mRNA_Ecto-sp13_S_contig6820.17770.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6820.17770.1 vs. uniprot
Match: A0A6H5KXR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR1_9PHAE) HSP 1 Score: 290 bits (741), Expect = 7.660e-86 Identity = 236/309 (76.38%), Postives = 247/309 (79.94%), Query Frame = 2
Query: 2 LKGLLECGRSLRMEGTFQGNLISTGRVVVAPTGKIKGDLKGLKFLLVEGQVVGDVVCDEVMVVDEGKVFGDISSARVTVGPQSTIRGRLTVVEDMDELAQLLSSEEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAPEDTAVSGKNDGLVEDESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDEGREDQEHAEKEDDLEDSAGVVAIATADAAAKAVEGGEVDAVMAGVEKGMVVSVKEQHPKDGEGDVCTLITPEDSKEDYEDAMDDLAGLSFA 928
LKG+LECGRSLRMEGTFQG+LISTGRVVVAPTG DVVCDEVMVV+EGKVFGDISSARVTVGPQSTIRGRLTVVEDMDELAQLL SEEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GDAPEDTAVSGK+DGL XXXXXXXXXXXXXXXXXXXXXXXXXX SDEG+EDQE+A+KEDDLED+AGVVAIATADAA KAVEGGEVD AGVE+ MVVSV EQHPKDGEGD CTL+TPEDSKED+EDAMDDLAGLSFA
Sbjct: 714 LKGMLECGRSLRMEGTFQGDLISTGRVVVAPTGXXXXXXXXXXXXXXXXXXXXDVVCDEVMVVNEGKVFGDISSARVTVGPQSTIRGRLTVVEDMDELAQLLLSEEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-------------------GDAPEDTAVSGKDDGLXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXEPEAETESDEGQEDQEYADKEDDLEDAAGVVAIATADAAGKAVEGGEVDTATAGVEEAMVVSVMEQHPKDGEGDACTLVTPEDSKEDFEDAMDDLAGLSFA 1001
BLAST of mRNA_Ecto-sp13_S_contig6820.17770.1 vs. uniprot
Match: D8LQJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ1_ECTSI) HSP 1 Score: 247 bits (631), Expect = 1.040e-75 Identity = 196/310 (63.23%), Postives = 206/310 (66.45%), Query Frame = 2
Query: 2 LKGLLECGRSLRMEGTFQGNLISTGRVVVAPTGKIKGDLKGLKFLLVEGQVVGDVVCDEVMVVDEGKVFGDISSARVTVGPQSTIRGRLTVVEDMDELAQLLSSEEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAPEDTAVSGKNDGLVEDESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDEGREDQEHAEKEDDLEDSAGVVAIATADAAAKAVEGGEVDAVMAGV-EKGMVVSVKEQHPKDGEGDVCTLITPEDSKEDYEDAMDDLAGLSFA 928
L GLLECGRSLRMEGTFQG+LISTGRVVVAPTGKIKG LKGLKFLLVEGQV GDVVC+EVMVV+EGKVFGDISSARVTVGPQ DTAVSGK+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EG+ED+E+AEKED ED+AGVVAIATADAAAKAVEGGEVD AGV E+ MVVSVKEQHPKDGEGD CTL+TPEDSKEDYEDAMDDLAGLSFA
Sbjct: 126 LTGLLECGRSLRMEGTFQGDLISTGRVVVAPTGKIKGHLKGLKFLLVEGQVDGDVVCEEVMVVNEGKVFGDISSARVTVGPQ----------------------------------------------------------------------------------DTAVSGKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQEDEEYAEKEDGSEDAAGVVAIATADAAAKAVEGGEVDTATAGVVEEAMVVSVKEQHPKDGEGDACTLVTPEDSKEDYEDAMDDLAGLSFA 353
BLAST of mRNA_Ecto-sp13_S_contig6820.17770.1 vs. uniprot
Match: A0A6M1ZQA3_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZQA3_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 4.360e-10 Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 2
Query: 8 GLLECGRSLRMEGTFQGNLISTGRVVVAPTGKIKGDLKGLKFLLVEGQVVGDVVCDE-VMVVDEGKVFGDISSARVTVGPQSTIRGRLTV 274
G L+ R LR++GTF+G LIS G+V+V P GK+K +L LK +++G+V G++ C E V + DE V GDI + ++V TI G + V
Sbjct: 78 GELKFDRLLRIDGTFEGELISEGKVIVGPKGKVKANLN-LKAAIIQGEVEGNITCKERVELRDEAVVTGDIQAKLLSVDEGVTIVGNVLV 166
BLAST of mRNA_Ecto-sp13_S_contig6820.17770.1 vs. uniprot
Match: A0A6G0WCC1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCC1_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 7.550e-10 Identity = 34/92 (36.96%), Postives = 60/92 (65.22%), Query Frame = 2
Query: 2 LKGLLECGRSLRMEGTFQGNLISTGRVVVAPTGKIKGDLKGLKFLLVEG-QVVGDVVCDEVMVVDEGKVFGDISSARVTVGPQSTIRGRLTV 274
+KG L R LR+EG F+G LIS G +VV G + G++ G+K +LV G +V+G++ D +++ D+G++FG++++ V + P + G L +
Sbjct: 87 MKGELSFERLLRIEGEFEGKLISKGSLVVGHKGLLNGNIDGMKEVLVAGGRVLGNIQVDRLVLRDKGQIFGNVTAKSVRIDPDCILVGTLNI 178
BLAST of mRNA_Ecto-sp13_S_contig6820.17770.1 vs. uniprot
Match: D7G0L1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L1_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 4.010e-9 Identity = 35/87 (40.23%), Postives = 57/87 (65.52%), Query Frame = 2
Query: 2 LKGLLECGRSLRMEGTFQGNLIST-GRVVVAPTGKIKGDLKGLKFLLVEGQVVGDVVCDEVMVVDEGKVFGDISSARVTVGPQSTIR 259
+KG LE R LR++G F+G LI+ G +VV P G++ GDLK ++ + VEG V G+V ++V + + G + GD+ +T+ P ++IR
Sbjct: 101 MKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFANDVKIKNAGMLLGDVQCMCLTLDPTASIR 187
BLAST of mRNA_Ecto-sp13_S_contig6820.17770.1 vs. uniprot
Match: A0A5D6Y579_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y579_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 6.260e-9 Identity = 35/99 (35.35%), Postives = 61/99 (61.62%), Query Frame = 2
Query: 2 LKGLLECGRSLRMEGTFQGNLISTGRVVVAPTGKIKGDLKGLKFLLVEG-QVVGDVVCDEVMVVDEGKVFGDISSARVTVGPQSTIRGRLTVVEDMDEL 295
+KG L R LR+EG F+G L+S G +VV G + G ++ +K + V G ++VG++ +++++ D+ +VFG+I++ V + P + GRL V EL
Sbjct: 97 MKGELSFERLLRIEGEFEGKLVSKGSLVVGAKGVLTGPVENMKEVHVTGGKIVGNITVEKLVLRDKAQVFGNITAKTVKIDPDCVVVGRLNVNPQAPEL 195
BLAST of mRNA_Ecto-sp13_S_contig6820.17770.1 vs. uniprot
Match: F0VZS1_9STRA (Uncharacterized protein AlNc14C3G400 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZS1_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 3.290e-8 Identity = 33/92 (35.87%), Postives = 56/92 (60.87%), Query Frame = 2
Query: 2 LKGLLECGRSLRMEGTFQGNLISTGRVVVAPTGKIKGDLKGLKFLLVEG-QVVGDVVCDEVMVVDEGKVFGDISSARVTVGPQSTIRGRLTV 274
++G L R LR+EG F G L+S G +VV G + GD+ +K + + G ++VG++ ++V++ D+ VFG+I++ + V P I G L V
Sbjct: 101 MRGELSFERLLRIEGEFDGKLVSKGSLVVGTKGCLLGDVDSMKEVFITGGKIVGNIAVEKVVLRDKASVFGNITAKSIKVDPDCVIVGTLNV 192
BLAST of mRNA_Ecto-sp13_S_contig6820.17770.1 vs. uniprot
Match: A0A7S3ZTD0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTD0_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 4.240e-8 Identity = 29/91 (31.87%), Postives = 57/91 (62.64%), Query Frame = 2
Query: 2 LKGLLECGRSLRMEGTFQGNLISTGRVVVAPTGKIKGDLKGLKFLLVEGQVVGDVVCDEVMVVDEGKVFGDISSARVTVGPQSTIRGRLTV 274
++G L R LR++G F+G+L+STG ++V P G++ GD++ + L+V G+V+G++ D + + ++GD++ + + P + G L V
Sbjct: 130 IEGTLRFERLLRLDGKFEGDLVSTGDLIVGPRGELVGDVRDMADLVVFGKVIGNINVDHLELCGAASIYGDVTCKTLLMDPTVVLVGTLNV 220
BLAST of mRNA_Ecto-sp13_S_contig6820.17770.1 vs. uniprot
Match: F0Y5F7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5F7_AURAN) HSP 1 Score: 65.9 bits (159), Expect = 5.530e-8 Identity = 30/91 (32.97%), Postives = 55/91 (60.44%), Query Frame = 2
Query: 2 LKGLLECGRSLRMEGTFQGNLISTGRVVVAPTGKIKGDLKGLKFLLVEGQVVGDVVCDEVMVVDEGKVFGDISSARVTVGPQSTIRGRLTV 274
++G L R LR++G F+G LIS G ++V P G++ GD+K + ++V G+V+G++ D V + ++GDI+ + + P + G L +
Sbjct: 369 IEGKLRFERLLRLDGKFEGELISEGDLIVGPQGELVGDVKTMSDIVVFGKVIGNIAVDRVELCGSASIYGDITCKVLLMDPTVVLVGNLNI 459
BLAST of mRNA_Ecto-sp13_S_contig6820.17770.1 vs. uniprot
Match: A0A6H5JN16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN16_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 7.020e-8 Identity = 31/91 (34.07%), Postives = 59/91 (64.84%), Query Frame = 2
Query: 2 LKGLLECGRSLRMEGTFQGNLISTGRVVVAPTGKIKGDLKGLKFLLVEGQVVGDVVCDEVMVVDEGKVFGDISSARVTVGPQSTIRGRLTV 274
+KG L R LR++G+F+G L+STG +V+ TG ++G+++ L+ ++ +G VVG++ + V + V G+I+ +++ P +I G+L V
Sbjct: 81 VKGELSFDRLLRVDGSFKGQLVSTGDLVIGATGIVRGNIEHLREVVSDGTVVGNIQAERVRLRRSAIVIGNITCYSLSMDPDVSISGKLNV 171 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6820.17770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6820.17770.1 >prot_Ecto-sp13_S_contig6820.17770.1 ID=prot_Ecto-sp13_S_contig6820.17770.1|Name=mRNA_Ecto-sp13_S_contig6820.17770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=298bp MEGTFQGNLISTGRVVVAPTGKIKGDLKGLKFLLVEGQVVGDVVCDEVMVback to top mRNA from alignment at Ecto-sp13_S_contig6820:3574..6569- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6820.17770.1 ID=mRNA_Ecto-sp13_S_contig6820.17770.1|Name=mRNA_Ecto-sp13_S_contig6820.17770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2996bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6820:3574..6569- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6820:3574..6569- >mRNA_Ecto-sp13_S_contig6820.17770.1 ID=mRNA_Ecto-sp13_S_contig6820.17770.1|Name=mRNA_Ecto-sp13_S_contig6820.17770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=894bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6820:3574..6569- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |