prot_Ecto-sp13_S_contig6786.17714.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6786.17714.1
Unique Nameprot_Ecto-sp13_S_contig6786.17714.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length108
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6786.17714.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 1.280e-40
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0 
Query:    1 KAPDAPGNLSAGVALHVDEVQTVTVAATXXXXXXXXXXXXXXXXXXXXXXXSADEGDTVEGDFALQFPEIQTVTLFSSAEVTSGNFSLTYTAVWANDSTGVLSSDSET 108
            KAPD+PGNLSAGVALHVDEVQTVTVAATXXXXXXXXXXXXXXXXXXXXXXXSADEGDTVEGDFALQFPEIQT+TLFSSAEVTSGNFSLTYTAVWANDSTGVLSSDSET
Sbjct: 15299 KAPDSPGNLSAGVALHVDEVQTVTVAATXXXXXXXXXXXXXXXXXXXXXXXSADEGDTVEGDFALQFPEIQTITLFSSAEVTSGNFSLTYTAVWANDSTGVLSSDSET 15406
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BLAST of mRNA_Ecto-sp13_S_contig6786.17714.1 vs. uniprot
Match: A0A6H5JYH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH1_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 8.650e-38
Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = 0 
Query:    1 KAPDAPGNLSAGVALHVDEVQTVTVAATXXXXXXXXXXXXXXXXXXXXXXXSADEGDTVEGDFALQFPEIQTVTLFSSAEVTSGNFSLTYTAVWANDSTGVLSSDSET 108
            KAPDAPGNLSAGVALHVDEVQTVTVAATXXXXXXXXXXXXXXXXXXXXXXXS DEGDTVEG+FALQFPEIQTV+LFSSAEVTSGNFSLTYTA+WAN STGVLSSDSET
Sbjct: 7891 KAPDAPGNLSAGVALHVDEVQTVTVAATXXXXXXXXXXXXXXXXXXXXXXXSVDEGDTVEGNFALQFPEIQTVSLFSSAEVTSGNFSLTYTALWANYSTGVLSSDSET 7998
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6786.17714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNA6_ECTSI1.280e-4098.15Similar to titin isoform N2-B n=1 Tax=Ectocarpus s... [more]
A0A6H5JYH1_9PHAE8.650e-3895.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6786contigEcto-sp13_S_contig6786:2586..3153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6786.17714.1mRNA_Ecto-sp13_S_contig6786.17714.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6786 2584..3153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6786.17714.1 ID=prot_Ecto-sp13_S_contig6786.17714.1|Name=mRNA_Ecto-sp13_S_contig6786.17714.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=108bp
KAPDAPGNLSAGVALHVDEVQTVTVAATHQDEVQIITTAAPVIVGVQLMT
TSADEGDTVEGDFALQFPEIQTVTLFSSAEVTSGNFSLTYTAVWANDSTG
VLSSDSET
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