prot_Ecto-sp13_S_contig68.17733.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig68.17733.1
Unique Nameprot_Ecto-sp13_S_contig68.17733.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length728
Homology
BLAST of mRNA_Ecto-sp13_S_contig68.17733.1 vs. uniprot
Match: D8LLG5_ECTSI (DEAD/DEAH box helicase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG5_ECTSI)

HSP 1 Score: 688 bits (1776), Expect = 2.940e-234
Identity = 466/601 (77.54%), Postives = 481/601 (80.03%), Query Frame = 0
Query:  151 MGGDDGLQSAGPPSESRRLELRFPQKNTAGTGKAKRQDGGTSDSGAAAVDWRENRDQRARSGGASNPSAKGKRPRG-----ANGAGREDERPPSAEDGAAEKLRFDPLRALEYLKSLPIYEDQVVYSETLPGRAGEYKDTLRPLHPEVKTALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRERGVVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSYVVIDEGAKKAAVSAGGAGV------------------EGEGGEVSPAAXXXXXXXXXXXXXXXXXXXSRSRGGKGGGGSVSGVPAKEGGVEATGDEESNGDGGRGXSGAASXKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGEASPESAALLEAGIVGDMAAVASAVGDPSSGGSGGDAGTPGSRRRTPGSGAARGXXXXXXXXXXXXXXGGEWEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLQKTAPQMVPLVQGYRGGYTKGERRKIEGSLFANKV 728
            MGG+DGLQSAGPP ESRRLELRFPQKNTA        DGGTSD  AAAV WRENRDQRARSGGA NPSAKGKRPRG     + G G++DE PP AE+GAAEKLRFDPLRALEYLKSLPIYEDQ VYSETLPGR+GEY+DTLRPLHPE+K ALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVI+AIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLS+RVRPMTLDGDTPFRERG VVEEANIILTNPDMLHASVLPGHKKFRRILGNLS+VVIDEGAKKAA                          +GEG +    AXXXXXXXXXXXXXX                    VPAKEGGVE TGD                X  XXXXXXXXXXXXXXXXXXXXX            XXXXX      SPESAALLEAGIVGDMAAVASA+GDPSSGGSGGDAGTPGSR RTPGSGAA  XXXXXXXXXXXXXX  EWEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDL KTAPQMVPLVQGYRGGYTK ERRKIEGSLFANK+
Sbjct:    1 MGGNDGLQSAGPPCESRRLELRFPQKNTA--------DGGTSDRAAAAVGWRENRDQRARSGGALNPSAKGKRPRGEGRAGSEGGGKQDEGPPGAEEGAAEKLRFDPLRALEYLKSLPIYEDQAVYSETLPGRSGEYEDTLRPLHPELKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIDAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSQRVRPMTLDGDTPFRERGAVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSHVVIDEGAKKAAXXXXXXXXXXXXXXXXXXXXXXXXXRQGEGEQAVSDAXXXXXXXXXXXXXX--------------------VPAKEGGVEDTGDXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXKGRTRGSKKRGRXXXXXXXXXXXSPESAALLEAGIVGDMAAVASAIGDPSSGGSGGDAGTPGSRTRTPGSGAAGXXXXXXXXXXXXXXXXXEWEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLGKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKL 562          
BLAST of mRNA_Ecto-sp13_S_contig68.17733.1 vs. uniprot
Match: A0A6H5KP27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP27_9PHAE)

