prot_Ecto-sp13_S_contig6792.17724.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6792.17724.1
Unique Nameprot_Ecto-sp13_S_contig6792.17724.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length165
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6792.17724.1 vs. uniprot
Match: A0A6H5KZI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI4_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 5.870e-81
Identity = 143/164 (87.20%), Postives = 147/164 (89.63%), Query Frame = 0 
Query:    1 QVLDAAAKAGWEKIRFSALRMGKIAAGAAVAGRWETHGRPLVLRMGLLGVSERDVSSWTAVLLPLSRLGCADECLEVLEIMEGAVGLTTATATATPGVHHSGRRNGSAAPAGGEKHALGAAPLDGEGRRPGERSMDFFHDLDRRDELLTVAHNHCMFAFIKAGR 164
            +VLDAAAKAGWEKIRFSALRMGK++ GAAVAGRWETHGRPLVLRMG LGVSE DVSSWTAVLLPLSRLGCADECLEVLEIMEGAVGLTTA ATATPGV  SGRRNGSAAP GGEKHALGAA LDG         MDFFHDLDRR+ELLTVAHNHCMFAFIKAGR
Sbjct:  336 KVLDAAAKAGWEKIRFSALRMGKVS-GAAVAGRWETHGRPLVLRMGSLGVSEGDVSSWTAVLLPLSRLGCADECLEVLEIMEGAVGLTTAAATATPGVPRSGRRNGSAAPTGGEKHALGAALLDG---------MDFFHDLDRRNELLTVAHNHCMFAFIKAGR 489
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BLAST of mRNA_Ecto-sp13_S_contig6792.17724.1 vs. uniprot
Match: D7G9B5_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B5_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 3.670e-80
Identity = 140/164 (85.37%), Postives = 143/164 (87.20%), Query Frame = 0 
Query:    1 QVLDAAAKAGWEKIRFSALRMGKIAAGAAVAGRWETHGRPLVLRMGLLGVSERDVSSWTAVLLPLSRLGCADECLEVLEIMEGAVGLTTATATATPGVHHSGRRNGSAAPAGGEKHALGAAPLDGEGRRPGERSMDFFHDLDRRDELLTVAHNHCMFAFIKAGR 164
            +VLDAAAKAGWEKIRFSALRMGK+AAGAAVAGRWETHGRPLVLRMG LGV E DVSSWTAVLLPLSRLGCADECLEVLEIMEGAVGLTTATA ATPGV HSG RNGSAAP G EKHALG AP         E  MDFFH LDRR+ELLTVAHNHCMFAFIKAGR
Sbjct:  456 KVLDAAAKAGWEKIRFSALRMGKVAAGAAVAGRWETHGRPLVLRMGSLGVPEGDVSSWTAVLLPLSRLGCADECLEVLEIMEGAVGLTTATAAATPGVPHSGGRNGSAAPTGEEKHALGVAPR--------EHGMDFFHGLDRRNELLTVAHNHCMFAFIKAGR 611
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6792.17724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZI4_9PHAE5.870e-8187.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9B5_ECTSI3.670e-8085.37PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6792contigEcto-sp13_S_contig6792:1103..3745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6792.17724.1mRNA_Ecto-sp13_S_contig6792.17724.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6792 1103..3745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6792.17724.1 ID=prot_Ecto-sp13_S_contig6792.17724.1|Name=mRNA_Ecto-sp13_S_contig6792.17724.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=165bp
QVLDAAAKAGWEKIRFSALRMGKIAAGAAVAGRWETHGRPLVLRMGLLGV
SERDVSSWTAVLLPLSRLGCADECLEVLEIMEGAVGLTTATATATPGVHH
SGRRNGSAAPAGGEKHALGAAPLDGEGRRPGERSMDFFHDLDRRDELLTV
AHNHCMFAFIKAGR*
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