mRNA_Ecto-sp13_S_contig681.17752.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig681.17752.1 vs. uniprot
Match: D8LPX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX9_ECTSI) HSP 1 Score: 717 bits (1850), Expect = 1.500e-257 Identity = 358/386 (92.75%), Postives = 368/386 (95.34%), Query Frame = 1
Query: 445 DRPLAMTRTGERRESPVRERNELERQDQEVGESTAVRGGDAGTKKIVVTHENLPRMKNVVILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGSHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTLFPNATEATLDTHQRLRDLVEREPEDTFYRFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSAEAAAFAARIPEPLPVSPHKEVTDGGTIGTSKSSIGKDGSGGMAQGRRGTGVSGSRRQEIADFLTERFETARDEDVKVTGAADRKSMFLSNRVLRVVHQMFKEDHEVLGHYFPPGEEEINTAGERRTTKAPPQ 1602
D PLA+TR G RRESPVRERNELERQDQE+ +TAVRGGDAG +KIVVTHENLP+MKNVVILR EGIIYCPIAKVASAEWKRSLRWMVGIEDWMG+HTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTLFPNATEATLDTHQ LRDLVEREPEDTFY FASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSAEAAAFAARIPEPLP+SPHKE TDGGT G SKSSIGKDG GGMAQG RGTGVSGSRRQEIADFLTERFETARD+DVKVTGAADRK+MFLSNRVLRVVHQMFKED+EVLG YFPPGEEEINTA RRTTK PPQ
Sbjct: 5 DHPLAITRFGGRRESPVRERNELERQDQELVGTTAVRGGDAGKEKIVVTHENLPKMKNVVILRGEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGNHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTLFPNATEATLDTHQTLRDLVEREPEDTFYHFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSAEAAAFAARIPEPLPISPHKEATDGGTAGISKSSIGKDGPGGMAQGGRGTGVSGSRRQEIADFLTERFETARDKDVKVTGAADRKNMFLSNRVLRVVHQMFKEDYEVLGQYFPPGEEEINTASGRRTTKTPPQ 390
BLAST of mRNA_Ecto-sp13_S_contig681.17752.1 vs. uniprot
Match: D7G2B9_ECTSI (Similar to dermatan 4-sulfotransferase-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B9_ECTSI) HSP 1 Score: 171 bits (434), Expect = 4.780e-46 Identity = 97/301 (32.23%), Postives = 144/301 (47.84%), Query Frame = 1
Query: 637 EGIIYCPIAKVASAEWKRSLRWMVGIEDWMGSHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTLFPNATEATLDTHQRLRDLVEREPEDTFYRFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSAEAAAFAARIPEPLPVSPHKEVTDGGTIGTSKSSIGKDGSGGMAQGRRGTGVSGSRRQEIADFLTERFETARDEDVKVTGAADRKSMFLSNRVLRVVHQMFKEDHEVLGHYF 1539
+G+IYCPIAKVA AEW+++LRWM+GI DW +H GKNG+ L I + D + +FVVVRDPA+RL+SAFLNKC+ + NC Y MP FP ++ T + R + EP F F G+ +++ G CKV N H++PQ CFC + ++HV+PF NMS EA + P P R + + +F+ +RF + ++D K GA ++ + S L V+ ++ +D+ + G YF
Sbjct: 10 DGMIYCPIAKVACAEWRKTLRWMLGIPDW--DTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQ----------NCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLTG--CKV-NSHWRPQHCFCSIARFRESYHVVPFANMSTEAVNLVDHMRRPSP---------------------------------------DRAELLREFIVQRFSS--NQDAKAQGATSKRERYFSQEALDVIKMVYGKDYSLFGEYF 254
BLAST of mRNA_Ecto-sp13_S_contig681.17752.1 vs. uniprot
Match: A0A6H5JC58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC58_9PHAE) HSP 1 Score: 155 bits (391), Expect = 8.000e-38 Identity = 79/190 (41.58%), Postives = 108/190 (56.84%), Query Frame = 1
Query: 637 EGIIYCPIAKVASAEWKRSLRWMVGIEDWMGSHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTLFPNATEATLDTHQRLRDLVEREPEDTFYRFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSA 1206
+G+IYCPIAKVA AEW+++LRWM+GI DW +H GKNG+ L I + D + +FVVVRDPA+RL+SAFLNKC+ + NC Y MP FP ++ T + R + EP F F G+ +++ G CKV N H++PQ CFC + ++HV+PF NMSA
Sbjct: 175 DGMIYCPIAKVACAEWRKTLRWMLGIPDW--DTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQ----------NCPYTEFMPQRFPGVSKRDAATDTKFRAAINDEPRKVFRDFMLGVQKDVRLRG--CKV-NSHWRPQHCFCSIARFRESYHVVPFANMSA 349
