mRNA_Ecto-sp13_S_contig6824.17776.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6824.17776.1
Unique NamemRNA_Ecto-sp13_S_contig6824.17776.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6824.17776.1 vs. uniprot
Match: A0A6H5JP79_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP79_9PHAE)

HSP 1 Score: 782 bits (2019), Expect = 5.340e-281
Identity = 399/417 (95.68%), Postives = 407/417 (97.60%), Query Frame = 1
Query:    1 MSTQEDTETVFTTDAIAFEVALLVAFTAGLVWYYAAKDVPFLVSVCVFTSWLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGSVSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNATQVDTDKHDSLFELETLERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARATDEAFHLETDDGSFQTTRFRGKNGSKRWDDGRTPEDALKDLGVSRLTPRDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTPGETVCHYLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEVRG-------PFGVLV 1230
            MSTQEDTETVFTTDAIAFEVALLVAFTAGLVWYYAAKDVPFLVSVCVFTSWLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFV+YLVVSGQTSAGSVSGF+MALANTYGLLFIILLLGQGLIQVPRQLWETSFN+TELQRLYFNATQVDTDKHDSLFELETLERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARATDEAFHLETDDGSFQTTRFRGKNGSKRWDDGRTPEDALKDLGVSRL+PRDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTP E+VCH+LRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEV         PFG+L+
Sbjct:    1 MSTQEDTETVFTTDAIAFEVALLVAFTAGLVWYYAAKDVPFLVSVCVFTSWLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVVYLVVSGQTSAGSVSGFLMALANTYGLLFIILLLGQGLIQVPRQLWETSFNETELQRLYFNATQVDTDKHDSLFELETLERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARATDEAFHLETDDGSFQTTRFRGKNGSKRWDDGRTPEDALKDLGVSRLSPRDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTPEESVCHFLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEVMAASRWNLSPFGILL 417          
BLAST of mRNA_Ecto-sp13_S_contig6824.17776.1 vs. uniprot
Match: A0A835ZCR5_9STRA (LMBR1-like membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR5_9STRA)

HSP 1 Score: 235 bits (600), Expect = 2.880e-68
Identity = 144/370 (38.92%), Postives = 212/370 (57.30%), Query Frame = 1
Query:  148 SWLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGSVSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNATQVDTDKHDSLFELETLERNLDSMERAMDIKKHWCI-KDRAHMKNMLSSARATDEAFHLETDDGSFQTTRFRGKNGSKRWDDGRTPEDALKDLGVSRLTP-RDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTPGETVCHYLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEVR-------GPFGVLV 1230
            +W +G  GTLLLPADI    ++G  S W+   WY VYW+TF+LAW+++PI+  AW AGELTW +RI+ A+R N+  Y+AMAV  +  V YL+V G  +  ++SGF+MA  NTYGL+ I+LL+G GL++VPRQLW TSF + +LQ LYF ATQ+DT  +D++++LE  E+  + ++RA        + +++A M   + + +AT + F L    G+ +T R    N      D   P    K     +LTP  +   LHS LR  Q  VVA R +W  L+ +   L  IV+ ++P   +V     G        T ++    RA W WR +L   V +  A+LC  LS +++WSEV         PFG ++
