prot_Ecto-sp13_S_contig67976.17729.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig67976.17729.1
Unique Nameprot_Ecto-sp13_S_contig67976.17729.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length123
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig67976.17729.1 vs. uniprot
Match: UPI0014240E84 (hypothetical protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI0014240E84)

HSP 1 Score: 250 bits (638), Expect = 3.870e-83
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0 
Query:    1 FKQPYPNGPLVGAPMSGYCGSNQGGGVAKSVVIAVKNNGNETAGHFMVKVDFLDYPGTSARAYGPINPGPSADLDSFVIPQQAWKNGVARFTVEIDSNKEIDEGLSGEANNYMEGYCVAPAG 122
            FKQPYPNGPLVGAPMSGYCGSNQGGGVAKSVVIAVKNNGNETAGHFMVKVDFLDYPGTSARAYGPINPGPSADLDSFVIPQQAWKNG+ARFTVEIDS  E+DEGLSGEANNYMEGYCVAPAG
Sbjct:   71 FKQPYPNGPLVGAPMSGYCGSNQGGGVAKSVVIAVKNNGNETAGHFMVKVDFLDYPGTSARAYGPINPGPSADLDSFVIPQQAWKNGMARFTVEIDSQNEVDEGLSGEANNYMEGYCVAPAG 192
[Close]
BLAST of mRNA_Ecto-sp13_S_contig67976.17729.1 vs. uniprot
Match: A0A812M342_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812M342_SYMMI)

HSP 1 Score: 127 bits (320), Expect = 3.130e-32
Identity = 65/120 (54.17%), Postives = 81/120 (67.50%), Query Frame = 0 
Query:    3 QPYPNGPLVGAPMSGYCGSNQGGGVAKSVVIAVKNNGNETAGHFMVKVDFLDYPGTSARAYGPINPGPSADLDSFVIPQQAWKNGVARFTVEIDSNKEIDEG-LSGEANNYMEGYCVAPA 121
            QPYP+G L GAP SG+CG N GGG AKSV+I V+N+G+  AG F VKV F     T   +YGP+ PGP+    SF IP  AW +GVA F ++IDS  E++EG   GE NN++ GYCVA A
Sbjct:   72 QPYPSGVLEGAPSSGHCGPNNGGGAAKSVLIRVRNDGSAEAGVFRVKVVFTVSGKTFETSYGPMAPGPATWWTSFPIPADAWSSGVAPFQLQIDSKDEVEEGGARGERNNFLSGYCVARA 191
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67976.17729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI0014240E843.870e-8396.72hypothetical protein n=1 Tax=Pelagibius litoralis ... [more]
A0A812M342_SYMMI3.130e-3254.17Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 20..118
e-value: 2.1E-6
score: 29.7
IPR011635CARDB domainPFAMPF07705CARDBcoord: 29..113
e-value: 1.8E-6
score: 28.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig67976contigEcto-sp13_S_contig67976:241..609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig67976.17729.1mRNA_Ecto-sp13_S_contig67976.17729.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig67976 241..609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig67976.17729.1 ID=prot_Ecto-sp13_S_contig67976.17729.1|Name=mRNA_Ecto-sp13_S_contig67976.17729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp
FKQPYPNGPLVGAPMSGYCGSNQGGGVAKSVVIAVKNNGNETAGHFMVKV
DFLDYPGTSARAYGPINPGPSADLDSFVIPQQAWKNGVARFTVEIDSNKE
IDEGLSGEANNYMEGYCVAPAG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR011635CARDB