BLAST of mRNA_Ecto-sp13_S_contig681.17752.1 vs. uniprot
Match: A0A6H5JKQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ4_9PHAE) HSP 1 Score: 120 bits (301), Expect = 2.910e-26 Identity = 99/346 (28.61%), Postives = 143/346 (41.33%), Query Frame = 1
Query: 556 GGDAGTKKIVVTHE--------NLPR-MKNVVILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGSHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGA-PNCAYLSLMPTLFPNA-------TEATLDTHQRLRD-LVEREPEDTFYRFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSAEAAAFAARIPEPLPVSPHKEVTDGGTIGTSKSSIGKDGSGGMAQGRRGTGVSGSRRQEIADFLTERFETARDEDVKVTGAADRKSMFLSNRVLRVVHQMFKEDHEVLGHYF 1539
GG+ G + VV + LPR + L+ E I+YCPI KVA EW + RW+ G EDW H GL+ L+E +E L S + +F VVR+PA+RL+S FL KC R N + NC YL L P LF T +DT + + R + F + I +K+ D C N H+ PQ C C L P F ++ + NM+ AA AA +P S +R EI +FL +R +T + K T A R + L+ VH+ + +D+++ Y+
Sbjct: 77 GGEGGDRNGVVPSDVTGALVELELPRHFDGALALKSERIVYCPIQKVACTEWIKVFRWIDGHEDWAEPRHQKH-----GLDVLEEMDVERGNQILNSPDWLKFAVVREPAQRLLSCFLQKC-------NRYNMENEYSNCPYLELWPDLFDRERFPDGVPTRPGVDTLAIVWEAFTSRGRDSMFAPYVEVITRRVKQ--DPCG-QNKHWSPQYCHCSLDVTAPVFRIVGWANMTE--AASAAIVP--------------------------------------FASSSARGLEIKEFLVDRMDTNHERHGKKTSAGSRSQEAYTAEALQAVHEAYAKDYKLFSQYW 367
BLAST of mRNA_Ecto-sp13_S_contig681.17752.1 vs. uniprot
Match: A0A7S2ZYV0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYV0_9RHOD) HSP 1 Score: 65.9 bits (159), Expect = 4.350e-8 Identity = 53/205 (25.85%), Postives = 90/205 (43.90%), Query Frame = 1
Query: 619 VVILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGSHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTLFPNATEATLDTHQRLRDLVEREPEDTFYRFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSAEAAAFAARI 1233
+++ + I+CP+ KVA++ WK +R + G +D+M H +GL L ++ E + + L Y +FV VRDP RL+SA+++K V + Y + L+ H R D + + +F F +L K++ D N H+ PQ C E+ P V F N+ +A+ +I
Sbjct: 85 IIVSEKHKFIFCPVPKVANSNWKYLIRKIEGAKDYMDLAL-AHDQHTSGLRYLSDYSPEEVEYLLYKSGYHKFVFVRDPYTRLLSAYMDKLVNKYESKEE----------YRIWLGKLYDWK-------HVRESDFIN-DARPSFQAFVDELL---KQDPDRM---NEHWMPQAYVCGFGEV-PYDFVGRFENIERDASRVLQKI 263
BLAST of mRNA_Ecto-sp13_S_contig681.17752.1 vs. uniprot
Match: A0A812M394_9DINO (Chst8 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812M394_9DINO) HSP 1 Score: 65.5 bits (158), Expect = 6.790e-8 Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = 1
Query: 625 ILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGSHTNLHSAGK-NGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCV 894
++ I++C + K S+ W R LRW+ G DW G+ L S G GL RL+ E + ++ + VVRDP +RL SA+L++ V
Sbjct: 79 VIPSRRIVFCDVQKAGSSRWLRLLRWLAGSPDWDGNPHFLDSEGHPGGLRRLEHLPREEAVQIMRDPKWTKIAVVRDPLDRLRSAYLDRVV 169
BLAST of mRNA_Ecto-sp13_S_contig681.17752.1 vs. uniprot
Match: A0A812TG46_9DINO (Chst9 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812TG46_9DINO) HSP 1 Score: 62.4 bits (150), Expect = 5.440e-7 Identity = 50/196 (25.51%), Postives = 81/196 (41.33%), Query Frame = 1
Query: 622 VILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGSHTNLHSAGKNGLE----RLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLS--LMPTLFPNATEATLDTHQRLRDLVEREPEDTFYRFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPF 1191
+++ +++C I K ++ W R LRWM G++DW +N H A NGL +L+ ++ + + VVRDP +RL SA+L+K ++ P +L+ L F N T + F F S + M+ D + H+Q Q CDL LP + + F