HSP 1 Score: 587 bits (1512), Expect = 7.950e-189
Identity = 438/731 (59.92%), Postives = 452/731 (61.83%), Query Frame = 0
Query:  191 TSDSGAAAVDWRENRDQRARSGGASNPSAKGKRPRGANGAG-----REDERPPSAEDGAAEKLRFDPLRALEYLKSLPIYEDQVVYSETLPGRAGEYKDTLRPLHPEVKTALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRERGVVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSYVVIDE-------------------------------------------------------------------------------------------------GAKK---AAVSAGGAGVEG-----------------------------------------------------------------------EGGEVSPAAXXXXXXXXXXXXXXXXXXXSRSRGG------------KGGGGSVSGVPAKEGGVEATGDEESNGDGGRGXSGAASXKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGEASPESAALLEAGIVGDMAAVASAVGDPSSGGSGGDAGTPGSRRRTPGSGAARGXXXXXXXXXXXXXXGGE-----WEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLQKTAPQMVPLVQGYRGGYTKGERRKIEGSLFANKV 728
            TSDS A A DWREN DQRARSGGA N SAKGKRPRGA G G     +E E PP AEDGAAEKLRFDPLRALEYLKSLPIYEDQ VYSETLPGRAGEY+DT RPLHPEVK ALERSKGV RLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLK LVGASPYLSERVRPMTLDGDTPFRERG VV+EANIILTNPDMLHASVLPGHKKFRRILGNLS+VVIDE                                                                                                 GAKK   +AVSAGGAGV                                                                         EG    P+                                      +G G SVSG+PAKEGGVEATGDE S+G GG        X  XXXXXXXXXXXXXXXXXXXXXXXXXX            GAAGEASPE+AALLEAG+V DMAAVASAVGDPSSGGSGGDAGTPGSR RTPGS     XXXXXXXXXXXXXX        WEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDL+KTAPQ+VPLVQGYRGGYTK ERRKIEGSLFANK+
Sbjct:  217 TSDSAAQAADWRENHDQRARSGGALNRSAKGKRPRGAGGTGSEGGGKEVEGPPGAEDGAAEKLRFDPLRALEYLKSLPIYEDQAVYSETLPGRAGEYEDTKRPLHPEVKAALERSKGVARLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASPYLSERVRPMTLDGDTPFRERGAVVDEANIILTNPDMLHASVLPGHKKFRRILGNLSHVVIDEAHVYRGAFGAHVSMVLRRLLRLWSVNALPGPPPQFICCSATMSSAPSHFASLLPLEECLGGRRNLYLGSVDTAPSSRKTFVLWRPPIVAEWFTSPSEGAKKEAVSAVSAGGAGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLRGLEGWRKGPSDNFYNKEYLKLMGAALPRPSPLPXXXXXXXXXXSPPFVRGTGASVSGIPAKEGGVEATGDEVSSGAGGX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKKRGRREQRAGAAGEASPEAAALLEAGMVVDMAAVASAVGDPSSGGSGGDAGTPGSRTRTPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXWEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQLVPLVQGYRGGYTKDERRKIEGSLFANKL 942          
BLAST of mRNA_Ecto-sp13_S_contig68.17733.1 vs. uniprot
Match: A0A8J9S2L8_9CHLO (Probable ATP-dependent helicase hrq1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S2L8_9CHLO)

HSP 1 Score: 185 bits (469), Expect = 6.650e-45
Identity = 97/188 (51.60%), Postives = 137/188 (72.87%), Query Frame = 0
Query:  256 LEYLKSLPIYEDQVVYSETLPGRAGEYKDTLRPLHPEVKTALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTL-DGDTPFRERGVVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSYVVIDEG 442
            L +L+++  Y+DQ+V++E +P RA +Y +   PL   V+ AL  ++GVT LF HQA AIDAA AG+HV + T+T+SGKS+ +N+ ++EA+V   P A ALY+FPTKALAQDQLR+LKEL  A+    ++   + + DGDTP  +RG V E A++++TNPDMLH S+LP H++F R L NL YVV+DEG
Sbjct:  609 LAHLRTVSWYKDQIVHTEQIPARAAQYSEPAAPLSSPVRAALS-ARGVTHLFTHQAQAIDAARAGKHVVVCTSTASGKSLCYNLPILEALVRD-PQATALYMFPTKALAQDQLRALKELCAAA--FGDKAPCIDIYDGDTPQADRGEVRERAHLLITNPDMLHCSILPVHRQFSRFLANLHYVVVDEG 792          
BLAST of mRNA_Ecto-sp13_S_contig68.17733.1 vs. uniprot
Match: A0A835ZL03_9STRA (DEAD/DEAH box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL03_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.370e-43
Identity = 83/137 (60.58%), Postives = 109/137 (79.56%), Query Frame = 0
Query:  305 RLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRERGVVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSYVVIDE 441
            R +KHQA+ I+A  AG+H+A+STATSSGKSVVF V V++A++   P+AVAL++FPTKALAQDQLRS++ L+ A  +L+  +    LDGDTPF ER  + E A+IILTNPDMLHASVLP HK++ R+LG L +VV+DE
Sbjct:    1 RFYKHQAVGINAVVAGQHLAISTATSSGKSVVFTVPVLQALLTGEPNAVALFVFPTKALAQDQLRSMRALLAADDHLNAAITCGCLDGDTPFAERCNIAETADIILTNPDMLHASVLPAHKRWARLLGRLRFVVLDE 137          
BLAST of mRNA_Ecto-sp13_S_contig68.17733.1 vs. uniprot
Match: A0A5A8CYB9_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYB9_CAFRO)

HSP 1 Score: 178 bits (451), Expect = 4.090e-43
Identity = 98/205 (47.80%), Postives = 142/205 (69.27%), Query Frame = 0
Query:  238 PSAEDGAAEKLRFDPLRALEYLKSL-PIYEDQVVYSETLPGRAGEYKDTLRPLHPEVKTALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRERGVVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSYVVIDE 441
            PS  D +  +L   P+ +     SL P Y DQ+ +  T+  R  +++D  RP+HP ++ A+  ++G+T+ F+HQ+LAIDAA AG+HV +ST+TSSGKS+VF+V V + ++  R  AVA+ +FPTKALAQDQLR+++E    S  L+  VR  TLDGD+   ER      AN+ILTNPDMLHASVLP H +++R+L +L++VV+DE
Sbjct:  193 PSKPDLSMVELTLRPVGSSMQRSSLRPWYVDQLRHVHTILPRPAKFRDVERPVHPAIRMAMH-ARGITKFFEHQSLAIDAALAGKHVVISTSTSSGKSLVFSVPVFDRLLRDRA-AVAILIFPTKALAQDQLRAVREFCRGSATLASAVRAATLDGDSSPAEREAACLGANLILTNPDMLHASVLPRHSQWKRVLSSLAFVVLDE 395          
BLAST of mRNA_Ecto-sp13_S_contig68.17733.1 vs. uniprot
Match: A0A7C7L1I0_9BACT (DEAD/DEAH box helicase (Fragment) n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C7L1I0_9BACT)

HSP 1 Score: 161 bits (408), Expect = 6.210e-42
Identity = 91/186 (48.92%), Postives = 120/186 (64.52%), Query Frame = 0
Query:  256 LEYLKSLPIYEDQVVYSETLPGRAGEYKDTLRPLHPEVKTALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRERGVVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSYVVIDE 441
            L  LKS   Y  Q+ + E LP R   Y +    +H  V+TAL+R+ G+ RL++HQA AI A  AG+HVA+ T  SSGK++ +N+ V+EA++  R +  ALY+FPTKALAQDQLR L+EL      L E +   T DGDTP  ER  V E   +I TNPDMLH ++LP H  +RR L NL +VV+DE
Sbjct:   10 LRELKSQDWYRGQITHIEVLPARGAIYSEPQIAIHHRVRTALQRA-GIQRLYQHQADAIAAIRAGKHVAIITGASSGKTLCYNIPVLEALLTQR-EMRALYIFPTKALAQDQLRKLREL-----GLFEHIIAWTYDGDTPVSERRTVRETCPLIFTNPDMLHLAILPNHHLWRRFLANLRFVVLDE 188          
BLAST of mRNA_Ecto-sp13_S_contig68.17733.1 vs. uniprot
Match: F2TYE6_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TYE6_SALR5)

HSP 1 Score: 175 bits (443), Expect = 9.980e-42
Identity = 98/198 (49.49%), Postives = 132/198 (66.67%), Query Frame = 0
Query:  244 AAEKLRFDPLRALEYLKSLPIYEDQVVYSETLPGRAGEYKDTLRPLHPEVKTALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRERGVVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSYVVIDE 441
            A    +FDP   L++L  LP+ +   ++ ETLP RA  + +  RPL   ++  L    G+ RLF HQA  ++AA  G HV +STATSSGKS+V+++  +EA++    + VALY+FPTKALAQDQLRSL+E VGA  +L + VR   LD DTP R R  V   ANIILTNPD+LHA++LP H+ + RI  +L +VVIDE
Sbjct:  249 ATPPAQFDPKEILDHLLRLPLAKGHSLHVETLPARAPVFGELERPLPSPLQHTLA-DLGIQRLFSHQAEGVNAARDGAHVMISTATSSGKSLVYHLPTMEALLSDPHNTVALYIFPTKALAQDQLRSLREFVGAG-WLGDAVRADCLDADTPARAREDVKSAANIILTNPDLLHATLLPRHRDWHRIFRSLRFVVIDE 444          
BLAST of mRNA_Ecto-sp13_S_contig68.17733.1 vs. uniprot
Match: X1NNF7_9ZZZZ (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1NNF7_9ZZZZ)

HSP 1 Score: 162 bits (409), Expect = 2.720e-41
Identity = 88/186 (47.31%), Postives = 127/186 (68.28%), Query Frame = 0
Query:  256 LEYLKSLPIYEDQVVYSETLPGRAGEYKDTLRPLHPEVKTALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRERGVVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSYVVIDE 441
            L YL +LP Y  Q+V+ E +P +   +    +PLHP +KT LE S G++ L+ HQA A++A  AG++V ++T ++SGK++ ++++ +EAI+G +    A+Y+FPTKALAQDQLRSLKE+  A P L       T DGDTP  ER  + ++A ++LTNPDMLH  VLP H+ + R+L  L YVVIDE
Sbjct:    5 LHYLAALPNYRQQIVHIEHIPAQDAAFGKLDKPLHPVLKTRLE-SLGLSALYSHQAEALNAIFAGKNVIVATPSASGKTLCYHLATLEAILGDKGSR-AVYIFPTKALAQDQLRSLKEI--ACPELLSERAVATFDGDTPQAERANIKKQARVVLTNPDMLHLGVLPHHQSWFRLLRQLKYVVIDE 186          
BLAST of mRNA_Ecto-sp13_S_contig68.17733.1 vs. uniprot
Match: A0A7V2CKQ6_9BACT (DEAD/DEAH box helicase (Fragment) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7V2CKQ6_9BACT)

HSP 1 Score: 164 bits (415), Expect = 3.050e-41
Identity = 89/177 (50.28%), Postives = 117/177 (66.10%), Query Frame = 0
Query:  265 YEDQVVYSETLPGRAGEYKDTLRPLHPEVKTALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRERGVVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSYVVIDE 441
            Y  Q+   E LP R   Y     PLHP ++  L R++G+  L+ HQA AIDA AAGR+V + T T+SGK++ +N+ V+++++   P+A ALYLFPTKALAQDQL +LK L  A   LS  VRP T DGDTP  +R  + E ANI+L+NPDMLH  +LP H ++   L  L YVVIDE
Sbjct:   16 YRGQIAAVEELPARPARYAPPQTPLHPVLRQML-RAEGIEELYLHQARAIDALAAGRNVVVVTGTASGKTMCYNLPVLQSLL-ESPEARALYLFPTKALAQDQLGTLKRLAAADLILSGTVRPATYDGDTPNSQRRRIRESANIVLSNPDMLHQGILPYHGRWATFLARLRYVVIDE 190          
BLAST of mRNA_Ecto-sp13_S_contig68.17733.1 vs. uniprot
Match: A0A497AP77_9CHLR (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497AP77_9CHLR)

HSP 1 Score: 157 bits (398), Expect = 7.860e-41
Identity = 89/186 (47.85%), Postives = 122/186 (65.59%), Query Frame = 0
Query:  256 LEYLKSLPIYEDQVVYSETLPGRAGEYKDTLRPLHPEVKTALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRERGVVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSYVVIDE 441
            LEYLK+ P Y  Q+V+ E +P R   Y +  RPL   ++ AL+R+ G+  L+ HQA AI+A   G +V ++T T+SGK++V+N+ V+EAI+G      A YLFPTKALAQDQLRSL ELV         +R  T DGDTP   R  + ++A+IILTNPDMLH  +LP H+ +   L +L +VV+DE
Sbjct:    8 LEYLKAAPFYRGQIVHVERIPARKARYGELERPLPEPLQQALKRA-GIRGLYTHQADAINAIRRGENVIVATGTASGKTLVYNIPVLEAILGDWRTR-AFYLFPTKALAQDQLRSLGELVNNG---LPSIRYGTYDGDTPQSARSRLRKQASIILTNPDMLHVGILPNHRLWAHFLAHLKFVVVDE 188          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig68.17733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLG5_ECTSI2.940e-23477.54DEAD/DEAH box helicase domain-containing protein n... [more]
A0A6H5KP27_9PHAE7.950e-18959.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J9S2L8_9CHLO6.650e-4551.60Probable ATP-dependent helicase hrq1 n=1 Tax=Cocco... [more]
A0A835ZL03_9STRA1.370e-4360.58DEAD/DEAH box helicase n=1 Tax=Tribonema minus Tax... [more]
A0A5A8CYB9_CAFRO4.090e-4347.80Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A7C7L1I0_9BACT6.210e-4248.92DEAD/DEAH box helicase (Fragment) n=1 Tax=Armatimo... [more]
F2TYE6_SALR59.980e-4249.49Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
X1NNF7_9ZZZZ2.720e-4147.31Helicase ATP-binding domain-containing protein (Fr... [more]
A0A7V2CKQ6_9BACT3.050e-4150.28DEAD/DEAH box helicase (Fragment) n=1 Tax=Phycisph... [more]
A0A497AP77_9CHLR7.860e-4147.85Helicase ATP-binding domain-containing protein (Fr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 302..569
e-value: 2.9E-6
score: 36.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 314..442
score: 11.201
NoneNo IPR availableGENE3D3.40.50.300coord: 266..443
e-value: 2.2E-24
score: 87.9
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 652..726
coord: 272..441
NoneNo IPR availablePANTHERPTHR24031:SF643coord: 652..726
coord: 272..441
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 532..553
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..531
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 554..728
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 308..441
e-value: 9.4E-16
score: 58.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 288..441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig68contigEcto-sp13_S_contig68:690..10075 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig68.17733.1mRNA_Ecto-sp13_S_contig68.17733.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig68 690..10075 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig68.17733.1 ID=prot_Ecto-sp13_S_contig68.17733.1|Name=mRNA_Ecto-sp13_S_contig68.17733.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=728bp
RGASTTALLSCDMSDKATVGDVNGGRGSSATTGGKKRASKKRSSSKAAAA
GGGRRRGNNKDQAEAGATSLSEAYNQLLDLFTAVDHAYCFLINNSIPPRV
ASLQSLVWRLFPGRFGDEASFLPRLRELAGVARAVLVLEEPPESGGDVDT
MGGDDGLQSAGPPSESRRLELRFPQKNTAGTGKAKRQDGGTSDSGAAAVD
WRENRDQRARSGGASNPSAKGKRPRGANGAGREDERPPSAEDGAAEKLRF
DPLRALEYLKSLPIYEDQVVYSETLPGRAGEYKDTLRPLHPEVKTALERS
KGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRP
DAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRERG
VVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSYVVIDEGAKKAAVSA
GGAGVEGEGGEVSPAAAAIGGGREGEGEHAVSDAASRSRGGKGGGGSVSG
VPAKEGGVEATGDEESNGDGGRGGSGAASGKAAGAAAAAAAAAAAAAAAA
ATAKGRTRGSKRRGRREQRAGAAGEASPESAALLEAGIVGDMAAVASAVG
DPSSGGSGGDAGTPGSRRRTPGSGAARGEGEGGGEGGGEGGGGGEWEDGR
RRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLQKTAPQM
VPLVQGYRGGYTKGERRKIEGSLFANKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase