prot_Ecto-sp13_S_contig6784.17712.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6784.17712.1
Unique Nameprot_Ecto-sp13_S_contig6784.17712.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length402
Homology
BLAST of mRNA_Ecto-sp13_S_contig6784.17712.1 vs. uniprot
Match: D7FQN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN2_ECTSI)

HSP 1 Score: 605 bits (1561), Expect = 2.960e-215
Identity = 295/378 (78.04%), Postives = 325/378 (85.98%), Query Frame = 0
Query:   28 LPIKMASSN---AAVTNQPPANGGASGLVAPGAVEEPRAGVSTTMVGWGPGELGRGCCWTIATCPYRATQATRLSSITEQQKDFAHFCNVSYNDPGDRPTELRGYELLQDDMPLRDGVDESGATTEPLNGQRWMVYRHPNRVNHVLVFRGTVDKLDMEYDAHLLTKGLADHKLVMDSAAFSLRAMIFLEKQAKDEGDARAGGAGSLDTTCLKFWVAGHSLGGSTAMGVMLLLNDPIDMVATLEDSAKSNKTRRQFLETYKEKIADVYTAAAAESGTSRPYDLVGGDIFNPGSAPRCLLFSNPWVCLFGCLSTPAWIISRCGMFWYRLCTY-RHHGPGADQLVNNHHILGDTISMTFRMGKEKSYWPNHWKVHAIAQFL 401
            L IKMASS    AAVT QPPA+ G+SGLV P  +EEP  GVS TMV WGPGE+G  CCWTI +CPYRATQA+RLSSITEQQ+DFAHFCNVSY++P DRPTELRGYELLQ DMPLRDG DESGATTEPLN QRWMVYRHPNRVNH LVFRGTVDKLD+EYDAHLLTKGLADHKL+MDSAAF+LRAM+FLEKQAK+E  A AGGA SLDTTCLKFWV GHSLGGSTAMGVMLLLNDP+ M ATLE +AK++K+R+QFLE Y+EKI D      AE  ++RPY+LVGGDIFNPGS PRC+L SNP VCLFG LS PA+IISRCG+F YR C   R HGP AD LVNNHH+LGDTISMTFRMGKE+SYWPNHWK+HAIAQFL
Sbjct:   47 LSIKMASSETTAAAVTEQPPADDGSSGLVGPMGMEEPTVGVSNTMVSWGPGEMGMSCCWTIFSCPYRATQASRLSSITEQQRDFAHFCNVSYSNPDDRPTELRGYELLQGDMPLRDGADESGATTEPLNAQRWMVYRHPNRVNHALVFRGTVDKLDIEYDAHLLTKGLADHKLMMDSAAFALRAMVFLEKQAKEERHAGAGGADSLDTTCLKFWVTGHSLGGSTAMGVMLLLNDPVAMAATLEANAKTHKSRQQFLEMYREKIVDXXXXXVAEIYSNRPYELVGGDIFNPGSPPRCILLSNPCVCLFGLLSLPAYIISRCGLFCYRCCKQSRQHGPRADLLVNNHHVLGDTISMTFRMGKEQSYWPNHWKMHAIAQFL 424          
BLAST of mRNA_Ecto-sp13_S_contig6784.17712.1 vs. uniprot
Match: A0A6H5KWJ9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWJ9_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 1.750e-43
Identity = 127/377 (33.69%), Postives = 181/377 (48.01%), Query Frame = 0
Query:   74 PGELGRGCCWTIATCPYRATQATRLSSITEQQKDFAHFCNVSYNDPGD---------RPTELRG----YELLQDDMPLRDGVDESGATTEPLNGQRWMVYRHPNRVNHVLVFRGTVDKLDMEYDAHLLTKGLADHKLVMDSAAFSLRAMIFLEKQAKDEGDARAGGAGSLDTTCLKFWVAGHSLGGSTAMGVMLLLNDPIDMVATLEDSAKSNKTRRQFLETYKEKIADVYTAAAAE-SGTSRPYDLVGGDIFNPGSAPRCL-------LFSNPWV----CLFGCLSTPAWIISRCG------MFWYRLCTYRHHGPGADQLVNNHHILGDTISMTFRMGKEKSYWPN------------------HWKVHAIAQFL 401
            PGE+GRG   T+ T P R  + + L  +T+++K FA   +  Y  PG+            E RG    Y LL+ ++P   G D   A+   LN  RW V+R PN+V++VL FRGT D+ D   D  L+      HK ++++  ++LR ++FL KQ  D G              L+F V GHSLGG+ AMGVM+LL+D I   A      + N TR      Y++++   + A  A  SG + PY+LVGG IFNPG+ P  +         +  W+     + G  +T A      G      ++ YR  T R   P  D+ V  HHI+GD +S  FR+G EK+Y P                    W  H+IA FL
Sbjct:   12 PGEMGRGLIETVLTLPRRLVRTSHLEDMTDEEKAFACLSSEVYKKPGNDDXXXXXNPASDEHRGARCGYTLLRGEIPAAAGDDGPAAS---LNDTRWAVFRAPNQVDYVLAFRGTADRRDALNDVLLVHGDFDQHKYMLNATVWALRVILFLSKQ-HDNGXXXX--XXXXXXXGLRFSVTGHSLGGTVAMGVMVLLHD-IPTTAR----RRPNDTR------YQQQVLGAWNAERANWSGAAAPYELVGGHIFNPGAWPGLVGPVAGGSAVAGFWLTGGFAVAGAAATAAMCAVTVGSGCVLAIYLYRSHTERLSDP-VDKRVTTHHIIGDVVSGFFRLGTEKNYMPKDKRARRLATACSPGKIGKEWGCHSIANFL 370          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6784.17712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQN2_ECTSI2.960e-21578.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWJ9_9PHAE1.750e-4333.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..401
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 107..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6784contigEcto-sp13_S_contig6784:4021..6283 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6784.17712.1mRNA_Ecto-sp13_S_contig6784.17712.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6784 4020..7066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6784.17712.1 ID=prot_Ecto-sp13_S_contig6784.17712.1|Name=mRNA_Ecto-sp13_S_contig6784.17712.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=402bp
MLVHACLATPLRSLLRSLAAHRTPQSHLPIKMASSNAAVTNQPPANGGAS
GLVAPGAVEEPRAGVSTTMVGWGPGELGRGCCWTIATCPYRATQATRLSS
ITEQQKDFAHFCNVSYNDPGDRPTELRGYELLQDDMPLRDGVDESGATTE
PLNGQRWMVYRHPNRVNHVLVFRGTVDKLDMEYDAHLLTKGLADHKLVMD
SAAFSLRAMIFLEKQAKDEGDARAGGAGSLDTTCLKFWVAGHSLGGSTAM
GVMLLLNDPIDMVATLEDSAKSNKTRRQFLETYKEKIADVYTAAAAESGT
SRPYDLVGGDIFNPGSAPRCLLFSNPWVCLFGCLSTPAWIISRCGMFWYR
LCTYRHHGPGADQLVNNHHILGDTISMTFRMGKEKSYWPNHWKVHAIAQF
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase