prot_Ecto-sp13_S_contig6790.17723.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6790.17723.1
Unique Nameprot_Ecto-sp13_S_contig6790.17723.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length419
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6790.17723.1 vs. uniprot
Match: D7FM23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM23_ECTSI)

HSP 1 Score: 414 bits (1063), Expect = 1.540e-141
Identity = 217/275 (78.91%), Postives = 219/275 (79.64%), Query Frame = 0 
Query:    1 MSSTMLPSAEWISASSRRRAATALAQDRSISSGGRCPPGARHPTSIPPQPGSNDDDAHREEGFVGHRGSGGLVHGRAVFCLPPGVEWFQGHFAYAARGGCTASLGVLGTELPVDPCMQCCHGGFSRYKLVFIHHE-----------------SGKESALVVERYGGNMMTLNAESSAVMGGGDGPVPPESELSFTTHVMKADDNARTLLGRYFQSIVRASSDPS-----------------ELQDCIVCIGAMDVPLSLLQELAAPLPDSRTQSM 241
            MSST+LPSAEWISASSRR                  PPGA HPT IPPQPGSNDDDAHREE FVGHRGSGGLVHGRAVFCLPPGVEWFQGHFAYAARGGCTASLGVLGTELPVDPCMQCCHGGFSRYKLVFIHHE                 SGKESALVVERYGGNMMTLNAE SAVMGGGDGPVPPESELSFTTHVMKADD+ARTLLGRYFQSIVRASSDPS                 ELQDCIVCIGAMDVPLSLLQELAAPLPDSRTQSM
Sbjct:    1 MSSTLLPSAEWISASSRRXXXXXXXXXXXXXXXXXXPPGAGHPTGIPPQPGSNDDDAHREERFVGHRGSGGLVHGRAVFCLPPGVEWFQGHFAYAARGGCTASLGVLGTELPVDPCMQCCHGGFSRYKLVFIHHEVKCGKRSDATLAFDGYMSGKESALVVERYGGNMMTLNAEPSAVMGGGDGPVPPESELSFTTHVMKADDDARTLLGRYFQSIVRASSDPSPQAYSRYCRVTSSRVSKELQDCIVCIGAMDVPLSLLQELAAPLPDSRTQSM 275
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BLAST of mRNA_Ecto-sp13_S_contig6790.17723.1 vs. uniprot
Match: A0A836CLT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT4_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.310e-27
Identity = 64/167 (38.32%), Postives = 97/167 (58.08%), Query Frame = 0 
Query:   72 LVHGRAVFCLPPGVEWFQGHFAYAARGGCTAS---LGVLGTELPVDPCMQCCHGGFSRYKLVFIHHESGKESALVVERYGGNMMTLNAESSAVMGGGDGPVPPESELSFTTHV--MKADDNARTLLGRYFQSIVRASSDPSE--LQDCIVCIGAMDVPLSLLQELAA 231
            +V GR ++CL P   WFQGHF +   GGC  S   +G+L T+L +DPCM CC+ GF RY L  I+ ++ K++++VVE+ G + M L  E++     GD P P E+  +   H   +K     + L+ R+F SI+ A +D  +  L DC +C+G M V   LL ++ A
Sbjct:   90 MVEGRGIWCLLPHSAWFQGHFVFRG-GGCGTSDKAIGLLATQLDMDPCMMCCYQGFGRYDLALINRKTSKQTSVVVEKSGDHCMALRTETA-----GD-PTPDEARRAIAFHAEDVKVASTKKELMQRFFPSILAAIADSGDDVLDDCSLCLGPMSVSSHLLLKVGA 249
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6790.17723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM23_ECTSI1.540e-14178.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CLT4_9STRA2.310e-2738.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 14..386
NoneNo IPR availablePANTHERPTHR23202:SF27VERPROLIN 1, ISOFORM Gcoord: 14..386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6790contigEcto-sp13_S_contig6790:1767..6860 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6790.17723.1mRNA_Ecto-sp13_S_contig6790.17723.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6790 1673..7439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6790.17723.1 ID=prot_Ecto-sp13_S_contig6790.17723.1|Name=mRNA_Ecto-sp13_S_contig6790.17723.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=419bp
MSSTMLPSAEWISASSRRRAATALAQDRSISSGGRCPPGARHPTSIPPQP
GSNDDDAHREEGFVGHRGSGGLVHGRAVFCLPPGVEWFQGHFAYAARGGC
TASLGVLGTELPVDPCMQCCHGGFSRYKLVFIHHESGKESALVVERYGGN
MMTLNAESSAVMGGGDGPVPPESELSFTTHVMKADDNARTLLGRYFQSIV
RASSDPSELQDCIVCIGAMDVPLSLLQELAAPLPDSRTQSMVCSAFAPCR
ETPQQDQPPPQQQQEQQQQQQQQRHQGHPLSGQHRRRRQTVERNKHTPVL
SPYPSGREEQAHRQAAPPPPAPPLQAQAPSRDTAAPSPPATCCTSGGGVI
EEGNAASRSGEGNGGASSSAVGGGGRTIFEDETDRCASERKSHVEAAAAG
AGATRNQAEKEDDDWLEG*
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