prot_Ecto-sp13_S_contig679.17722.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig679.17722.1
Unique Nameprot_Ecto-sp13_S_contig679.17722.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
BLAST of mRNA_Ecto-sp13_S_contig679.17722.1 vs. uniprot
Match: D7G572_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G572_ECTSI)

HSP 1 Score: 417 bits (1072), Expect = 9.120e-146
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
Query:    1 MMKQMPAQRERRKKDFERVLTLFASDSLAKDRRNKVFEYFDKAVTKANCFQVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQHFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGGGNDYFG 209
            MMKQMPAQRERRKKDFERVLTLFASDSLAKDRRNKVFEYFDKAVTKANCFQVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQHFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGGGNDYFG
Sbjct:  112 MMKQMPAQRERRKKDFERVLTLFASDSLAKDRRNKVFEYFDKAVTKANCFQVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQHFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGGGNDYFG 320          
BLAST of mRNA_Ecto-sp13_S_contig679.17722.1 vs. uniprot
Match: A0A835YMR0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR0_9STRA)

HSP 1 Score: 263 bits (672), Expect = 6.380e-86
Identity = 125/209 (59.81%), Postives = 163/209 (77.99%), Query Frame = 0
Query:    2 MKQMPAQRERRKKDFERVLTLFASDSLAKDRRNKVFEYFDKAVTKANCFQVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQHFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGG-GNDYFG 209
            MK  P  RE R++D+ R +TLFA    A+DRRNKVF +F+  V++ N FQ  EV+ VS+++LSVLDE+RE LEL+ NWCDLCLPANE AFAEAHR+K+Q FQDYLS G++ +V+   ++N+QL+KRAQTL+ LF+TKDVLPEN+ GW R HR++LVH E NAYL  A  WEK+LEDY+LYYNY+K N+KD  + F ++GK   G+DYFG
Sbjct:   45 MKTFPTLRECRRQDYNRCITLFALADHARDRRNKVFAFFNSHVSQPNSFQTDEVFRVSEEVLSVLDESREQLELVTNWCDLCLPANETAFAEAHRLKLQDFQDYLSGGVTGIVNSINEVNSQLEKRAQTLQLLFTTKDVLPENRTGWIRAHRDLLVHSETNAYLQVAKIWEKVLEDYVLYYNYWKTNIKDGDLAFGNQGKSERGSDYFG 253          
BLAST of mRNA_Ecto-sp13_S_contig679.17722.1 vs. uniprot
Match: A0A836C7X8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X8_9STRA)

HSP 1 Score: 250 bits (638), Expect = 6.900e-81
Identity = 119/209 (56.94%), Postives = 161/209 (77.03%), Query Frame = 0
Query:    2 MKQMPAQRERRKKDFERVLTLFASDSLAKDRRNKVFEYFDKAVTKANCFQVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQHFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGG-GNDYFG 209
            M+++P  R+  ++D+ + +TLF++D  AKDRR KVF +FD  +T+A  +Q  +V+ +S+++LSVLDE RE LELL+NWCDLCLPANE AFAEA RIKIQ FQ+YLS G++ + + T ++N QL+KRA+TL+ LF+TKDVLPEN+ GW + HR++LVH E NAYL  A  WEK+LEDY+LY+NY+K NLKD  + F   GKG  G DYFG
Sbjct:   36 MQELPKLRDACEQDYTKCVTLFSTDDSAKDRRTKVFAFFDANITEATSYQTDQVFKLSEEVLSVLDECRELLELLMNWCDLCLPANETAFAEALRIKIQDFQEYLSGGVTGLANSTNEVNLQLEKRARTLQLLFTTKDVLPENRAGWIKAHRDLLVHCETNAYLRMAKIWEKVLEDYVLYFNYWKTNLKDGDLAFAHMGKGERGGDYFG 244          
BLAST of mRNA_Ecto-sp13_S_contig679.17722.1 vs. uniprot
Match: A0A836CFQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFQ5_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.110e-58
Identity = 95/200 (47.50%), Postives = 129/200 (64.50%), Query Frame = 0
Query:    9 RERRKKDFERVLTLFASDSLAKDRRNKVFEYFDKAVTKANCFQVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQHFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGGGNDYF 208
            R+ RK++  +V  L +    A++RR KVFE+F   +++ N FQ   VY V+ ++L  +DE RE L+ L +WCDLCLPANEQ+FAE+HR+KIQ FQ  +   +    S    +N  L +R +TLR LF+TK+V   N EGW + H E+L   E NAYL    SWE+LLE YLL YNY+ +NLK  +IVF   G+  GNDYF
Sbjct:   60 RQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGNDYF 259          
BLAST of mRNA_Ecto-sp13_S_contig679.17722.1 vs. uniprot
Match: D8LE75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE75_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 4.270e-52
Identity = 96/207 (46.38%), Postives = 127/207 (61.35%), Query Frame = 0
Query:    2 MKQMPAQRERRKKDFERVLTLFASDSLAKDRRNKVFEYFDKAVTKANCFQVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQHFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGGGNDYF 208
            M + P  R++RK D+ RV  L      A++RR KVFEYF+ A+++ N FQ  E+Y VS++LL ++DE RE L+ L +WCDLCLP N+QAFAE+HR KIQ FQ         +V E         KR+ + RS    ++V   N E W + H ++L   E NAYL    SWE++LE  LL YNY+K+NLKD  IVF   GK  GNDYF
Sbjct:   23 MAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQ-------VQIVQEM--------KRSNSARS----QEVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKSTGNDYF 210          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig679.17722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G572_ECTSI9.120e-146100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YMR0_9STRA6.380e-8659.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7X8_9STRA6.900e-8156.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CFQ5_9STRA2.110e-5847.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LE75_ECTSI4.270e-5246.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..209
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig679contigEcto-sp13_S_contig679:18719..21779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig679.17722.1mRNA_Ecto-sp13_S_contig679.17722.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig679 18719..21806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig679.17722.1 ID=prot_Ecto-sp13_S_contig679.17722.1|Name=mRNA_Ecto-sp13_S_contig679.17722.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MMKQMPAQRERRKKDFERVLTLFASDSLAKDRRNKVFEYFDKAVTKANCF
QVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQ
HFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYR
LHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEG
KGGGNDYFG*
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