Sbjct:   12 AWYMGLSGTLLLPADIADAQVHGDSSAWLGYAWYTVYWSTFVLAWLVMPIMNAAWAAGELTWRKRIKAAIRANVLTYIAMAVGGIAAVGYLLVRGIATKDTLSGFLMAWGNTYGLMLIVLLMGHGLVEVPRQLWITSFPERQLQLLYFRATQIDTSLYDAIYDLEDAEKEFEKIQRAHRSGGGDAMTREQAKMSLYIEAIQATRDKFDLSAA-GNGRTARPAANN-----IDSPLPAKKAKK---KQLTPVGELVSLHSRLRNGQEKVVAGRQRWEDLMNQVALLELIVSKQLPRPQSVTAGR-GSNPLKRFATFVQLKSARALWFWRLHLEHRVLRLTAVLCFVLSAMVIWSEVALAAPVDLSPFGKII 371          
BLAST of mRNA_Ecto-sp13_S_contig6824.17776.1 vs. uniprot
Match: W7TPT9_9STRA (LMBR1-like membrane protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPT9_9STRA)

HSP 1 Score: 170 bits (431), Expect = 2.400e-43
Identity = 132/410 (32.20%), Postives = 199/410 (48.54%), Query Frame = 1
Query:   37 TDAIAFEVALLVAF-TAGLVWYYAAKDVPFLVSVCVFTSWLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGSVSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNATQVDTDKHDSLFELETLERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARATDEAFHLETDDGS--FQTTR--FRGKNGSKRWDDGRTPEDALKDLGVSRLTP---------------RDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTPGETVCHYLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEV 1206
            TD     +A+L+A  T  L+ YY + DV   V+V ++ SWLLGF G  LLP D+    +      W+ +VW  +YW+TF+L W++LPI++    +G  T  +RI  A+R  ++      V LV F IYLV    T AG+  G +MAL NTYGLLF+++LLG GL++VPR+LW++SF D EL+RLYF ++ VD+D HD++  L  +E  + ++                  +  L  +    E   LE D      Q TR  FR +           PED    + + R TP                  A LH+ L+ AQ+ V   + +  A++ + + +  +    +P+   V +   GE  C  L       G    W W   L     + LA+L   L+   LWS+V
Sbjct:   63 TDPEPAVLAILLALATFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDLGDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLVAQRYTLAGA-EGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSAL------------------REQLRQSPPAGEELALELDACMKILQDTRASFRHR-----------PEDMTLGMLLPR-TPFGVNSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEAVCQGALPYPSDV-KAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQV 440          
BLAST of mRNA_Ecto-sp13_S_contig6824.17776.1 vs. uniprot
Match: A0A7S2SKG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKG6_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.710e-42
Identity = 89/201 (44.28%), Postives = 121/201 (60.20%), Query Frame = 1
Query:   49 AFEVALLVAFTAGLVWYYAAKDV-PFLVSVCVFTSWLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGSVSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNATQVDTDKHDSLFELETL 648
            A E+ LL A T  L+W+Y A ++ P  ++  V  SW LGF+GT LLP DI     +G   L  T  W  VYW+TF LAW++LP++Y+AW AGE TW  R   A+R N+K  +A  VL  +FV+YLV +G  +   +  F M   NTYGLL ++ LLG GL++VPR LW  S     L+RL F A   DTD +D   ++E +
Sbjct:   37 AVELVLLCAATCFLLWWYTALELTPMWIASIVGFSWYLGFVGTFLLPLDITNASFHGLSRLLSTS-WSVVYWSTFCLAWLVLPVVYEAWYAGEPTWRGRFLAALRANLKYCIASTVLGFIFVLYLVATGNVTLEGIPSFFMLFGNTYGLLIVVALLGNGLVEVPRALWRQSTPSDRLERLLFCAAVCDTDVYDCKCDVEDI 236          
BLAST of mRNA_Ecto-sp13_S_contig6824.17776.1 vs. uniprot
Match: A0A7S2WQ09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQ09_9STRA)

HSP 1 Score: 160 bits (406), Expect = 5.940e-40
