prot_Ecto-sp13_S_contig6786.17715.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6786.17715.1
Unique Nameprot_Ecto-sp13_S_contig6786.17715.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6786.17715.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 4.950e-81
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = 0 
Query:    1 MRLFFKYHGVYHRVPDTAECFPWEAGSTSVLEAGFDDIIGEAGSVHVSRTGDETATSAYGYTYGIDFAGTAVRGDMDLRLLIAQETLDGEDYASDVSAVVFDGLGESSNIEVTLNDDLDNAGFADAIIGLTYTGLDVNSSHTYSY 145
            MRLFFKYHGVYHRVPDTAECFPWEAGSTSVLEAGFDDIIGEAGSV VSR GDETATSAYGYTYGIDFAGTAVRGDMDLRLLIAQETLDGE  AS VSAV+FDGLGESS+IEVTLNDDLDNAGFADAIIGLTYTGLDVNSSHTYSY
Sbjct: 14868 MRLFFKYHGVYHRVPDTAECFPWEAGSTSVLEAGFDDIIGEAGSVLVSRIGDETATSAYGYTYGIDFAGTAVRGDMDLRLLIAQETLDGE--ASGVSAVIFDGLGESSSIEVTLNDDLDNAGFADAIIGLTYTGLDVNSSHTYSY 15010
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BLAST of mRNA_Ecto-sp13_S_contig6786.17715.1 vs. uniprot
Match: A0A6H5JYH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH1_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 4.710e-76
Identity = 132/145 (91.03%), Postives = 135/145 (93.10%), Query Frame = 0 
Query:    1 MRLFFKYHGVYHRVPDTAECFPWEAGSTSVLEAGFDDIIGEAGSVHVSRTGDETATSAYGYTYGIDFAGTAVRGDMDLRLLIAQETLDGEDYASDVSAVVFDGLGESSNIEVTLNDDLDNAGFADAIIGLTYTGLDVNSSHTYSY 145
            MRLFFK       VPDTAECFPWEAGSTSVLEAGFDDIIGEAGSVHVSRTGDETATSAYGYTYGIDFAGTAVRGDMDLRLLIAQETLDGEDYAS VSAV+FDGLGESS+IEVTLND LD+AGFADAIIGLTYTG DVNSSHTYSY
Sbjct: 7385 MRLFFK-------VPDTAECFPWEAGSTSVLEAGFDDIIGEAGSVHVSRTGDETATSAYGYTYGIDFAGTAVRGDMDLRLLIAQETLDGEDYASGVSAVIFDGLGESSSIEVTLNDGLDDAGFADAIIGLTYTGSDVNSSHTYSY 7522
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6786.17715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNA6_ECTSI4.950e-8195.17Similar to titin isoform N2-B n=1 Tax=Ectocarpus s... [more]
A0A6H5JYH1_9PHAE4.710e-7691.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6786contigEcto-sp13_S_contig6786:5971..7569 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6786.17715.1mRNA_Ecto-sp13_S_contig6786.17715.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6786 5971..7590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6786.17715.1 ID=prot_Ecto-sp13_S_contig6786.17715.1|Name=mRNA_Ecto-sp13_S_contig6786.17715.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
MRLFFKYHGVYHRVPDTAECFPWEAGSTSVLEAGFDDIIGEAGSVHVSRT
GDETATSAYGYTYGIDFAGTAVRGDMDLRLLIAQETLDGEDYASDVSAVV
FDGLGESSNIEVTLNDDLDNAGFADAIIGLTYTGLDVNSSHTYSY
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