prot_Ecto-sp13_S_contig6822.17773.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6822.17773.1
Unique Nameprot_Ecto-sp13_S_contig6822.17773.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length167
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6822.17773.1 vs. uniprot
Match: D7G1P8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P8_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 4.650e-83
Identity = 150/160 (93.75%), Postives = 155/160 (96.88%), Query Frame = 0 
Query:    1 MLANIARAAARPSAGLLRRAAAATTKCASPSVPAAAVSSAPKNLRCASSLSEVLKAEIEEERLVAFDEDVASMVKELGKKGITVKDEPGLSLVRLFGPGVGDEKVTVEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQGKGEEXXXXXXXXGDMVGPG 160
            MLAN+ARAAARPSAGL+RRAAAATTKC+SPSVPAAAVSSAPKNLRCASSLSEVLKAEIEEERLVAFDEDVASMVKELGKKGITVKDEPGLSLVRLFGPGVGDEKV+VEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQGK   XXXXXXX  DM+GPG
Sbjct:    1 MLANLARAAARPSAGLVRRAAAATTKCSSPSVPAAAVSSAPKNLRCASSLSEVLKAEIEEERLVAFDEDVASMVKELGKKGITVKDEPGLSLVRLFGPGVGDEKVSVEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQGKXXXXXXXXXXEDDMIGPG 160
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6822.17773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1P8_ECTSI4.650e-8393.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003428Mitochondrial glycoproteinPFAMPF02330MAM33coord: 54..141
e-value: 1.5E-5
score: 25.1
IPR036561Mitochondrial glycoprotein superfamilyGENE3D3.10.280.10coord: 41..158
e-value: 2.0E-6
score: 29.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6822contigEcto-sp13_S_contig6822:3243..5178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6822.17773.1mRNA_Ecto-sp13_S_contig6822.17773.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6822 3243..5178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6822.17773.1 ID=prot_Ecto-sp13_S_contig6822.17773.1|Name=mRNA_Ecto-sp13_S_contig6822.17773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp
MLANIARAAARPSAGLLRRAAAATTKCASPSVPAAAVSSAPKNLRCASSL
SEVLKAEIEEERLVAFDEDVASMVKELGKKGITVKDEPGLSLVRLFGPGV
GDEKVTVEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQGKGEEGQEDE
GDEGDMVGPGKTPVSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003428MAM33
IPR036561MAM33_sf