mRNA_Ecto-sp13_S_contig10150.177.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: D7FQR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR4_ECTSI)

HSP 1 Score: 414 bits (1063), Expect = 2.400e-144
Identity = 215/225 (95.56%), Postives = 220/225 (97.78%), Query Frame = 1

Query:    1 MNGGRFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFHR 675
            MNGGRFLLLVTG+SRGFGRCVAEEFVRQVAPANPVDL+LVARSETGLESATDSVNEIAASI APGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVL+NNAGSLGHIGVAS LPSLAAFRSEMDFNITSALWLSSRF+AVFGAKRPNLSSGNSVEGTLGE GADVDKNGATT +TASADTVHDVSNNIVVNISSLAALQPF TWGGYSSGKAARDMFHR
Sbjct:    6 MNGGRFLLLVTGASRGFGRCVAEEFVRQVAPANPVDLVLVARSETGLESATDSVNEIAASINAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLVNNAGSLGHIGVASALPSLAAFRSEMDFNITSALWLSSRFSAVFGAKRPNLSSGNSVEGTLGESGADVDKNGATTAATASADTVHDVSNNIVVNISSLAALQPFETWGGYSSGKAARDMFHR 230

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BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: A0A836CM32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM32_9STRA)

HSP 1 Score: 122 bits (306), Expect = 7.270e-30
Identity = 88/250 (35.20%), Postives = 121/250 (48.40%), Query Frame = 1

Query:    1 MNGGRFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGG--VVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSN------------------------NIVVNISSLAALQPFVTWGGYSSGKAARDMFH 672
            M+G  +L++VTG+SRG GRC+A+E VR +   + + L+L+ARSE+GL        E AASI       V +  +P+DLG+L  LE +L+  FS +D   Y R VL NNAGSLG +  A +L S A  R  +D NITSA+W++  F  +   +                                                                  ++VVNISSLAA++PF TW  Y +GKAARDMFH
Sbjct:    1 MSGLPWLVIVTGASRGLGRCLAQEAVRSIGKDHRMTLLLMARSESGLM-------ETAASIRGMNSEDVTIEVQPVDLGNLSTLETSLQNAFSGLDARHYQRCVLFNNAGSLGELAPAMDL-SFAGLREAVDLNITSAMWVTCAFVNLILPRWQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMPDVVVNISSLAAVKPFPTWAAYCAGKAARDMFH 242

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BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: A0A7S4W3N7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W3N7_9STRA)

HSP 1 Score: 117 bits (293), Expect = 6.650e-28
Identity = 80/237 (33.76%), Postives = 121/237 (51.05%), Query Frame = 1

Query:   13 RFLLLVTGSSRGFGRCVAEEFVRQ---VAPANPVDLILVARSETGL--------ESATDSVNEIAASIGAPGGVV-VRKEPLDLGDLDHLEANLEGVF-----SRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFH 672
            R +++VTG+SRG GR +A  FV++       +P+ ++L+ARSE GL        + A   ++  A    A   ++ +    +DL DLD+L+ NL  +      S+ +   + +A+L+NNAGSLGH+G    + SL   ++ +DFNITS+LW+S+RF   F  +        +V                                  VVNISSL A++PF T G Y +GKAARDMFH
Sbjct:   40 RTVVIVTGASRGLGRAIALSFVKEEKTFQKFSPLRILLLARSEEGLVGTKSLMQQEADKFLDTTANDNDATSDLLDMTHHVIDLSDLDNLDDNLNDILDFSSSSKNNLPPFEKAILINNAGSLGHLGPCMNMTSLKELQTSLDFNITSSLWVSTRFVRSFSQQXXXXXXXKTV----------------------------------VVNISSLCAIEPFKTMGVYCTGKAARDMFH 242

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BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: A0A8K1FK79_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK79_PYTOL)

HSP 1 Score: 115 bits (289), Expect = 1.090e-27
Identity = 75/223 (33.63%), Postives = 109/223 (48.88%), Query Frame = 1

Query:   13 RFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIG--APGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFHR 675
            R  +++TG+SRGFGRC+A +F R++  A  VD+ L+AR E  L      V E  AS    A   +    + +DLGD        + +  ++  T Y R  L++NAGS+G +    ELPS A      +FN+ S +W + RF  V+GA R  L S   +  +                               +VNISS  A++PF T+G Y +GKAAR+M HR
Sbjct:    2 RSAVVITGASRGFGRCLALDFTREIT-AGDVDMFLLARHEGDLGETVRLVTEAWASKANAAESKLQTFVKTVDLGDQVDYVTKFDAILEQLQATAYDRVYLVHNAGSIGDLCFTQELPSPAELAQYWEFNVNSVVWFNKRFLDVYGATREELLSDAPLSASY---------------------------QAFIVNISSGCAIKPFKTYGMYCTGKAAREMHHR 196

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BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: W7U863_9STRA (Sepiapterin reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U863_9STRA)

HSP 1 Score: 114 bits (285), Expect = 5.670e-27
Identity = 84/235 (35.74%), Postives = 119/235 (50.64%), Query Frame = 1

Query:    4 NGGRFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPT------------RYSRAVLLNNAGSLGHIGVASEL-PSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMF 669
            +G RFL+ +TG+SRGFGRC+A E  R+  PA  VD+ L+AR+   L +    + E + S  +  GV V   P DLG+L+ LE N   +F+ +D              +Y    L NNAGS+G I  A +L   L A R  +D N+TS++ ++S F   F      LSS ++    L                              ++NISS+AA+QPF +WG Y +GKAARDMF
Sbjct:    5 SGTRFLVFITGASRGFGRCLALEAARKWGPA--VDMHLIARNAEALTAVKRDI-EASLSDQSKIGVRVWTWPFDLGNLETLEPNFARIFATVDEFSAEQESTAMIMHKYGNVYLFNNAGSVGPIAYAKDLCTDLPALRQSLDLNLTSSILITSLFLRRF----CTLSSPSNKVPAL-----------------------------FIINISSMAAIQPFHSWGVYCAGKAARDMF 203

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BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: K3WFV0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFV0_GLOUD)

HSP 1 Score: 108 bits (271), Expect = 4.240e-25
Identity = 66/218 (30.28%), Postives = 105/218 (48.17%), Query Frame = 1

Query:   22 LLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFHR 675
            +L+TG+SRGFGRCVA +F +Q++  + +D+ L ARSE  L+     V +          +      +DLG+ D     ++ + ++I    Y+R  +++NAGSLGH+G+  E  S         FN+ S LW + RF   FGA R  L                             A+     + +++VN++SL  +QP  T+G Y   K AR+M H+
Sbjct:    5 VLITGASRGFGRCVAVDFAQQISAGDDLDIHLWARSEADLKETERMVQDAWERTHPSHTLRTFTLTVDLGNKDDYTPKIDALLAQIKAESYARVFVVHNAGSLGHLGLTQEWSSHEMLDQYWHFNVHSVLWFNKRFLEEFGASREELQK--------------------------PAEAAQPPTLSVIVNVTSLFGIQPAATFGLYCLSKGAREMHHK 196

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BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: A0A080ZH75_PHYPR (Sepiapterin reductase n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A080ZH75_PHYPR)

HSP 1 Score: 106 bits (265), Expect = 8.440e-25
Identity = 70/220 (31.82%), Postives = 113/220 (51.36%), Query Frame = 1

Query:   22 LLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTR-YSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVV-NISSLAALQPFVTWGGYSSGKAARDMFHR 675
            +LVTG+SRGFGRC+A +F R++  ++ +DL L AR E GL+  +  V E   S+     + +  +P+DL +       L+ + +++     Y R  L++NAG+LG +G A E PS +      + N+TS +WL+ RF  VFGA R +++                               V D +  +V+ N+SS +A+ P+ T   Y + KAAR+M  R
Sbjct:    5 VLVTGASRGFGRCLALDFARELVSSD-LDLFLWARDENGLKETSRLVREARDSLQQAEDLHIFIQPVDLRNSADYTKKLDDLLAQLTTAAPYDRVFLVHNAGALGGLGFAQECPSPSEMARHFELNVTSVMWLNKRFLDVFGASRRDITKLP----------------------------VSDTTTKLVIFNVSSRSAIAPYPTLSQYCTAKAAREMHFR 195

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BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: H3H918_PHYRM (Sepiapterin reductase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H918_PHYRM)

HSP 1 Score: 106 bits (265), Expect = 3.440e-24
Identity = 77/219 (35.16%), Postives = 110/219 (50.23%), Query Frame = 1

Query:   22 LLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEM-DFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFHR 675
            +LVTG+SRGFGRC+  +FVR++   N VDL L ARSE  L+              A G +    + +DL D       ++ V  ++    Y R  L++NAGS G +G+A E  S     ++  + N+TS LWL+ RF  V+GA R  L                      T+TS +   + H V    +VNI+SL  ++PF T   Y +GKAAR+M HR
Sbjct:    6 VLVTGASRGFGRCLTLDFVRELKTQN-VDLHLWARSEEDLQETERLARVEWQKAAATGELRCFLQCVDLSDAADYTHKVDHVLLQLAAQSYGRVFLVHNAGSQGQLGLAQECASSPTELAQYWELNVTSVLWLNKRFLDVYGASREEL---------------------LTSTSVSEEKSTHLV----IVNITSLCGIEPFKTHMMYCTGKAAREMHHR 198

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BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: W2PPJ8_PHYPN (Sepiapterin reductase n=7 Tax=Phytophthora TaxID=4783 RepID=W2PPJ8_PHYPN)

HSP 1 Score: 106 bits (265), Expect = 3.640e-24
Identity = 70/220 (31.82%), Postives = 112/220 (50.91%), Query Frame = 1

Query:   22 LLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTR-YSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVV-NISSLAALQPFVTWGGYSSGKAARDMFHR 675
            +LVTG+SRGFGRC+A +F R++  ++ +DL L AR E GL+  +  V E   S+     + +  +P+DL D       L+ +  ++     Y R  L++NAG+LG +G A E PS +      + N++S +WL+ RF  VFGA R +++                               V D +  +V+ N+SS +A+ P+ T   Y + KAAR+M  R
Sbjct:    5 VLVTGASRGFGRCLALDFARELVSSD-LDLFLWARDENGLKETSRLVREARDSLQQTEDLHIFIQPVDLRDSADYTKKLDDLLGQLTTAAPYDRVFLVHNAGALGGLGFAQECPSPSEMARHFELNVSSVMWLNKRFLDVFGASRRDITKLP----------------------------VSDTTTKLVIFNVSSRSAIAPYPTLSQYCTAKAAREMHFR 195

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BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Match: A0A8K1CF97_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CF97_PYTOL)

HSP 1 Score: 106 bits (264), Expect = 5.180e-24
Identity = 70/221 (31.67%), Postives = 110/221 (49.77%), Query Frame = 1

Query:   13 RFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESATDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAKRPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISSLAALQPFVTWGGYSSGKAARDMFHR 675
            R ++++TG+SRG+GRC+A +F R++   + VD+ L AR E  L      V+E  A   + G + V  + +DL         +E +  ++    Y +  L++NAGSLG +G  +EL S A   +  + N+ S +W + RF  VFGA R  L +  +V                              +   ++NISSL A++PF T G Y +GKAAR+M  R
Sbjct:    2 RSVVVITGASRGYGRCLALDFAREIEQGD-VDMYLWARHEADLAETKRLVHE--AWQQSKGALDVATQVVDLSLQADYVPKIETLIVQLQSKSYEQVFLVHNAGSLGDLGYTNELSSPAQLSAYWELNVNSVVWFNKRFLDVFGATREELVASTAVS-------------------------TKPATQATIINISSLCAIEPFATQGLYCTGKAAREMHFR 194

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig10150.177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D7FQR4_ECTSI	2.400e-144	95.56	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CM32_9STRA	7.270e-30	35.20	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S4W3N7_9STRA	6.650e-28	33.76	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A8K1FK79_PYTOL	1.090e-27	33.63	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
W7U863_9STRA	5.670e-27	35.74	Sepiapterin reductase n=1 Tax=Nannochloropsis gadi...	[more]
K3WFV0_GLOUD	4.240e-25	30.28	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A080ZH75_PHYPR	8.440e-25	31.82	Sepiapterin reductase n=1 Tax=Phytophthora parasit...	[more]
H3H918_PHYRM	3.440e-24	35.16	Sepiapterin reductase n=1 Tax=Phytophthora ramorum...	[more]
W2PPJ8_PHYPN	3.640e-24	31.82	Sepiapterin reductase n=7 Tax=Phytophthora TaxID=4...	[more]
A0A8K1CF97_PYTOL	5.180e-24	31.67	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig10150	contig	Ecto-sp13_S_contig10150:60..1162 -