Identity = 89/201 (44.28%), Postives = 121/201 (60.20%), Query Frame = 1
Query:   49 AFEVALLVAFTAGLVWYYAAKDV-PFLVSVCVFTSWLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGSVSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNATQVDTDKHDSLFELETL 648
            A E+ LL A T  L+W+Y A ++ P  ++  V  SW LGF+GT LLP DI     +G   L  T  W  VYW+TF LAW++LP++Y+AW AGE TW  R   A+R N+K  +A  VL  +FV+YLV +G  +   +  F M   NTYGLL ++ LLG GL++VPR LW  S     L+RL F A   DTD +D   ++E +
Sbjct:   37 AVELVLLCAATCFLLWWYTALELTPMWIASIVGFSWYLGFVGTFLLPLDITNASFHGLSRLLSTS-WSVVYWSTFCLAWLVLPVVYEAWYAGEPTWRGRFLAALRANLKYCIASTVLGFIFVLYLVATGNVTLEGIPSFFMLFGNTYGLLIVVALLGNGLVEVPRALWRQSTPSDRLERLLFCAAVCDTDVYDCKCDVEDI 236          
BLAST of mRNA_Ecto-sp13_S_contig6824.17776.1 vs. uniprot
Match: A0A7S1CL91_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CL91_9STRA)

HSP 1 Score: 154 bits (389), Expect = 3.640e-38
Identity = 112/388 (28.87%), Postives = 181/388 (46.65%), Query Frame = 1
Query:   55 EVALLVAFTAGLVWYYAAKDVPFLVSVCVFTSWLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGSVSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNATQVDTDKHDSLFELETLERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARATDEAFHLETDDGSFQTTRFRGKNGSKRWDDGRTPED---ALKDLGVSRLTP--RDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTPGETVCHYLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSE 1203
            E+ +L+ FT  L+ +Y  K V +   V +  SW LGF+GTLLLP D+  +   G   + M  +W  VYWTTF+LAWV+LP+L + + +GEL W +R++ ++R NIK YL   +L+V+ ++++ +S   S   V GF++  ANT+G++  + +LG GL++VPR  W  S     ++ L F+A  +D+D       L T + ++D +           I D   ++  L       +          F  +  RG            PED      D+ +   T   ++ A LH  L A +  +   + +W  LL+       I NN  P                    V+  T  R  W W      +  K ++  CA LSG+++W E
Sbjct:   11 ELVMLLVFTLLLLRHYTHKSVRWGYWVFIAASWYLGFVGTLLLPMDVGQSQTEGRQPV-MMALWAFVYWTTFVLAWVVLPVLQEFYGSGELGWQKRLKYSLRSNIKFYLVSLILIVILIVWMAISQSWSFAHVGGFLIMCANTWGIILTVFMLGYGLVEVPRMFWAWSDPAEYIRVLQFSAPHLDSD-------LFTAKCDIDDI-----------IADTRRLREKLPHTGPLRD----------FIESIHRG-----------LPEDPGSGTGDVTIDAETAGEKELAALHRRLIAGRARLKRCQFRWDLLLRRVSEAEMIANNSSP--------------------VVHTTRERLHWWWNLKASRVAYKVISAACAFLSGIVVWCE 338          
BLAST of mRNA_Ecto-sp13_S_contig6824.17776.1 vs. uniprot
Match: A0A485KX71_9STRA (Aste57867_13070 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KX71_9STRA)

HSP 1 Score: 145 bits (367), Expect = 5.730e-35
Identity = 84/211 (39.81%), Postives = 126/211 (59.72%), Query Frame = 1
Query:   46 IAFEVALLVAFTAGLVWYYAAKDVPFLVSVCVFTSWLLGFIGTLLLPADIVLTLLNGS---HSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGSVSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNATQVDTDKHDSLFELETLERNLDSM 669
            +  E+ LL+AFTAGL+ +Y    V FLV   VF SW  GF+G +LLP DI  T L+G    HS  +   W  VYW TF L+WVILP+L +   +G  +  +++R ++R  ++ Y  +  +  V ++YLVV    +   + G  M LANTYGLL+II LLG G + VPR++W  +    +L+  YF A Q+  D+ +S+F  E + R++ +M
Sbjct:    7 LVLELLLLLAFTAGLLHHYKDAQVGFLVYGFVFVSWYAGFLGLVLLPLDISTTALHGEAVVHSSLLVG-WKLVYWLTFFLSWVILPVLIEYCQSGAFSPEQKLRTSIRYLLRHYALLLTIGAVLLVYLVVVDHFTVSGLVGLAMTLANTYGLLWIIALLGHGFVSVPRKVWAFASPTAQLRETYFRAIQIHDDRVESMFIYEDVVRDVQAM 216          
BLAST of mRNA_Ecto-sp13_S_contig6824.17776.1 vs. uniprot
Match: A0A196SP52_BLAHN (LMBR1 domain containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SP52_BLAHN)

HSP 1 Score: 140 bits (354), Expect = 3.980e-33
Identity = 75/208 (36.06%), Postives = 126/208 (60.58%), Query Frame = 1
Query:   58 VALLVAFTAGLVWYYAAKDVPFLVSVCVFTSWLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGSVSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNATQVDTDKHDSLFELETLERNLDSMERAM 681
            V LL   T GL+ YY  K V F  S+ ++ +W LGFIG +L P DI  ++ + + +  +  +W  VYW TF LAWV +PI+ + W +GE   + R + ++ +N K Y+ +  L+VV VI+ +++ +     V G ++AL+NTYGLLF+I LLG GL+++P  LW        L+ LY  A ++D  K++  +++ +L+ NL  +++ +
Sbjct:   15 VVLLALCTYGLLRYYREKSVSFGYSLTIYITWFLGFIGMILYPVDIGYSIADKAANPKIKLIWVGVYWFTFFLAWVYIPIMMEYWASGEFKPSSRFKESLWVNAKFYVNLVPLIVVIVIWYLIAKKGDTSGVQGLIIALSNTYGLLFVIFLLGPGLVELPINLWRRRDQHRALEALYQKAYKLDAAKYEYEYKVVSLKMNLQDLQKTI 222          
BLAST of mRNA_Ecto-sp13_S_contig6824.17776.1 vs. uniprot
Match: A0A835Z6T2_9STRA (LMBR1-like membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T2_9STRA)

HSP 1 Score: 140 bits (354), Expect = 4.200e-33
Identity = 113/369 (30.62%), Postives = 171/369 (46.34%), Query Frame = 1
Query:  148 SWLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGSVSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNAT-QVDTDKHDSLFELETLERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARATDEAFHLETDDGSFQTTRFRGKNGSKRWDDGRTPEDALKDLGVSRLTPRDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTPGETVCHYLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEVR-------GPFGVLV 1230
            +W +G  GTLLLPADI    ++ + S W++  W  VYW+TF+LAWV++PIL  AW+AGELTW  RIR A+++N+  Y AMA   +V   YL+  G  +  +   F MA  NTYGL+ I+LL+G G  +  R    T+    E       A+  V+  ++     LE ++  +DS + A                 M    R +  +   ++  G  +  + RGK                    VS L      +LHS LR  Q  V+A+  +W  L+ +   +  I++  +P      E  P     +YLR      G+R   VW  Y      + LA++C  LS +++WSE          PFG L+
Sbjct:  118 AWYMGLSGTLLLPADIADIKVHRTGSAWVSHAWSTVYWSTFVLAWVVMPILNSAWHAGELTWRARIRAAIKINMLTYAAMAAAGLVATGYLLYKGVATRDTAQAFFMAWGNTYGLMLIVLLMGHGDFERVRGGLVTTPVSPEADEAPAKASINVEVGRY-----LEAIQETIDSFKLAA----------------MGGDRRRSASSCSPDSSKGP-KKEKDRGKRNH-----------------VSELI-----KLHSRLREGQERVMAAWQRWQDLVDKVTCVEQIISRTLP------EPQPLPGASNYLRA----QGSRVARVWLLYAHHHFLRLLAVICLALSVMVVWSECTLAVPYDLSPFGWLI 432          
BLAST of mRNA_Ecto-sp13_S_contig6824.17776.1 vs. uniprot
Match: A0A7S3HAN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAN0_9STRA)

HSP 1 Score: 139 bits (351), Expect = 8.600e-33
Identity = 115/425 (27.06%), Postives = 198/425 (46.59%), Query Frame = 1
Query:   40 DAIAFEVALLVAFTAGLVWYYAAKDVPFLVSVCVFTSWLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGSVSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNATQVDTDKHDSLFELETLERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARATDEAFHLETDDGSFQTTRFRGKNGSKRWDDGRTPEDALKDLGVSRLTPRDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTPGE--------------TVCH--------YLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEV------RGPFGVLV 1230
            + +A E  LL      L+ YYAA  V   V V V+ SW+LGF   L LP D+ +TL+   HS+ + RVW  VYW+TF+LAW +LPI  +   +G  ++ E++  ++   +   +   +  V+++IY+V +   +   V GF+MA+ NTYG+L I LL+G GL+ +P  LW     +  L+ LY +A   +    D+ +ELE  E  ++++   ++             K+  ++ R     F ++         +F  ++ S+ +  G    D + D  ++  T +   +LH+ L  AQ+   AS  +W  L+ E++    I       G +    T                 T+C+        +LR      G    W  R Y+ +  C+  A++C   S +ILWSE+        P G+++
Sbjct:    6 ELVATEFVLLAIGCFFLLRYYAASMVSMDVFVAVYFSWVLGFASVLFLPYDLSVTLVESEHSVLLERVWKFVYWSTFILAWAVLPIQMEYHGSGHFSFKEKMWDSLYNLVFSGILALLAGVIYIIYMVSTSGGTFSQVIGFVMAMGNTYGVLLITLLMGNGLVALPMHLWRLGDIERGLRELYLSAAYAEESFQDARYELEDCEAEIETIVGLLE-------------KSGSATLRNEVGPF-VDILTNKVSNFQFAKRSKSRAYVRG-FQFDKVDDAVLT--TKKHLVKLHARLMTAQLKARASERRWNVLIAESERQEEIAVMRAGSGPSAGSATDSXXXXXXXXXNPSFLFTLCNPWTWRTPEFLRPYCE--GLYVLWAQRLYVHS--CRGAAIVCGAFSVLILWSEMLMSSQLHSPIGLMM 409          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6824.17776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JP79_9PHAE5.340e-28195.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCR5_9STRA2.880e-6838.92LMBR1-like membrane protein n=1 Tax=Tribonema minu... [more]
W7TPT9_9STRA2.400e-4332.20LMBR1-like membrane protein n=3 Tax=Monodopsidacea... [more]
A0A7S2SKG6_9STRA3.710e-4244.28Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2WQ09_9STRA5.940e-4044.28Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1CL91_9STRA3.640e-3828.87Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A485KX71_9STRA5.730e-3539.81Aste57867_13070 protein n=1 Tax=Aphanomyces stella... [more]
A0A196SP52_BLAHN3.980e-3336.06LMBR1 domain containing protein n=1 Tax=Blastocyst... [more]
A0A835Z6T2_9STRA4.200e-3330.62LMBR1-like membrane protein-domain-containing prot... [more]
A0A7S3HAN0_9STRA8.600e-3327.06Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6824contigEcto-sp13_S_contig6824:544..4794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score778.1
Seed ortholog evalue2e-222
Seed eggNOG ortholog2880.D7FY43
Preferred nameLMBRD2
Model size1230
KEGG koko:K10393,ko:K16831
Hectar predicted targeting categoryother localisation
GOsGO:0001726,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005884,GO:0005886,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0008150,GO:0009605,GO:0009987,GO:0015629,GO:0016020,GO:0016043,GO:0016192,GO:0016477,GO:0030030,GO:0031252,GO:0031268,GO:0031941,GO:0032991,GO:0040011,GO:0042221,GO:0042330,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051234,GO:0051674,GO:0071840,GO:0071944,GO:0098657,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120036
Exons7
EggNOG free text desc.LMBR1-like membrane protein
EggNOG OGsKOG2296@1,KOG2296@2759
Cds size1230
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6824.17776.1prot_Ecto-sp13_S_contig6824.17776.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6824 544..4794 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463937.9168525-CDS-Ecto-sp13_S_contig6824:543..7801681463937.9168525-CDS-Ecto-sp13_S_contig6824:543..780Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6824 544..780 -
1681463937.9300385-CDS-Ecto-sp13_S_contig6824:1165..13421681463937.9300385-CDS-Ecto-sp13_S_contig6824:1165..1342Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6824 1166..1342 -
1681463937.940965-CDS-Ecto-sp13_S_contig6824:1540..17531681463937.940965-CDS-Ecto-sp13_S_contig6824:1540..1753Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6824 1541..1753 -
1681463937.9516978-CDS-Ecto-sp13_S_contig6824:2715..28901681463937.9516978-CDS-Ecto-sp13_S_contig6824:2715..2890Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6824 2716..2890 -
1681463937.9620411-CDS-Ecto-sp13_S_contig6824:3218..34221681463937.9620411-CDS-Ecto-sp13_S_contig6824:3218..3422Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6824 3219..3422 -
1681463937.9725096-CDS-Ecto-sp13_S_contig6824:4106..42491681463937.9725096-CDS-Ecto-sp13_S_contig6824:4106..4249Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6824 4107..4249 -
1681463937.9881976-CDS-Ecto-sp13_S_contig6824:4713..47941681463937.9881976-CDS-Ecto-sp13_S_contig6824:4713..4794Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6824 4714..4794 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6824.17776.1

>prot_Ecto-sp13_S_contig6824.17776.1 ID=prot_Ecto-sp13_S_contig6824.17776.1|Name=mRNA_Ecto-sp13_S_contig6824.17776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=410bp
MSTQEDTETVFTTDAIAFEVALLVAFTAGLVWYYAAKDVPFLVSVCVFTS
WLLGFIGTLLLPADIVLTLLNGSHSLWMTRVWYAVYWTTFLLAWVILPIL
YQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGS
VSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNAT
QVDTDKHDSLFELETLERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARA
TDEAFHLETDDGSFQTTRFRGKNGSKRWDDGRTPEDALKDLGVSRLTPRD
AARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETT
PGETVCHYLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWS
EVRGPFGVLV
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mRNA from alignment at Ecto-sp13_S_contig6824:544..4794-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6824.17776.1 ID=mRNA_Ecto-sp13_S_contig6824.17776.1|Name=mRNA_Ecto-sp13_S_contig6824.17776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4251bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6824:544..4794- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTACGCAAGAGGATACAGAGACGGTTTTCACGACCGACGCCATCGC GTTCGAGGTGGCCTTGCTCGTCGCCTTTACGGTGCGCACGGACAGCGGTA CCCTGACGATAACGACACGGCACAAGACCTAGCAGCAGCACATGAGTTGA CTCTGGCTTCTCGGTTGTCATAGTTCCCCTCTGGGCGTATGTATTTCTTG GACAGGGCGAACGCTCGAAGCGAAGCCACCCGATGACGGCGACGGCCGTT TCATGCTTCATGCTTCATGCTTCATGCTTCCTACCGTAGTTTCGGTGGGG GTTTCTCTACCCTGCGTGGCCTTGTTTCCTGGACTCGGCAGACGTTGGTA GTAGTGATGCGCCAGAGGGTGGTAGATTTGGGTTGTGATCACAACCAGGA TAGGCTTCCCTTTTCCTTCAACAGAACAGGCACTTCTATATACATGTAGT ACTCAAGTTGTTGGGCTTGTTGTGGCTCTTGTTGTTGGTGATGGCGCCTC TCACGAACGGTAACATTAGCAACCGCCCCGCCCTTTCTTTTGCAGGCCGG GTTGGTATGGTACTATGCAGCGAAGGATGTGCCATTCTTGGTGAGCGTGT GCGTCTTCACCTCTTGGCTGCTGGGGTTTATTGGAACGCTGTTGCTGCCT GCGGACATCGTCCTAACGCTACTCAACGGCTCTCATAGGTGGGTGTGCCT GGGTCTGGGAGTAGATTTTTTTGGTTCTGGTGACGCACTGCGGCTCATGC GTGGCCGGCCACATTTCTAGCCTGNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTA GATGTTGGAATCTTCACCGGAAACCCTGTCTCCCCTCTCGATCCGGTACC TTCGCACTTCAACCTTGGTATTTGGGTGGTTTGCATGTAGATCGTTGAAC ATTTGCCAAAAACCGACGCACTCCGTTCGACGGCATAAGTGGCAATGCAC GAGGGTTACCGTACATGAAAATTGTGGAAACCCCCCTCCGCACCCTGATG ATTTACGATGCCCTCCTGGTGTAAAGGGAAGGTACAGGGAATGATTGAGG CATGGAATTGCCAGGACAAGACGGTCGCTGTGCTCGGGTATAGGAAGTGG GTTGAAAGGGCGGGAAGTGACAACGATAGGATAGATAGACTAGGCAAGAC ATTTGTCATCCGCCTTTCGCAAAGTAGGAAGGAACGATTGGCCATCGGAT ATTGGTCCAGTGTGAACAAGTCTCCGGCCTCTAGAAGACTCATGATCAAT GGTCTAACCGCTAAGGCATGCAAAACATGTGAGTACGCCCCTCCCCCCCC CCCTGATGTCTTGGTCCCACAGTCTTTGGATGACGAGGGTGTGGTACGCG GTGTACTGGACGACTTTCCTGCTTGCCTGGGTCATCCTGCCCATCCTCTA CCAGGCGTGGAACGCGGGGGAGCTGACATGGGCGGAGCGGATCCGGCGCG CCGTGCGGCTCAACATCAAGCAGTACCTTGCCATGGCGGTGCTTCTTGTG GTGTTTGTCATCTACCTGGTTGTCAGGTGATTTTTTGTTAGTTTTTTCTG TTTCTGTTCTTTCGTGTGAGGTTAGTTTTGCGCGGGTTGTTGGTGCTGTT TCTCTGGACTATGTGCATCCAACGCCGCCAACGTCCGTCGAAACTGCTTT GTCAGCATGCCTGCCGCGTTTTGCCTTCCTTCCCCGTCTGCATGCTAAAT ATGTGTGCTCGCCCCCCCCCCCTCCCCCGCCTCCCTGCTGTGGGGTGATG CTACCGTGCTCTTCTTTGGCTGCTGTGGATAAATCGAATCGACCACGCGG CTGCTGCCTCGGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGTTGTGTTC GCAGTGGGCAGACCAGCGCGGGGAGCGTGAGCGGGTTTATGATGGCCCTG GCAAACACGTACGGTCTTCTATTTATCATCCTGCTGTTGGGGCAGGGGCT GATTCAGGTGCCTAGGCAGCTGTGGGAGACCAGCTTCAACGACACAGAGC TACAAAGGCTCTACTTCAACGCTACACAGGTATGTGAATTCCGCGCAAAA CACATCGCGTCCTACCATCTGTTTTTGTGGGGTCCTCCGGGTGGACAACC GTAGCATCCGAAGAGTTTTCTCCCACCACCCTCCTTCACCCGATGATACA GCGGTCTTGACTAGATTGTGGGCGAGTAGCCCGCCTCACGCCTTGCTCGT TCTCGCAAAGAACGCAGCATGTTGTGCCCGGTGGCATGCAGCGGCGACCG GCGTGTCTAGTGAAATCGTTTTTGGCCCCCCCGTTGGGGGTAAGCGCTGC TGTTGCCGGAATTTGCCGCCAGGCATAAGGGCGGCATTAGAAGCGGACCC ATGACTCCTCGTGCCTGTGTTGGCACGGTCCGTGCGCTGACCTCTCGTAC CCTGTTGAGACGCTCCGCAGCATGATCTCATCGCCAACGTACAATGGCAG TAGCATCCATGCGCAGTTTGTTCAGACGTTGGAACACGACCGCACCCTCT GTGGGGTTGAGATTCGGCGGCACACGTCGAAGAGCGAAACCACACCTTCG AAGGGGTGCAGCGTTGTCCATTCCCACTCTCCGCTTGGCTTCTCGCTTGC AACCGATCACTATCGTTTGTATCGTCCCCTCCGATAGATAGCATGAGTGG GGTACCCGATTCCCGGTGCTGTTTCCCCTCCACCTCAACCTACTACTGTC CTGTTGCGATATATTGTTTTTCATAGGATGTACAGGCAATTAGCAAGTAC CCCCGTGTGGCTCAAGCACAAAAAGACGCCTTGCCGCATATCCTACGGGA GCCGTATCCCTTGGTAGAACATGTATGCATACGTACCTCGCTGCTTTAGG TTACGCTTGGAAATGGAACGCAGCTTCATTGCCCGGCTTGGCAAGCGGCA AGATGACGGGAGGGTAATTTTAGAAGCGCTTTTGGGCTGACTAAGCACGG TTATAGCCACCCCCGCCCCTGCCCCCCCTCGTATACCGAAGGTGGACACA GACAAGCACGACTCGTTGTTTGAGCTGGAAACGTTGGAGCGAAACCTAGA CTCGATGGAGCGTGCCATGGACATCAAGAAGCACTGGTGTATCAAGGACC GAGCGCACATGAAGAACATGCTAAGCTCGGCTAGAGCTACGGATGAGGCA TTTCACTTGGAGACCGACGACGGTTCCTTCCAGACTACGAGGTTCAGGGG CAAGGTGGGGCTAAAGTAGAGGGATGAGGGATGAGGCAGGCGGCGCGATA GACGATCTTTGTTGTGTTGACGTCGCTGCTGTCGTTGTGTTTCAGCAACA CTCAAGACGTAACTACGAAAACTTCGTGATGCATAGCTCCGGCCGCTAAA TCCCGCTGAACGTTGAGAACCTTCCCCTTGCCCCGGATGTCTGCGCTTGC AGAACGGGAGCAAGAGGTGGGACGACGGTCGAACACCCGAGGACGCCTTG AAGGACCTCGGGGTGTCTAGGCTAACTCCCAGAGATGCGGCACGGCTGCA CTCTTCCCTTAGGGCTGCCCAGGTCAACGTTGTGGCTTCTAGGATGAAGT GGGCTGCGTTGCTGAAGGAGACGGACACGGTGAGATTAATCAACGGGGGC GTGTGGGTGTAGGGTGAGATGGAACGGAGAGCGAAATGGGATGGAAAACC TTGTATGCGTTGACGAAGACCGACACGGGTGTTTTGTAGTTGGTGGGATT CAAGGGGACGTGATGGGGAAGGAGTGAGATGGGATGAAGTACCATGGATA TGGAAAATGTGTTATTGGGACGATAGCGTGGAACGTGGCAGTGCTTCTAG ATATTGGGAGAGGGGCATAATCGTTTGTCTGTCTGTCTGTTTACCTGCTC TGTCTCACTCTTGTCTCTCTCTCCCTCCCTCTTCCTCTCTGTGCGCCCCT CTCTTGCTCTCCCTCCATCTCCCACCTCTGCGTTTCTCGCCCACGACGTG CAACCAAATCGCAGCTGCTGTGCATCGTAAACAACGAAATCCCGTGGGGT GACGCGGTTTGCGAGACCACACCCGGGGAGACCGTGTGTCATTATCTCCG CACGGTACTAAGACGAACTGGTAACCGCGCTGGATGGGTCTGGCGGGCAT ACCTCAGGGCACTCGTGTGCAAGGCGTTGGCTTTGCTGTGTGCAGGGCTG AGCGGGGTCATTCTGTGGAGCGAGGTGCGAGGCCCTTTTGGTGTTTTGGT G
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6824:544..4794-

>mRNA_Ecto-sp13_S_contig6824.17776.1 ID=mRNA_Ecto-sp13_S_contig6824.17776.1|Name=mRNA_Ecto-sp13_S_contig6824.17776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1230bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6824:544..4794- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTACGCAAGAGGATACAGAGACGGTTTTCACGACCGACGCCATCGC
GTTCGAGGTGGCCTTGCTCGTCGCCTTTACGGCCGGGTTGGTATGGTACT
ATGCAGCGAAGGATGTGCCATTCTTGGTGAGCGTGTGCGTCTTCACCTCT
TGGCTGCTGGGGTTTATTGGAACGCTGTTGCTGCCTGCGGACATCGTCCT
AACGCTACTCAACGGCTCTCATAGTCTTTGGATGACGAGGGTGTGGTACG
CGGTGTACTGGACGACTTTCCTGCTTGCCTGGGTCATCCTGCCCATCCTC
TACCAGGCGTGGAACGCGGGGGAGCTGACATGGGCGGAGCGGATCCGGCG
CGCCGTGCGGCTCAACATCAAGCAGTACCTTGCCATGGCGGTGCTTCTTG
TGGTGTTTGTCATCTACCTGGTTGTCAGTGGGCAGACCAGCGCGGGGAGC
GTGAGCGGGTTTATGATGGCCCTGGCAAACACGTACGGTCTTCTATTTAT
CATCCTGCTGTTGGGGCAGGGGCTGATTCAGGTGCCTAGGCAGCTGTGGG
AGACCAGCTTCAACGACACAGAGCTACAAAGGCTCTACTTCAACGCTACA
CAGGTGGACACAGACAAGCACGACTCGTTGTTTGAGCTGGAAACGTTGGA
GCGAAACCTAGACTCGATGGAGCGTGCCATGGACATCAAGAAGCACTGGT
GTATCAAGGACCGAGCGCACATGAAGAACATGCTAAGCTCGGCTAGAGCT
ACGGATGAGGCATTTCACTTGGAGACCGACGACGGTTCCTTCCAGACTAC
GAGGTTCAGGGGCAAGAACGGGAGCAAGAGGTGGGACGACGGTCGAACAC
CCGAGGACGCCTTGAAGGACCTCGGGGTGTCTAGGCTAACTCCCAGAGAT
GCGGCACGGCTGCACTCTTCCCTTAGGGCTGCCCAGGTCAACGTTGTGGC
TTCTAGGATGAAGTGGGCTGCGTTGCTGAAGGAGACGGACACGCTGCTGT
GCATCGTAAACAACGAAATCCCGTGGGGTGACGCGGTTTGCGAGACCACA
CCCGGGGAGACCGTGTGTCATTATCTCCGCACGGTACTAAGACGAACTGG
TAACCGCGCTGGATGGGTCTGGCGGGCATACCTCAGGGCACTCGTGTGCA
AGGCGTTGGCTTTGCTGTGTGCAGGGCTGAGCGGGGTCATTCTGTGGAGC
GAGGTGCGAGGCCCTTTTGGTGTTTTGGTG
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