prot_Ecto-sp13_S_contig6812.17755.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6812.17755.1
Unique Nameprot_Ecto-sp13_S_contig6812.17755.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length451
Homology
BLAST of mRNA_Ecto-sp13_S_contig6812.17755.1 vs. uniprot
Match: D8LHP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP2_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 6.770e-102
Identity = 367/439 (83.60%), Postives = 371/439 (84.51%), Query Frame = 0
Query:    1 MKKKYAEQDDDDRKLAMEALGKAPSQEDGDTGXXXXXXXXXRPGDRXXXXXXXXXXXXXXSKNLRKTEAELAATLAGLDADVRGRLSELVKPDELDPFEVRALGKFDTADALDILDRFAEADLRKVRNRSGFLAGIMRKHGSASTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC----PVEGXXXXXXXXXXXXXXXXXXXXXXEAGSHSGEKAAGEREGDGEQRDAAPRPENQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKHKVKLTPGKQKRGKASKQAIEVFSRSKDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAKKKANKKIAQRDPQKSA 435
            MKKKYAEQDDDDRKLAMEALGK P        XXXXXXXXXRPGDRXXXXXXXXXXXXXXSKNLRKTEAELAAT+A LDADVRGRLSELVKPDELDPFEVRALGKFDTADALDILDRFAEADLR+VRNRSGFLAGIMRKHGSASTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXX         PVEG       XXXXXXXXXXXXXXX                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYK+KVKLTPGKQKRGKASKQAIEVFSRS+DTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAKKKANKKIAQRDPQKSA
Sbjct:  927 MKKKYAEQDDDDRKLAMEALGKGPXXXXXXXXXXXXXXXXXRPGDRXXXXXXXXXXXXXXSKNLRKTEAELAATVAALDADVRGRLSELVKPDELDPFEVRALGKFDTADALDILDRFAEADLRRVRNRSGFLAGIMRKHGSASTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATSVSASXXXXXXXXXXXXXXXXXXXXXXXXXXKRQAAGEASPVEGGDEAPVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAKKKANKKIAQRDPQKSA 1365          
BLAST of mRNA_Ecto-sp13_S_contig6812.17755.1 vs. uniprot
Match: A0A388M4N2_CHABU (CCHC-type domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M4N2_CHABU)

HSP 1 Score: 119 bits (298), Expect = 5.600e-25
Identity = 62/109 (56.88%), Postives = 83/109 (76.15%), Query Frame = 0
Query:  320 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKHKVKLTPGKQKRGKASKQAIEVFSRSKDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAKKKANKKIAQ 428
            +ELD LTG PR++DVLL+AVPVCGPY +L++YK++VKLTPG  K+GKA++ A+EVF+R+ D    QK LMK + + E VA MIG+VKVA  GL +  Q +KKA K  A+
Sbjct: 1276 TELDSLTGVPREDDVLLYAVPVCGPYSALQNYKYRVKLTPGTVKKGKAARTAVEVFARTVDVSPRQKDLMKAVPETELVAVMIGNVKVAAPGLMKIRQDQKKAKKVAAK 1384          
BLAST of mRNA_Ecto-sp13_S_contig6812.17755.1 vs. uniprot
Match: A0A061RK70_9CHLO (Nuclear export mediator factor nemf-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RK70_9CHLO)