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	0
Start	1
Seed ortholog score	419.1
Seed ortholog evalue	1.3e-114
Seed eggNOG ortholog	2880.D7FQR4
Preferred name	SPR
Model size	675
KEGG rclass	RC00017,RC00425,RC00602,RC00823,RC02162
KEGG ko	ko:K00072,ko:K05858,ko:K16489
KEGG Reaction	R01813,R02975,R03332,R03435,R08208,R10952,R11762,R11763
KEGG Pathway	ko00562,ko00790,ko01100,ko04015,ko04020,ko04022,ko04062,ko04070,ko04071,ko04072,ko04261,ko04270,ko04310,ko04371,ko04540,ko04611,ko04621,ko04713,ko04720,ko04723,ko04724,ko04725,ko04726,ko04728,ko04730,ko04745,ko04750,ko04911,ko04912,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04924,ko04925,ko04926,ko04927,ko04933,ko04934,ko04961,ko04970,ko04971,ko04972,ko05010,ko05016,ko05142,ko05143,ko05146,ko05200,map00562,map00790,map01100,map04015,map04020,map04022,map04062,map04070,map04071,map04072,map04261,map04270,map04310,map04371,map04540,map04611,map04621,map04713,map04720,map04723,map04724,map04725,map04726,map04728,map04730,map04745,map04750,map04911,map04912,map04915,map04916,map04918,map04919,map04921,map04922,map04924,map04925,map04926,map04927,map04933,map04934,map04961,map04970,map04971,map04972,map05010,map05016,map05142,map05143,map05146,map05200
KEGG Module	M00130,M00842
Hectar predicted targeting category	other localisation
GOs	GO:0000166,GO:0000902,GO:0000904,GO:0001505,GO:0003674,GO:0003824,GO:0004033,GO:0004757,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006520,GO:0006558,GO:0006584,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0006809,GO:0006950,GO:0006979,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009108,GO:0009653,GO:0009712,GO:0009987,GO:0010033,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0018958,GO:0019222,GO:0019438,GO:0019751,GO:0019752,GO:0019889,GO:0022008,GO:0030154,GO:0030182,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032768,GO:0032989,GO:0034311,GO:0034312,GO:0034641,GO:0036094,GO:0040008,GO:0040014,GO:0042133,GO:0042136,GO:0042221,GO:0042415,GO:0042417,GO:0042428,GO:0042430,GO:0042558,GO:0042559,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046209,GO:0046483,GO:0046983,GO:0048037,GO:0048468,GO:0048638,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050661,GO:0050662,GO:0050789,GO:0050790,GO:0050793,GO:0050879,GO:0050881,GO:0050882,GO:0050896,GO:0050999,GO:0051186,GO:0051188,GO:0051239,GO:0051341,GO:0055114,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0072593,GO:0097159,GO:0097164,GO:1901160,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901615,GO:1901617,GO:1902221,GO:1903409,GO:2001057
Exons	2
EggNOG free text desc.	sepiapterin reductase
EggNOG OGs	COG1028@1,KOG1204@2759
EC	1.1.1.153,3.1.4.11
Cds size	675
COG Functional cat.	IQ
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko03036,ko04131,ko04147

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig10150:60..1162-
coding sequence from alignment at Ecto-sp13_S_contig10150:60..1162-

protein sequence of mRNA_Ecto-sp13_S_contig10150.177.1

>prot_Ecto-sp13_S_contig10150.177.1 ID=prot_Ecto-sp13_S_contig10150.177.1|Name=mRNA_Ecto-sp13_S_contig10150.177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp
MNGGRFLLLVTGSSRGFGRCVAEEFVRQVAPANPVDLILVARSETGLESA
TDSVNEIAASIGAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSR
AVLLNNAGSLGHIGVASELPSLAAFRSEMDFNITSALWLSSRFTAVFGAK
RPNLSSGNSVEGTLGECGADVDKNGATTTSTASADTVHDVSNNIVVNISS
LAALQPFVTWGGYSSGKAARDMFHR

