prot_Ecto-sp13_S_contig679.17718.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig679.17718.1
Unique Nameprot_Ecto-sp13_S_contig679.17718.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length120
Homology
BLAST of mRNA_Ecto-sp13_S_contig679.17718.1 vs. uniprot
Match: A0A6H5KF19_9PHAE (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF19_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 1.270e-78
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
Query:    1 MGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 119
            MGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH
Sbjct:   74 MGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 192          
BLAST of mRNA_Ecto-sp13_S_contig679.17718.1 vs. uniprot
Match: A0A836C710_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C710_9STRA)

HSP 1 Score: 176 bits (446), Expect = 7.010e-54
Identity = 87/119 (73.11%), Postives = 98/119 (82.35%), Query Frame = 0
Query:    1 MGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 119
            MG +FG+FLGAMGDMQP+Q+INGREVPQAP  EQAR AY  T  RSL M +NFASFSAIFM SECVIEKMRGK DMMNSVY GC TG AFG+K GP+ A  GC+GMA FSA++D +MGH
Sbjct:   81 MGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 199          
BLAST of mRNA_Ecto-sp13_S_contig679.17718.1 vs. uniprot
Match: A0A7S2P255_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P255_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.670e-36
Identity = 65/120 (54.17%), Postives = 84/120 (70.00%), Query Frame = 0
Query:    1 MGFVFGLFLGAMGDMQP-LQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 119
            MG + G+FLGAM DM P + +ING+EVPQAP +EQAR   + T ++ +   RNFA  + +F GSEC++EK RGK D+ N V +GC TGAA   KQGPQAA  GC G A FS ++D +MGH
Sbjct:  101 MGLLMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQARTVMRATGEKCVYWSRNFAFITGVFAGSECLVEKARGKHDVWNQVLSGCVTGAAIQAKQGPQAAALGCGGFAAFSLVIDAVMGH 220          
BLAST of mRNA_Ecto-sp13_S_contig679.17718.1 vs. uniprot
Match: A0A7S1TYW7_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYW7_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.210e-35
Identity = 63/120 (52.50%), Postives = 80/120 (66.67%), Query Frame = 0
Query:    1 MGFVFGLFLGAMGDMQP-LQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 119
            MG V G+FLGAMGD+ P +  + G+E PQ P  EQAR AY+ TA+RS+   R+F + +A+F G+ECVIEK RG+ D  N V +GCA GA      GP AAC GC G A FSA  + +MGH
Sbjct:   72 MGLVLGVFLGAMGDLNPPIYFVKGKEAPQPPLAEQARTAYRTTAERSIGFARSFFALTALFSGTECVIEKFRGRHDGWNPVLSGCAAGAMMSASGGPTAACMGCAGFAAFSAAAEAVMGH 191          
BLAST of mRNA_Ecto-sp13_S_contig679.17718.1 vs. uniprot
Match: A0A7S3VGZ9_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGZ9_9STRA)

HSP 1 Score: 129 bits (325), Expect = 4.180e-35
Identity = 65/118 (55.08%), Postives = 83/118 (70.34%), Query Frame = 0
Query:    2 GFVFGLFLGAMGDMQP-LQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMG 118
            G V G+FLGAM DM P + +ING+EVPQAP REQ R   + T ++SL   RNFA  + +F G++C++EK RG  D+ NSV +GC TGAA   KQGPQAA  GC G A FS ++DK+MG
Sbjct:  118 GLVMGVFLGAMSDMTPPVTIINGKEVPQAPLREQMRTTLRATGEKSLYWARNFAFITGVFGGTDCLVEKYRGTHDVWNSVISGCVTGAAMQAKQGPQAAAIGCGGFAAFSLVIDKVMG 235          
BLAST of mRNA_Ecto-sp13_S_contig679.17718.1 vs. uniprot
Match: A0A448Z601_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z601_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.400e-34
Identity = 64/120 (53.33%), Postives = 85/120 (70.83%), Query Frame = 0
Query:    1 MGFVFGLFLGAMGDMQP-LQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 119
            MG + G+FLGA+ D QP +Q+  G++VPQAPF+EQAR   + TA++S+   RNFA  + +F GSEC++EK RGK DM N V +GC TGAA     GPQAA  GC G A FS ++DK+MG+
Sbjct:  151 MGLLMGVFLGALSDSQPPIQVAGGKDVPQAPFKEQARYTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAHAGPQAAAVGCGGFAAFSIVIDKIMGN 270          
BLAST of mRNA_Ecto-sp13_S_contig679.17718.1 vs. uniprot
Match: A0A1E7EXB6_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EXB6_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.180e-34
Identity = 62/118 (52.54%), Postives = 80/118 (67.80%), Query Frame = 0
Query:    1 MGFVFGLFLGAMGDMQP-LQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLM 117
            MG + G+FLGA+ D  P +Q + GR+VPQAPF+EQ R   + TA++S+   RNFA  + +F GSEC++EK RGK DM N V +GC TGAA   K GPQAA  GC G A FS ++D  M
Sbjct:   17 MGLLMGVFLGALSDSSPPIQAVGGRDVPQAPFKEQVRFTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAKAGPQAAAVGCGGFAAFSIVIDSFM 134          
BLAST of mRNA_Ecto-sp13_S_contig679.17718.1 vs. uniprot
Match: B7FQ85_PHATC (Mitochondrial import inner membrane translocase subunit TIM22 (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ85_PHATC)

