prot_Ecto-sp13_S_contig6823.17775.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6823.17775.1
Unique Nameprot_Ecto-sp13_S_contig6823.17775.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length899
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6823.17775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 580..598
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 343..364
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 554..579
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 664..683
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 297..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 717..741
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 324..342
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 619..638
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 712..716
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 599..618
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 639..658
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 742..898
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..275
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 276..296
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 303..323
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 659..663
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 365..553
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 684..689
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 690..711
NoneNo IPR availableTMHMMTMhelixcoord: 716..738
NoneNo IPR availableTMHMMTMhelixcoord: 276..298
NoneNo IPR availableTMHMMTMhelixcoord: 557..579
NoneNo IPR availableTMHMMTMhelixcoord: 690..712
NoneNo IPR availableTMHMMTMhelixcoord: 589..611
NoneNo IPR availableTMHMMTMhelixcoord: 342..364
NoneNo IPR availableTMHMMTMhelixcoord: 305..327
NoneNo IPR availableTMHMMTMhelixcoord: 638..660
NoneNo IPR availableTMHMMTMhelixcoord: 664..683

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6823contigEcto-sp13_S_contig6823:215..3217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6823.17775.1mRNA_Ecto-sp13_S_contig6823.17775.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6823 2..3464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6823.17775.1 ID=prot_Ecto-sp13_S_contig6823.17775.1|Name=mRNA_Ecto-sp13_S_contig6823.17775.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=899bp
MMCIKVVLALRIYINNISNDSLFWNSVQTGCHAGETRPKASRGLERLVDT
PAGARYAQLRPSTPPMAETVGVAHQGSTTQQQIVNSPPVSPGMPVGGANA
QDRNKTGVGDSEDPVRDRDRTPSSAGVGGAPGGGVTGEGVSMGAGPLFAP
FSRPNSSGIPAGSGVAGRGRAVVGGAQPQSTPHRTAVTNVGLPSAALGSS
GASSRNAPGLGRGQAPTSSPKQLSRLVRRSGPQPVGPQPVGMVSMYGDAA
VLPVQRVSTDEEAQTQWRAKHPAEAMSVPLAVLVLIVNIVAGASVFSRDN
HSLELEVPVCVLILFATLFAPIYTHMYQQRPWYGDWSSTTHLADLVVVAS
DLTARLGCGNALLLRFYPSRMRGEIGERITMAATYCKLWNWIVGHRQLGH
DLSREFVQKSIGWLSASGCMLVDTDGRVSPNRDLTWLVVTLNRCLRENKL
KETDEEEVKRGLAGIAPLGELVLPPVLAAKTGPKVAKGGIREVWMKEAGV
YWRISDSSIRIAWSGDNKGIGYVGGILVRVSQSDASVGWRVAERDGKALL
RGDLTLPGVNLVASIVGYANTMFGVAFLIGRELSRGYWVVFANTLGEVVS
ILIVAGPSLGLGDIRAWWVMADPTNGLRALTRSSRGNCMGILVVEALSSL
TGAVIAALGSGSDYVWAAAGAISGVITIIVGFTPGAIAKASIACLSVFVV
GVAGEIALLAITQGSDWLTWCVVACSTAEVILLGFLLLDLVRASRTKRRV
LGRENNRAERPTNAIGERPTLKGGQYDSLGIGVGTPEPVLSVGGIRGSSK
WPPSTIIRAGGFRHGIRSFHCDDVPQNIADISDGWMVLRETRARPAEQSG
STNAHAFGFEFWGFLVKLANGGAHPILSTHAFPDAILSPRGRDQSMGV*
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