mRNA from alignment at Ecto-sp13_S_contig10150:60..1162-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig10150.177.1 ID=mRNA_Ecto-sp13_S_contig10150.177.1|Name=mRNA_Ecto-sp13_S_contig10150.177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1103bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10150:60..1162- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAATGGAGGACGATTCTTGCTGTTGGTCACCGGGTCATCTCGCGGCTT
CGGGCGCTGCGTTGCGGAGGAATTCGTTCGCCAGGTTGCCCCTGCCAACC
CCGTTGACCTCATCCTCGTTGCAAGGAGCGAAACTGGCCTGGAGAGTGCC
ACCGATTCTGTCAATGAGATCGCCGCGAGTATCGGCGCCCCCGGTGGCGT
CGTCGTTCGGAAAGAACCCTTGGACTTGGGAGACCTGGATCACCTCGAGG
CAAACCTGGAGGGTGTTTTCAGTCGGATAGGTGAGTCGTCGAGGACCAAA
GCCCGATCGATCAACTTCAAGTCGACCGCATGAGGTTTACCACAGCGAGG
GAAATTGATTGCATTTTGTATGTACTACGCCGACGAACATCTTCAAATCG
AGCCCTCGCCCCTTTTCGTTGGTTTGGTCATGAGTGGTGATCTCATGCCC
AACTGCGTTGAATCACGGCCGTGCACACAGGGTTTCGCCCTGCTCAGCAC
AACGCGAATATTCCAGGAGCTTCTTCTCCGGTGTCCTTGGCCTACACACA
AGCATATCTTCGTGTCGGTACTGTGTGTCTTGTTGAATAAACGAACATAT
CGTTCGTTCAAAGGAGGAAAGTGGTTGTCAACCCCTCCATGCACACGTTG
TGCAAAACCGCTTGCGCGTTTACCTCGGCTGCACACTGTACCCTCCATCA
CTCCACAGACCCAACCCGCTACTCACGAGCGGTGCTGCTCAACAACGCCG
GCTCCCTTGGCCACATCGGCGTTGCGAGCGAGCTACCCTCGCTGGCCGCG
TTTCGATCAGAGATGGATTTCAACATTACGTCGGCCCTTTGGCTATCGTC
GCGCTTTACCGCCGTCTTTGGCGCGAAAAGACCGAACCTAAGTTCCGGCA
ATTCTGTTGAAGGCACGTTGGGTGAATGTGGGGCTGACGTCGACAAAAAT
GGGGCAACTACTACTTCTACCGCAAGTGCTGACACGGTGCACGACGTGTC
GAACAACATCGTGGTGAACATCTCAAGCCTGGCCGCGTTGCAACCATTTG
TGACCTGGGGAGGGTACAGCTCGGGGAAGGCTGCTCGAGACATGTTCCAC
AGG

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10150:60..1162-

>mRNA_Ecto-sp13_S_contig10150.177.1 ID=mRNA_Ecto-sp13_S_contig10150.177.1|Name=mRNA_Ecto-sp13_S_contig10150.177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=675bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10150:60..1162- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAATGGAGGACGATTCTTGCTGTTGGTCACCGGGTCATCTCGCGGCTT
CGGGCGCTGCGTTGCGGAGGAATTCGTTCGCCAGGTTGCCCCTGCCAACC
CCGTTGACCTCATCCTCGTTGCAAGGAGCGAAACTGGCCTGGAGAGTGCC
ACCGATTCTGTCAATGAGATCGCCGCGAGTATCGGCGCCCCCGGTGGCGT
CGTCGTTCGGAAAGAACCCTTGGACTTGGGAGACCTGGATCACCTCGAGG
CAAACCTGGAGGGTGTTTTCAGTCGGATAGACCCAACCCGCTACTCACGA
GCGGTGCTGCTCAACAACGCCGGCTCCCTTGGCCACATCGGCGTTGCGAG
CGAGCTACCCTCGCTGGCCGCGTTTCGATCAGAGATGGATTTCAACATTA
CGTCGGCCCTTTGGCTATCGTCGCGCTTTACCGCCGTCTTTGGCGCGAAA
AGACCGAACCTAAGTTCCGGCAATTCTGTTGAAGGCACGTTGGGTGAATG
TGGGGCTGACGTCGACAAAAATGGGGCAACTACTACTTCTACCGCAAGTG
CTGACACGGTGCACGACGTGTCGAACAACATCGTGGTGAACATCTCAAGC
CTGGCCGCGTTGCAACCATTTGTGACCTGGGGAGGGTACAGCTCGGGGAA
GGCTGCTCGAGACATGTTCCACAGG