HSP 1 Score: 112 bits (281), Expect = 6.400e-25
Identity = 53/105 (50.48%), Postives = 81/105 (77.14%), Query Frame = 0
Query:  320 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKHKVKLTPGKQKRGKASKQAIEVFSRSKDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAKKKANK 424
            +ELD LTG PR +D+LLFA+PVC PY +L  YK++VKLTPG+QK+GKA+K+A+++F R  +  + +K L++ +TD E V+ M+G V++++ GLA A  A++KA K
Sbjct:  144 TELDSLTGIPRXDDLLLFAIPVCAPYAALNGYKYRVKLTPGRQKKGKAAKEALDIFGRVNEATSREKELIRAVTDTEAVSGMVGPVQISMPGLAAAKAAQRKAKK 248          
BLAST of mRNA_Ecto-sp13_S_contig6812.17755.1 vs. uniprot
Match: A0A7S2HPI5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPI5_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.950e-24
Identity = 58/112 (51.79%), Postives = 80/112 (71.43%), Query Frame = 0
Query:  320 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKHKVKLTPGKQKRGKASKQAIEVFSRSKDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAK---KKANKKIAQ 428
            +EL++LTG P   DV++F VPVCGPY SL+ YK+KVKLTPG  K+G+A KQA++VF+R K+    ++ L+K ++DNE V  +IG+VKV+  GL  A  AK   KKA K  +Q
Sbjct:   23 TELNKLTGLPLPSDVIMFCVPVCGPYQSLQRYKYKVKLTPGSTKKGRAGKQALDVFTRMKECSPRERDLIKFVSDNELVQTIIGEVKVSTPGLHAAFNAKRSTKKAGKNKSQ 134          
BLAST of mRNA_Ecto-sp13_S_contig6812.17755.1 vs. uniprot
Match: A0A1E7FRS9_9STRA (DUF814-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRS9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 5.190e-24
Identity = 62/114 (54.39%), Postives = 81/114 (71.05%), Query Frame = 0
Query:  320 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKHKVKLTPGKQKRGKASKQAIEVFSRSKDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAKKKANKKIAQRDPQK 433
            +ELD+LTGKP  ED++LFAVPVC PY SL  Y ++VKLTPG  KRGKASKQ I++F R    P   +GL+K + DNE V A+ GDVK++ AG ++A Q K KA  K ++R+  K
Sbjct:  909 AELDKLTGKPLGEDLILFAVPVCAPYQSLSKYAYRVKLTPGNMKRGKASKQCIDMFLRESAVPEHCRGLIKNVADNEWVQAICGDVKISAAGASKAIQ-KSKAKSKASKRNKNK 1021          
BLAST of mRNA_Ecto-sp13_S_contig6812.17755.1 vs. uniprot
Match: UPI000B8CF237 (nuclear export mediator factor NEMF-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CF237)

HSP 1 Score: 105 bits (261), Expect = 2.010e-23
Identity = 53/105 (50.48%), Postives = 73/105 (69.52%), Query Frame = 0
Query:  320 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKHKVKLTPGKQKRGKASKQAIEVFSRSKDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAKKKANK 424
            +++D LTG P   D+LL+AVPVCGPY +L+ YK++VK+ PG  K+GKA+K A+ +FS   +    +K LMK  TD E VAA+IG+VK+  AGL Q  Q +KK  K
Sbjct:   23 NDMDYLTGNPLSSDILLYAVPVCGPYSALQSYKYRVKIIPGSAKKGKAAKTAMNLFSHMSEATNREKELMKACTDPELVAAIIGNVKITAAGLTQLKQKQKKGKK 127          
BLAST of mRNA_Ecto-sp13_S_contig6812.17755.1 vs. uniprot
Match: A0A6U1AHC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AHC6_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.050e-22
Identity = 59/105 (56.19%), Postives = 80/105 (76.19%), Query Frame = 0
Query:  321 ELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKHKVKLTPGKQKRGKASKQAIEVFSRSKDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAKKKANKK 425
            +L+RLTG P  +DVLLF +PVC PY SL  YK +VKLTPG QK+GKA KQ+++VF RSK+  + ++ L++ ++DNE V ++IGDVKV+  GL QA Q  K+ANKK
Sbjct: 1110 DLNRLTGVPHVDDVLLFCIPVCAPYQSLNGYKFRVKLTPGTQKKGKAGKQSMDVFQRSKECTSRERDLIRMVSDNELVHSIIGDVKVSTPGL-QAAQNAKRANKK 1213          
BLAST of mRNA_Ecto-sp13_S_contig6812.17755.1 vs. uniprot
Match: A0A1Y1IF78_KLENI (CCHC-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IF78_KLENI)

HSP 1 Score: 108 bits (270), Expect = 2.190e-22
Identity = 57/110 (51.82%), Postives = 76/110 (69.09%), Query Frame = 0
Query:  320 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKHKVKLTPGKQKRGKASKQAIEVFSRSKDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAKKKANKKIAQR 429
            +ELD LTG PR +D+LL+AVP+CGPY +L+  K KVKLTPG  K+GKA+K A+EVFSR  +    +K LMK + D + VA M+G+ KV   GL +  Q +KK  K  AQ+
Sbjct:  270 TELDALTGVPRADDILLYAVPMCGPYTALQGCKFKVKLTPGTAKKGKAAKTAVEVFSRMPEATRREKELMKAVQDPDLVAVMLGNAKVTAPGLTKMKQTQKKGRKASAQK 379          
BLAST of mRNA_Ecto-sp13_S_contig6812.17755.1 vs. uniprot
Match: A0A314ZFJ4_PRUYE (Nuclear export mediator factor Nemf n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314ZFJ4_PRUYE)

