prot_Ecto-sp13_S_contig12092.1776.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12092.1776.1
Unique Nameprot_Ecto-sp13_S_contig12092.1776.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length310
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12092.1776.1 vs. uniprot
Match: A0A6H5JZI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI2_9PHAE)

HSP 1 Score: 535 bits (1378), Expect = 1.370e-175
Identity = 281/310 (90.65%), Postives = 287/310 (92.58%), Query Frame = 0 
Query:    1 MTDSSPRARASDASGSRIFGSPGYGKNYPAAAAVAAVPARDPVAAIDQQRRGRVGDSPAHGAGASAVGGHTRGSVSEGGNGAASTTASVVRVPPPMPNTIVLPSTEVRLGLPHSNISPLLKAERGVFPFVPDGAEKDKEDEALQASAGAEAVVRDCLYNSHGMVALDGYLWKPGSIRLVRRWMMLVDNTLYYFVKPGDRKPRGVISLPGCIAEAVSSDEQEPAGEDLAARKEKEPRKSRVPNGYYGLRLFRPNHHGKDSNARLFLAKTAQERDDWVVELRVASRVVPLEDSFQIKALLRKGAFASVSETV 310
            MTDSSPRARASDASGSRIF SPGYGK  PAAAAV   PARDPVA IDQQRRG VGDSPAHGAG    GGHTR SVSEGGNGAA+T ASV RVPPPMPNTIVLPSTEV+LGLPHSNISPLLKAERGVFPFVPDGAEKDK +EALQASAGAE VVRDCLYNSHGMVALDGYLWKPGSIRLVRRWMMLVDNTLYYFVKPGDRK RGVISLPGCIAEAVSSDEQEPAGEDL+ARKEKEPRKSRVPNGYYGLRLFRPNHHGKDSNARLFLAKTAQERD+WV ELRVASRVVPLED F+IKALLRKGAFASV   V
Sbjct:  871 MTDSSPRARASDASGSRIFSSPGYGKKDPAAAAV---PARDPVAVIDQQRRGMVGDSPAHGAG----GGHTRASVSEGGNGAAATAASVARVPPPMPNTIVLPSTEVQLGLPHSNISPLLKAERGVFPFVPDGAEKDKGEEALQASAGAEEVVRDCLYNSHGMVALDGYLWKPGSIRLVRRWMMLVDNTLYYFVKPGDRKARGVISLPGCIAEAVSSDEQEPAGEDLSARKEKEPRKSRVPNGYYGLRLFRPNHHGKDSNARLFLAKTAQERDEWVAELRVASRVVPLEDIFEIKALLRKGAFASVHRCV 1173
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12092.1776.1 vs. uniprot
Match: D8LD50_ECTSI (Asparagine-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD50_ECTSI)

HSP 1 Score: 504 bits (1299), Expect = 1.240e-174
Identity = 271/312 (86.86%), Postives = 275/312 (88.14%), Query Frame = 0 
Query:    1 MTDSSPRARASDASGSRIFGSPGYGKNYPAAAAVAAVPARDPVAAIDQQRRGRVGDSPAHGAGASAVGGHTRGSVSEGGNGAASTT--ASVVRVPPPMPNTIVLPSTEVRLGLPHSNISPLLKAERGVFPFVPDGAEKDKEDEALQASAGAEAVVRDCLYNSHGMVALDGYLWKPGSIRLVRRWMMLVDNTLYYFVKPGDRKPRGVISLPGCIAEAVSSDEQEPAGEDLAARKEKEPRKSRVPNGYYGLRLFRPNHHGKDSNARLFLAKTAQERDDWVVELRVASRVVPLEDSFQIKALLRKGAFASVSETV 310
            MTDSSPRARASDASGSRIF SPG+GKN PAAAA  AVPARDPVAAIDQQRRGR GDSPAHGA                          ASV RVPPPMPNTIVLPSTEVRLGLPHSNISPLLKAERGVFPFVPDGAEKDKE+EALQASAGAEAVVRDCLYNSHGMVALDGYLWKPGSIRLVRRWMMLVDNTLYYFVKPGDRKPRGVISLPGCIAEAVSSDEQEPAGEDLAARKEKEPRKSRVPNGYYGLRLFRPNHHGKDSNARLFLAKTAQ+RD+WV ELRVASRVVPLED FQIKALLRKGAFASV   V
Sbjct:    1 MTDSSPRARASDASGSRIFSSPGFGKNDPAAAA--AVPARDPVAAIDQQRRGRGGDSPAHGAXXXXXXXXXXXXXXXXXXXXXXXXXXASVARVPPPMPNTIVLPSTEVRLGLPHSNISPLLKAERGVFPFVPDGAEKDKEEEALQASAGAEAVVRDCLYNSHGMVALDGYLWKPGSIRLVRRWMMLVDNTLYYFVKPGDRKPRGVISLPGCIAEAVSSDEQEPAGEDLAARKEKEPRKSRVPNGYYGLRLFRPNHHGKDSNARLFLAKTAQDRDEWVAELRVASRVVPLEDIFQIKALLRKGAFASVHRCV 310
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12092.1776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZI2_9PHAE1.370e-17590.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD50_ECTSI1.240e-17486.86Asparagine-rich protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 164..286
e-value: 2.1E-11
score: 53.9
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 166..282
e-value: 2.7E-10
score: 40.7
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 163..284
score: 11.236
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 160..285
e-value: 5.2E-14
score: 54.3
NoneNo IPR availablePANTHERPTHR22902PH DOMAIN-CONTAININGcoord: 132..292
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 161..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12092contigEcto-sp13_S_contig12092:479..3892 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12092.1776.1mRNA_Ecto-sp13_S_contig12092.1776.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12092 479..3892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12092.1776.1 ID=prot_Ecto-sp13_S_contig12092.1776.1|Name=mRNA_Ecto-sp13_S_contig12092.1776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=310bp
MTDSSPRARASDASGSRIFGSPGYGKNYPAAAAVAAVPARDPVAAIDQQR
RGRVGDSPAHGAGASAVGGHTRGSVSEGGNGAASTTASVVRVPPPMPNTI
VLPSTEVRLGLPHSNISPLLKAERGVFPFVPDGAEKDKEDEALQASAGAE
AVVRDCLYNSHGMVALDGYLWKPGSIRLVRRWMMLVDNTLYYFVKPGDRK
PRGVISLPGCIAEAVSSDEQEPAGEDLAARKEKEPRKSRVPNGYYGLRLF
RPNHHGKDSNARLFLAKTAQERDDWVVELRVASRVVPLEDSFQIKALLRK
GAFASVSETV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf