prot_Ecto-sp13_S_contig12082.1770.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12082.1770.1
Unique Nameprot_Ecto-sp13_S_contig12082.1770.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
BLAST of mRNA_Ecto-sp13_S_contig12082.1770.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 6.460e-61
Identity = 98/117 (83.76%), Postives = 100/117 (85.47%), Query Frame = 0
Query:    1 TFGGTIANIGGDITANAGSLFFDDFAENSGDGGLGGAIYNYGGGIVKLTGSTTFRQNYGNWGGAVFNSAVPTAYFTAEDESYVMPTISYPEDTVFEDNYGQYCNDFASDFDEETCGL 117
            TFGGTIANIGGD+TANAGSLFFD FAENSGDGGL             LTGSTTFRQNYGNWGGAVFNSAVP AYFTAEDESYVMPTISYPEDT+FEDN  QYCNDFASDFDEETCGL
Sbjct:  262 TFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFNSAVPNAYFTAEDESYVMPTISYPEDTIFEDNDAQYCNDFASDFDEETCGL 378          
BLAST of mRNA_Ecto-sp13_S_contig12082.1770.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 6.120e-18
Identity = 51/113 (45.13%), Postives = 66/113 (58.41%), Query Frame = 0
Query:    3 GGTIANIGGDITANAGSLFFDDFAENSGDGGLGGAIYNYGGGIVKLTGSTTFRQNYGNWGGAVFNSAVPTAYFTAEDESYVMPTISYPEDTVFEDNYGQYCNDFASDFDEETC 115
            GG + N GG +  NAGSLF  + A  SGDGGLGGAIYN   G+V L GSTTFR+N    GGA++ S         E+        ++P+DTVFEDN  ++C D  +  D + C
Sbjct:  273 GGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYTSDGD------EENGEPASVTTFPDDTVFEDNSAEHCPDVHNG-DSDNC 378          
BLAST of mRNA_Ecto-sp13_S_contig12082.1770.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 5.880e-17
Identity = 52/113 (46.02%), Postives = 64/113 (56.64%), Query Frame = 0
Query:    3 GGTIANIGGDITANAGSLFFDDFAENSGDGGLGGAIYNYGGGIVKLTGSTTFRQNYGNWGGAVFNSAVPTAYFTAEDESYVMPTISYPEDTVFEDNYGQYCNDFASDFDEETC 115
            GG + N GG +  NAGSLF  + A  SGDGGLGGAIYN   G V L GSTTFR+N    GGA++      A   A   +      ++P+DTVFEDN   +C D   D D + C
Sbjct:  273 GGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAIYTDDGSVANGEAASVT------TFPDDTVFEDNRADFCPD-VFDGDNDNC 378          
BLAST of mRNA_Ecto-sp13_S_contig12082.1770.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 3.960e-5
Identity = 34/113 (30.09%), Postives = 50/113 (44.25%), Query Frame = 0
Query:    3 GGTIANIGGDITANAGSLFFDDFAENSGDGGLGGAIYNYGGGIVKLTGSTTFRQNYGNWGGAVFNSAVPTAYFTAEDESYVMPTISYPEDTVFEDNYGQYCNDFASDFDEETC 115
            GG + N GG +  NAGSLF  ++A  SGDGG GGAI+N                   +WGGA++ +          D        ++P+D        +YC D  +  D++ C
Sbjct:  158 GGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAIYTN----------DADGPGSVTTFPDDXXXXXXRAEYCPDVHNG-DDDNC 259          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12082.1770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KTD4_9PHAE6.460e-6183.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLJ6_ECTSI6.120e-1845.13Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI5.880e-1746.02Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI3.960e-530.09Asn/thr-rich large protein family protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12082contigEcto-sp13_S_contig12082:3909..5015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12082.1770.1mRNA_Ecto-sp13_S_contig12082.1770.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12082 3700..5015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12082.1770.1 ID=prot_Ecto-sp13_S_contig12082.1770.1|Name=mRNA_Ecto-sp13_S_contig12082.1770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
TFGGTIANIGGDITANAGSLFFDDFAENSGDGGLGGAIYNYGGGIVKLTG
STTFRQNYGNWGGAVFNSAVPTAYFTAEDESYVMPTISYPEDTVFEDNYG
QYCNDFASDFDEETCGL*
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