prot_Ecto-sp13_S_contig678.17704.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig678.17704.1
Unique Nameprot_Ecto-sp13_S_contig678.17704.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
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BLAST of mRNA_Ecto-sp13_S_contig678.17704.1 vs. uniprot
Match: A0A6H5KEY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEY8_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 5.190e-60
Identity = 153/209 (73.21%), Postives = 155/209 (74.16%), Query Frame = 0 
Query:    1 MSQQRGCIEEGDWGNGRDDVGGDELGEEGGDPDQGWAMSAEWEEYLRNSPGVSRYLEGVQAKAYTWKDGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDPTAATDNRGYXXXXXXXXXXXXXXXXXRGKAPPRGGKSNGKNKSPTERGKSNNSGVNNDXXXDTASRALDLELAKIEAHALLYAQQQQHRPLEDAMAAPPTT 209
            MSQ+RGC EEGDWGNGRDDVG DELGEEGGDPDQGWAMSAEWEEYLRNSPGVSRYLEGVQAKAYTWKDGRGG XXXXXXXXXXXXXXXXX              DLDPT  TDNRGY    X XXXXXXXXXXX GKAP                           XXX  ASRALDLELAKI+AHALLYAQQQQHRPLEDAMAAPPTT
Sbjct:  266 MSQRRGCTEEGDWGNGRDDVGDDELGEEGGDPDQGWAMSAEWEEYLRNSPGVSRYLEGVQAKAYTWKDGRGGSXXXXXXXXXXXXXXXXXNTSDKSNSSGIVAADLDPTTTTDNRGYTNTNXKXXXXXXXXXXX-GKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASRALDLELAKIKAHALLYAQQQQHRPLEDAMAAPPTT 473
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BLAST of mRNA_Ecto-sp13_S_contig678.17704.1 vs. uniprot
Match: D8LNC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC4_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 1.640e-53
Identity = 142/208 (68.27%), Postives = 145/208 (69.71%), Query Frame = 0 
Query:    1 MSQQRGCIEEGDWGNGRDDVGGDELGEEGGDPDQGWAMSAEWEEYLRNSPGVSRYLEGVQAKAYTWKDGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDPTAATDNRGYXXXXXXXXXXXXXXXXXRGKAPPRGGKSNGKNKSPTERGKSNNSGVNNDXXXDTASRALDLELAKIEAHALLYAQQQQHRPLEDAMAAPPT 208
            MSQQRGC+EE  WG+GRDD GGDELGEEGGDPDQGWAMSAEWEEYLRNSPGVSRYLEGV AKAYTWKDGRGG XXXXXXXXXXXXXXX                DLDPT  TDNRG+     XXXXXXXXXXXX                                XXX  ASRALDLELAKIEAHALLYAQQQQHRPLEDAM APPT
Sbjct:  257 MSQQRGCVEERGWGSGRDDAGGDELGEEGGDPDQGWAMSAEWEEYLRNSPGVSRYLEGVPAKAYTWKDGRGGGXXXXXXXXXXXXXXXGSSTSDNGSSSGIVAADLDPTMTTDNRGHTNTKQXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXAASRALDLELAKIEAHALLYAQQQQHRPLEDAMRAPPT 454
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig678.17704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KEY8_9PHAE5.190e-6073.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNC4_ECTSI1.640e-5368.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig678contigEcto-sp13_S_contig678:19813..21553 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig678.17704.1mRNA_Ecto-sp13_S_contig678.17704.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig678 18322..22258 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig678.17704.1 ID=prot_Ecto-sp13_S_contig678.17704.1|Name=mRNA_Ecto-sp13_S_contig678.17704.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MSQQRGCIEEGDWGNGRDDVGGDELGEEGGDPDQGWAMSAEWEEYLRNSP
GVSRYLEGVQAKAYTWKDGRGGGGKGNGNKKGRKKRGTGSNTSDISNSSG
IAAADLDPTAATDNRGYTNTNTNTKQQQQQQQQQRGKAPPRGGKSNGKNK
SPTERGKSNNSGVNNDDDDDTASRALDLELAKIEAHALLYAQQQQHRPLE
DAMAAPPTT*
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