Sbjct: 46 IVIPSHRLVFCHIPKAGTSRWLRILRWMAGVQDW---DSNPHFADANGLLGGLLQLKHLPTSEALRIMQDPAWTKMAVVRDPLDRLRSAYLDKILS----------ASDPQNHWLTENLFGLPFENFTSTS------------------FSNFLSRVEVGMRHSLDH---EDRHWQRQARLCDLGRFLPYYQHVFF 207
BLAST of mRNA_Ecto-sp13_S_contig681.17752.1 vs. uniprot
Match: A0A3Q3L6K5_9LABR (Carbohydrate sulfotransferase n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3L6K5_9LABR) HSP 1 Score: 62.4 bits (150), Expect = 6.470e-7 Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 1
Query: 574 KKIVVTHENLPRMKNVVILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGSHTNLHSAGKN------GLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNK 888
K+ V+ E+L K+V++ + G++YC + KVA WKR L + G+ GSH + S N L L E+ I L S Y +FV VR+P ERLVSA+ NK
Sbjct: 53 KRRVLIPEDL---KHVIVDDQHGLLYCYVPKVACTNWKRVLMVLTGVA---GSHQDPLSIPANEAHVPGNLRTLSEYSTSQINQRLRS--YLKFVFVREPFERLVSAYRNK 155
BLAST of mRNA_Ecto-sp13_S_contig681.17752.1 vs. uniprot
Match: UPI00106DB351 (carbohydrate sulfotransferase 11-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106DB351) HSP 1 Score: 62.0 bits (149), Expect = 7.700e-7 Identity = 37/102 (36.27%), Postives = 55/102 (53.92%), Query Frame = 1
Query: 601 LPR--MKNVVILREEGIIYCPIAKVASAEWKRSLRWMVGI--EDWMGSHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCV 894
LPR +V++ E +YC I KVAS+ WKR L + G W ++H+ ++ L E+ I L++ Y++F+ VRDP ERL SA+ NK V
Sbjct: 65 LPRHIFSHVIVDDENRFLYCEIPKVASSNWKRVLMTLSGHTRSPWNVKTRDIHNKSRSYFRYLNEYSASEIVVRLKT--YYKFLFVRDPFERLASAYRNKFV 164
BLAST of mRNA_Ecto-sp13_S_contig681.17752.1 vs. uniprot
Match: A0A812Q513_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812Q513_9DINO) HSP 1 Score: 62.0 bits (149), Expect = 7.760e-7 Identity = 52/190 (27.37%), Postives = 84/190 (44.21%), Query Frame = 1
Query: 622 VILREEGIIYCPIAKVASAEWKRSLRWMVGIEDWMGSHTNLHSAGKNG--LERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTLFPNATEATLDTHQRLRDLVEREPEDTFYRFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVI 1185
+++ + +I+CP KV + E+ R L+W+ G + HS +N L L+E+G E + + + VVVRDP +RL SA+ +K + R+ AP T F A + Q L++L +F F + A+MKR KV+N H+ Q C LR + +
Sbjct: 70 IVIPDAKLIFCPQYKVGTREYLRLLQWLDGQDYNRRPQEQTHSVRRNSFNLTELEEFGNEAALRMMFDSDWAKLVVVRDPLDRLRSAYFDK----------IRREKAP---------TKFAKALNVPV---QALKNL-------SFAAFVRRVGAQMKR-----KVANIHWGMQAQACGLRRFKKCYQYV 225 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig681.17752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig681.17752.1 >prot_Ecto-sp13_S_contig681.17752.1 ID=prot_Ecto-sp13_S_contig681.17752.1|Name=mRNA_Ecto-sp13_S_contig681.17752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=535bp MIRQCRKGETMAKYIWIFHANPTRASSALYAGLAILSHRSMAPTPSDVRPback to top mRNA from alignment at Ecto-sp13_S_contig681:7822..18254+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig681.17752.1 ID=mRNA_Ecto-sp13_S_contig681.17752.1|Name=mRNA_Ecto-sp13_S_contig681.17752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10433bp|location=Sequence derived from alignment at Ecto-sp13_S_contig681:7822..18254+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig681:7822..18254+ >mRNA_Ecto-sp13_S_contig681.17752.1 ID=mRNA_Ecto-sp13_S_contig681.17752.1|Name=mRNA_Ecto-sp13_S_contig681.17752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1605bp|location=Sequence derived from alignment at Ecto-sp13_S_contig681:7822..18254+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |