prot_Ecto-sp13_S_contig67810.17707.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig67810.17707.1
Unique Nameprot_Ecto-sp13_S_contig67810.17707.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
BLAST of mRNA_Ecto-sp13_S_contig67810.17707.1 vs. uniprot
Match: D7FSW2_ECTSI (Glycosyl transferase, family 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW2_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 3.040e-47
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0
Query:    1 GLRRAEAGPRLVPNAECHVGEGFVSVVVPAYNEGDGVKLTLATIDELAQDKSLVEIIVVDAGCKDNTMDAVASMKLDVK 79
            GLRRAEAGPRLVPNAECHVGEGFVSVVVPAYNEGDGVKLTLATIDELAQDKSLVEIIVVDAGCKD+TMDAVASMKLDVK
Sbjct:   19 GLRRAEAGPRLVPNAECHVGEGFVSVVVPAYNEGDGVKLTLATIDELAQDKSLVEIIVVDAGCKDHTMDAVASMKLDVK 97          
BLAST of mRNA_Ecto-sp13_S_contig67810.17707.1 vs. uniprot
Match: A0A6H5L731_9PHAE (Glyco_trans_2-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L731_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.480e-44
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0
Query:    1 GLRRAEAGPRLVPNAECHVGEGFVSVVVPAYNEGDGVKLTLATIDELAQDKSLVEIIVVDAGCKDNTMDAVASMKLDVK 79
            GLRRAEAGPRLVPN ECHVGEGFVSVVVPAYNEGDGVKLTLATIDELAQDKSLVEIIVVDAGCKD+TMDAVASMKLDVK
Sbjct:   19 GLRRAEAGPRLVPNTECHVGEGFVSVVVPAYNEGDGVKLTLATIDELAQDKSLVEIIVVDAGCKDHTMDAVASMKLDVK 97          
BLAST of mRNA_Ecto-sp13_S_contig67810.17707.1 vs. uniprot
Match: A0A835ZCJ3_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ3_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.060e-7
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0
Query:   11 LVPNAECHVG-EGFVSVVVPAYNEGDGVKLTLATIDELAQDKSLVEIIVVDAGCKDNTM 68
            + P +   +G +G ++V++PAYNEG G+  TLA +    +   LVE+++VD GC D+TM
Sbjct:   37 ITPGSGPQIGKDGLITVIIPAYNEGAGIADTLAALSAATEATGLVEVVIVDGGCSDDTM 95          
BLAST of mRNA_Ecto-sp13_S_contig67810.17707.1 vs. uniprot
Match: A0A7S3PIZ7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PIZ7_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 4.800e-6
Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   18 HVGEGFVSVVVPAYNEG-DGVKLTLATIDELAQDKSLVEIIVVDAGCKDNTMDAV--ASMKLDVK 79
            H     VSVV+P YNEG + +   L  +D+    KS  E+IVVDAGC D+TM+A+  A M++ V+
Sbjct:   68 HTSVSKVSVVIPVYNEGAENLIQNLERLDQSTLGKSCTEVIVVDAGCSDDTMEALVKADMRIPVR 132          
BLAST of mRNA_Ecto-sp13_S_contig67810.17707.1 vs. uniprot
Match: A0A0M0JLK4_9EUKA (Glycosyl transferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JLK4_9EUKA)

HSP 1 Score: 50.8 bits (120), Expect = 1.710e-5
Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 0
Query:   24 VSVVVPAYNEGDGVKLTLATIDELAQDKSLVEIIVVDAGCKDNTMDAVASMKLDVK 79
            +SVVVPA+NE   + + L T++  A     V+++VVDAGCKD+TM  V +     K
Sbjct:   78 ISVVVPAFNEARSIGMCLETLERHASSLKRVQVVVVDAGCKDDTMAIVTAWAAQTK 133          
BLAST of mRNA_Ecto-sp13_S_contig67810.17707.1 vs. uniprot
Match: A0A7S3Y2L9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2L9_HETAK)

HSP 1 Score: 47.8 bits (112), Expect = 7.090e-5
Identity = 21/46 (45.65%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   23 FVSVVVPAYNEGDGVKLTLATIDELAQDKSLVEIIVVDAGCKDNTM 68
             +SVV+PA+NE   +   L  + + A++  L+E++VVDAGC DNTM
Sbjct:   52 ILSVVIPAFNEERSILKVLNVVRDRAENPELLEVVVVDAGCIDNTM 97          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67810.17707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FSW2_ECTSI3.040e-4798.73Glycosyl transferase, family 2 n=1 Tax=Ectocarpus ... [more]
A0A6H5L731_9PHAE3.480e-4497.47Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A835ZCJ3_9STRA1.060e-740.68Nucleotide-diphospho-sugar transferase n=1 Tax=Tri... [more]
A0A7S3PIZ7_9STRA4.800e-644.62Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A0M0JLK4_9EUKA1.710e-542.86Glycosyl transferase n=1 Tax=Chrysochromulina tobi... [more]
A0A7S3Y2L9_HETAK7.090e-545.65Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001173Glycosyltransferase 2-likePFAMPF00535Glycos_transf_2coord: 25..72
e-value: 1.1E-6
score: 28.6
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 16..79
e-value: 8.5E-13
score: 50.4
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 23..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig67810contigEcto-sp13_S_contig67810:1..631 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig67810.17707.1mRNA_Ecto-sp13_S_contig67810.17707.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig67810 1..631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig67810.17707.1 ID=prot_Ecto-sp13_S_contig67810.17707.1|Name=mRNA_Ecto-sp13_S_contig67810.17707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
GLRRAEAGPRLVPNAECHVGEGFVSVVVPAYNEGDGVKLTLATIDELAQD
KSLVEIIVVDAGCKDNTMDAVASMKLDVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001173Glyco_trans_2-like
IPR029044Nucleotide-diphossugar_trans