prot_Ecto-sp13_S_contig6793.17726.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6793.17726.1
Unique Nameprot_Ecto-sp13_S_contig6793.17726.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length66
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6793.17726.1 vs. uniprot
Match: A0A6H5KGA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA0_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 3.420e-40
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 
Query:    1 MRHHYGGDGSSGLTTGGGFKFFCMYAFLDKFVEQCPQVDRSVLEEFIPYALMHAGYLDMSRSALI 65
            MRHHYGGDGSSGLT GGGFKFFCMYAFLDKFVEQCPQVDRSVLEEFIPYALMHAGYLDMSRSALI
Sbjct:   94 MRHHYGGDGSSGLTPGGGFKFFCMYAFLDKFVEQCPQVDRSVLEEFIPYALMHAGYLDMSRSALI 158
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BLAST of mRNA_Ecto-sp13_S_contig6793.17726.1 vs. uniprot
Match: D8LMP7_ECTSI (Component of SCAR regulatory complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP7_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 2.820e-36
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 
Query:    1 MRHHYGGDGSSGLTTGGGFKFFCMYAFLDKFVEQCPQVDRSVLEEFIPYALMHAGYLDMSRSALI 65
            MRHHYGGDGSSGLT GGGFKFFCMYAFLDKFVEQCPQVDRSVLEEFIPYALMHAGYLDMSRSALI
Sbjct:  891 MRHHYGGDGSSGLTPGGGFKFFCMYAFLDKFVEQCPQVDRSVLEEFIPYALMHAGYLDMSRSALI 955
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BLAST of mRNA_Ecto-sp13_S_contig6793.17726.1 vs. uniprot
Match: A0A7R9U2E3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2E3_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.220e-6
Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 0 
Query:   14 TTGGGFKFFCMYAFLDKFVEQCPQVDRSVLEEFIPYALMHAGYLDMS 60
            TT   F    M   L+KFVE+CP + RS+LE+F+PYA++H  Y+D+S
Sbjct:  796 TTFAAFPLRAMTLLLEKFVEECPFLKRSMLEKFMPYAILHNAYMDVS 842
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6793.17726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KGA0_9PHAE3.420e-4098.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMP7_ECTSI2.820e-3698.46Component of SCAR regulatory complex n=1 Tax=Ectoc... [more]
A0A7R9U2E3_9STRA1.220e-648.94Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019137Nck-associated protein 1PFAMPF09735Nckap1coord: 24..59
e-value: 5.1E-6
score: 24.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6793contigEcto-sp13_S_contig6793:5450..6505 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6793.17726.1mRNA_Ecto-sp13_S_contig6793.17726.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6793 4535..7363 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6793.17726.1 ID=prot_Ecto-sp13_S_contig6793.17726.1|Name=mRNA_Ecto-sp13_S_contig6793.17726.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=66bp
MRHHYGGDGSSGLTTGGGFKFFCMYAFLDKFVEQCPQVDRSVLEEFIPYA
LMHAGYLDMSRSALI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019137Nck-associated_protein-1