HSP 1 Score: 124 bits (312), Expect = 2.320e-34
Identity = 65/118 (55.08%), Postives = 81/118 (68.64%), Query Frame = 0
Query:    1 MGFVFGLFLGAMGDMQP-LQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLM 117
            MG + G+FLGAM D  P +Q+I GREVPQAP REQ ++  + T D+SL   RNFA  + +F GSEC++EK RGK D+ NSV +GC TGAA   K GPQAA  GC G A FS ++D  M
Sbjct:   19 MGLLMGVFLGAMSDATPPVQVIAGREVPQAPLREQIKVTMRATGDKSLYWCRNFAFITGVFGGSECLVEKYRGKHDVWNSVASGCITGAALQAKSGPQAAAVGCGGFAAFSLVIDTFM 136          
BLAST of mRNA_Ecto-sp13_S_contig679.17718.1 vs. uniprot
Match: A0A6U3RYY1_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RYY1_9STRA)

HSP 1 Score: 127 bits (318), Expect = 9.590e-34
Identity = 63/119 (52.94%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MGFVFGLFLGAMGDMQP-LQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMG 118
            MG + G+FLGAM DM P + +I G+EVPQAP +EQ R   + TA++S+   R FA  + +F GSEC++EK RGKTD+ NSV +GC TGAA   K GP +A FGC G A FS ++D +MG
Sbjct:  145 MGLLMGVFLGAMSDMTPPVTVIGGKEVPQAPLKEQMRTTMRATAEKSMYWCRQFAFITGVFSGSECLVEKYRGKTDVWNSVLSGCVTGAAMQAKAGPSSAAFGCGGFAAFSLVIDSVMG 263          
BLAST of mRNA_Ecto-sp13_S_contig679.17718.1 vs. uniprot
Match: K0TBX0_THAOC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBX0_THAOC)

HSP 1 Score: 125 bits (314), Expect = 2.350e-33
Identity = 65/119 (54.62%), Postives = 82/119 (68.91%), Query Frame = 0
Query:    1 MGFVFGLFLGAMGDMQP-LQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMG 118
            MG V G+FLGA+ DM P + +I G+EVPQAP +EQ R   + TAD+SL   R FA  + +F GSEC++EK RGK D+ NSV +GC TGAA   KQGPQA+  GC G A FS ++D  MG
Sbjct:  125 MGLVMGVFLGALTDMTPPVTIIEGKEVPQAPLKEQMRTTLRATADKSLYWCRQFAFITGVFGGSECLVEKYRGKHDVWNSVVSGCITGAAMQAKQGPQASAAGCGGFAVFSLVIDSFMG 243          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig679.17718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF19_9PHAE1.270e-78100.00Mitochondrial import inner membrane translocase su... [more]
A0A836C710_9STRA7.010e-5473.11Mitochondrial import inner membrane translocase su... [more]
A0A7S2P255_9STRA1.670e-3654.17Mitochondrial import inner membrane translocase su... [more]
A0A7S1TYW7_9STRA1.210e-3552.50Mitochondrial import inner membrane translocase su... [more]
A0A7S3VGZ9_9STRA4.180e-3555.08Mitochondrial import inner membrane translocase su... [more]
A0A448Z601_9STRA1.400e-3453.33Mitochondrial import inner membrane translocase su... [more]
A0A1E7EXB6_9STRA2.180e-3452.54Mitochondrial import inner membrane translocase su... [more]
B7FQ85_PHATC2.320e-3455.08Mitochondrial import inner membrane translocase su... [more]
A0A6U3RYY1_9STRA9.590e-3452.94Mitochondrial import inner membrane translocase su... [more]
K0TBX0_THAOC2.350e-3354.62Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 1..110
e-value: 7.4E-27
score: 93.9
NoneNo IPR availablePANTHERPTHR14110:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 1..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
IPR039175Mitochondrial import inner membrane translocase subunit TIM22PANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 1..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig679contigEcto-sp13_S_contig679:2345..3517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig679.17718.1mRNA_Ecto-sp13_S_contig679.17718.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig679 2336..3517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig679.17718.1 ID=prot_Ecto-sp13_S_contig679.17718.1|Name=mRNA_Ecto-sp13_S_contig679.17718.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=120bp
MGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMG
RNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAAC
FGCVGMATFSALMDKLMGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039175TIM22