGNPRASLEKSIDVLLAGAPPSGSTALVNNGADAAEGNLPVPAASPALSHRLRLMFQAPEGGGGKGGRGNSPLCWVLHAARGGIEAFNLAYDG 530
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BLAST of mRNA_Ecto-sp13_S_contig6827.17778.1 vs. uniprot
Match: A0A6H5K219_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K219_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 4.350e-50
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 0 
Query:    1 HGRSPALCALGRQGTPRASLEKSIDVLLAGAPPSDSTTLVNNNADAAQGHLPIPAASPALSRRLGLMFQAPDGGGGKGGRGNSPLCWVLHAARGGIE 97
            HGRSPALCALGR+GTPRASLEKSI VLLAGAPPS STTLVNN+ADAA+GHLPIPAAS AL RRL L+FQAP+GGGGKGGRGNSPLCWVLHAARGGIE
Sbjct:  430 HGRSPALCALGRKGTPRASLEKSIRVLLAGAPPSGSTTLVNNDADAAEGHLPIPAASTALCRRLRLIFQAPEGGGGKGGRGNSPLCWVLHAARGGIE 526
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6827.17778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMR2_ECTSI5.000e-5488.57Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K219_9PHAE4.350e-5089.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6827contigEcto-sp13_S_contig6827:6719..7942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6827.17778.1mRNA_Ecto-sp13_S_contig6827.17778.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6827 6719..7942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6827.17778.1 ID=prot_Ecto-sp13_S_contig6827.17778.1|Name=mRNA_Ecto-sp13_S_contig6827.17778.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
HGRSPALCALGRQGTPRASLEKSIDVLLAGAPPSDSTTLVNNNADAAQGH
LPIPAASPALSRRLGLMFQAPDGGGGKGGRGNSPLCWVLHAARGGIEAFN
LAYEG
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