HSP 1 Score: 107 bits (266), Expect = 1.160e-21
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 0
Query:  320 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKHKVKLTPGKQKRGKASKQAIEVFSRSKDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAKKKANK 424
            +++D LTG P   D+LL+AVPVCGPY S++ YK++VK+TPG  KRGKA+K A+ +FS   +    +K LMK  TD E VAA+IG+VK+  AGL Q  Q +KK  K
Sbjct:  305 NDVDYLTGNPLPSDILLYAVPVCGPYSSVQSYKYRVKITPGSVKRGKAAKTAMNLFSHMTEATVREKELMKACTDPELVAAIIGNVKITSAGLTQLKQKQKKVKK 409          
BLAST of mRNA_Ecto-sp13_S_contig6812.17755.1 vs. uniprot
Match: A0A383VF94_TETOB (Uncharacterized protein (Fragment) n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VF94_TETOB)

HSP 1 Score: 108 bits (270), Expect = 1.480e-21
Identity = 58/108 (53.70%), Postives = 77/108 (71.30%), Query Frame = 0
Query:  321 ELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKHKVKLTPGKQKRGKASKQAIEVFSRSKDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAKKKANKKIAQ 428
            ELD LTG PR +DVL++AVPV GPY +L +YK KVKLTPG  K+GKA KQA+E+ +R ++    ++ LM+ + D + V AM+G VK++ AGL Q  QA KKA K  AQ
Sbjct:  636 ELDSLTGVPRADDVLMYAVPVVGPYAALANYKFKVKLTPGTLKKGKAVKQAVELLARGQEGLQRERELMRAVPDMDMVNAMVGTVKISAAGLQQLKQASKKAKKSAAQ 743          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6812.17755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHP2_ECTSI6.770e-10283.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A388M4N2_CHABU5.600e-2556.88CCHC-type domain-containing protein n=1 Tax=Chara ... [more]
A0A061RK70_9CHLO6.400e-2550.48Nuclear export mediator factor nemf-like n=1 Tax=T... [more]
A0A7S2HPI5_9STRA2.950e-2451.79Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1E7FRS9_9STRA5.190e-2454.39DUF814-domain-containing protein n=1 Tax=Fragilari... [more]
UPI000B8CF2372.010e-2350.48nuclear export mediator factor NEMF-like n=1 Tax=C... [more]
A0A6U1AHC6_9STRA1.050e-2256.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Y1IF78_KLENI2.190e-2251.82CCHC-type domain-containing protein n=1 Tax=Klebso... [more]
A0A314ZFJ4_PRUYE1.160e-2152.38Nuclear export mediator factor Nemf n=1 Tax=Prunus... [more]
A0A383VF94_TETOB1.480e-2153.70Uncharacterized protein (Fragment) n=1 Tax=Tetrade... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 280..300
NoneNo IPR availablePANTHERPTHR15239:SF6NUCLEAR EXPORT MEDIATOR FACTOR NEMFcoord: 1..424
NoneNo IPR availablePANTHERPTHR15239UNCHARACTERIZEDcoord: 1..424
IPR021846NFACT protein, C-terminalPFAMPF11923NFACT-Ccoord: 320..407
e-value: 3.2E-25
score: 88.1
IPR041337Heterogeneous nuclear ribonucleoprotein Q acidic domainPFAMPF18360hnRNP_Q_AcDcoord: 80..139
e-value: 5.5E-11
score: 42.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6812contigEcto-sp13_S_contig6812:1925..6673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6812.17755.1mRNA_Ecto-sp13_S_contig6812.17755.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6812 1359..7452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6812.17755.1 ID=prot_Ecto-sp13_S_contig6812.17755.1|Name=mRNA_Ecto-sp13_S_contig6812.17755.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=451bp
MKKKYAEQDDDDRKLAMEALGKAPSQEDGDTGGGGGRRRFLRPGDRAEAA
AAEAAAAAAASKNLRKTEAELAATLAGLDADVRGRLSELVKPDELDPFEV
RALGKFDTADALDILDRFAEADLRKVRNRSGFLAGIMRKHGSASTAAAES
AAPAAAATLPPPTPPGATEEEESAASASASAGEAAEAAATGVSPPSPPPE
DEREEGKRQAAGEACPVEGGEEAPVVPEEKEEAGGGGSDGGEAGSHSGEK
AAGEREGDGEQRDAAPRPENQEAGGEEEPLSRRAQKKREEEEVRKLLEEE
GAVGEDFDGGGGGGDGGGASELDRLTGKPRDEDVLLFAVPVCGPYMSLRD
YKHKVKLTPGKQKRGKASKQAIEVFSRSKDTPASQKGLMKGITDNECVAA
MIGDVKVAVAGLAQATQAKKKANKKIAQRDPQKSAKQAKGKGGKGSKGKK
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021846NFACT-C
IPR041337hnRNP_Q_AcD