mRNA_Ecto-sp13_S_contig67755.17699.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig67755.17699.1 vs. uniprot
Match: D7FWL4_ECTSI (Asparaginase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWL4_ECTSI) HSP 1 Score: 177 bits (449), Expect = 4.320e-52 Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 2
Query: 2 STVLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELMSADDMPFFDIVEYDPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVC 265
STVLVINTGGTLGMRKED SGGLAPVPGYFTSQMLTMEEL+ ADDMPFFDIVEYDPLLDSSCF+PSDWARIAIDIGRAYHCYDGFVVC
Sbjct: 76 STVLVINTGGTLGMRKEDKSGGLAPVPGYFTSQMLTMEELVIADDMPFFDIVEYDPLLDSSCFEPSDWARIAIDIGRAYHCYDGFVVC 163
BLAST of mRNA_Ecto-sp13_S_contig67755.17699.1 vs. uniprot
Match: A0A6H5K9P1_9PHAE (Asparaginase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9P1_9PHAE) HSP 1 Score: 155 bits (392), Expect = 1.890e-47 Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 2
Query: 41 MRKEDNSGGLAPVPGYFTSQMLTMEELMSADDMPFFDIVEYDPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVC 265
MRKE+ SGGLAPVPGYFTSQMLTMEEL+SADDMPFFDIVEYDPLLDSSCFQPSDWARIA+DIGRAYHCYDGFVVC
Sbjct: 1 MRKENKSGGLAPVPGYFTSQMLTMEELVSADDMPFFDIVEYDPLLDSSCFQPSDWARIAVDIGRAYHCYDGFVVC 75
BLAST of mRNA_Ecto-sp13_S_contig67755.17699.1 vs. uniprot
Match: A0A835Z9K3_9STRA (Asparaginase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K3_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.930e-21 Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query: 47 KEDNSGGLAPVPGYFTSQMLTMEELMSADDMPFFDIVEYDPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVC 265
++D++G LAP PG+FT ++ +EEL+ A+ MP FD+VEY PLLDSSCF P DW +A DIG AY Y GFVVC
Sbjct: 2 QKDDTGSLAPKPGFFTERIFMLEELVRAE-MPTFDVVEYSPLLDSSCFTPDDWKNVATDIGAAYDRYKGFVVC 73
BLAST of mRNA_Ecto-sp13_S_contig67755.17699.1 vs. uniprot
Match: A0A7S3XTZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTZ4_HETAK) HSP 1 Score: 89.0 bits (219), Expect = 2.180e-19 Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 2
Query: 8 VLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEEL-MSADDMPFFDIVEYDPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVC 265
VLVI TGGT+GM K D +G LAP PG+FT + MEEL + ++ MP I+E+DP+LDSSC P DW IA I Y YD FVVC
Sbjct: 111 VLVIYTGGTIGM-KPDLNGSLAPSPGFFTEYLKNMEELQVGSNSMPKVSIMEFDPILDSSCMGPEDWVHIAEVIEENYLQYDSFVVC 196
BLAST of mRNA_Ecto-sp13_S_contig67755.17699.1 vs. uniprot
Match: A0A7S1MQI3_NEODS (Asparaginase n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1MQI3_NEODS) HSP 1 Score: 84.0 bits (206), Expect = 3.930e-17 Identity = 46/87 (52.87%), Postives = 56/87 (64.37%), Query Frame = 2
Query: 5 TVLVINTGGTLGMRKEDNSGG-LAPVPGYFTSQMLTMEELMSADDMPFFDIVEYDPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVV 262
TVLVI GGT+GM E GG LAP+ GY T QMLTM +L + +PFFD++EYD L+DSS DW + DI R Y YD FV+
Sbjct: 17 TVLVIYNGGTIGMAPEPKLGGELAPMKGYLTHQMLTMSDL-THPSIPFFDVLEYDKLIDSSDMSIEDWGMLLKDIERFYFEYDAFVI 102
BLAST of mRNA_Ecto-sp13_S_contig67755.17699.1 vs. uniprot
Match: A0A1N6E338_9GAMM (Asparaginase n=18 Tax=Salinivibrio TaxID=51366 RepID=A0A1N6E338_9GAMM) HSP 1 Score: 82.0 bits (201), Expect = 1.360e-16 Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 2
Query: 8 VLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELMSADDMPFFDIVEYDPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVV 262
+ + TGGT+GM+K D+ G PV G+ Q+ M E +MP F I EY+PL+DSS P+DW RIA DIG YH YDGFV+
Sbjct: 6 IYIAYTGGTIGMQKSDH--GYVPVSGFLQQQLEKMPEF-HRPEMPLFTIHEYEPLIDSSDMTPTDWQRIADDIGENYHHYDGFVI 87
BLAST of mRNA_Ecto-sp13_S_contig67755.17699.1 vs. uniprot
Match: A0A2N2DT39_9FIRM (Asparaginase n=1 Tax=Firmicutes bacterium HGW-Firmicutes-11 TaxID=2013772 RepID=A0A2N2DT39_9FIRM) HSP 1 Score: 82.0 bits (201), Expect = 1.400e-16 Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 2
Query: 8 VLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELMSADDMPFFDIVEYDPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVV 262
V +INTGGT+ M K +N G APV G F Q L ++ D+MP FD++EYDPLLDSS +W +IA DI + Y YDGFV+
Sbjct: 5 VCIINTGGTISMTKTEN--GYAPVRG-FIEQALCQICALNEDEMPSFDLIEYDPLLDSSSIAVKEWVKIAADIEKRYEDYDGFVI 86
BLAST of mRNA_Ecto-sp13_S_contig67755.17699.1 vs. uniprot
Match: UPI00167A2103 (type I asparaginase n=1 Tax=Bacterioplanes sanyensis TaxID=1249553 RepID=UPI00167A2103) HSP 1 Score: 79.3 bits (194), Expect = 1.350e-15 Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 2
Query: 8 VLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELMSADDMPFFDIVEYDPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVV 262
+ ++ TGGT+GM+ DN GL P GY TS+ L E + + +P +D+VEY+PLLDSS +P W +IA DI + Y YDGF+V
Sbjct: 6 IAILYTGGTIGMQPSDN--GLIPAAGYLTSR-LQQEPRLQSGQVPAYDLVEYEPLLDSSDMEPHHWQQIAEDIAQRYSDYDGFLV 87
BLAST of mRNA_Ecto-sp13_S_contig67755.17699.1 vs. uniprot
Match: A0A451D1I3_9GAMM (Asparaginase n=1 Tax=Candidatus Erwinia haradaeae TaxID=1922217 RepID=A0A451D1I3_9GAMM) HSP 1 Score: 78.6 bits (192), Expect = 2.630e-15 Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 2
Query: 8 VLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELMSADDMPFFDIVEYDPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVV 262
+ V TGGT+GM++ N G PV GY +Q+L E ++MP+F + EY PL+DS+ P+DW IA DI R YH YDGFV+
Sbjct: 6 IYVAYTGGTIGMKQSRN--GFIPVSGYLQNQLLNTLEF-HREEMPYFVLHEYQPLIDSADMTPNDWQSIANDIRRNYHAYDGFVI 87
BLAST of mRNA_Ecto-sp13_S_contig67755.17699.1 vs. uniprot
Match: A0A7J6SZW2_PEROL (Asparaginase n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SZW2_PEROL) HSP 1 Score: 78.6 bits (192), Expect = 3.170e-15 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 2
Query: 8 VLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELMSADDMPFFDIVEYDPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVV 262
VLVI TGGT+GM+ N G L PVPGY T Q+ + EL A MP FD++EY+ L+DSS P++WA++ I Y YDGFV+
Sbjct: 9 VLVIYTGGTIGMKPYAN-GTLHPVPGYLTEQLNNLPELQ-APGMPDFDVIEYENLIDSSDMSPANWAQMTKTIDDHYADYDGFVI 91 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67755.17699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig67755.17699.1 >prot_Ecto-sp13_S_contig67755.17699.1 ID=prot_Ecto-sp13_S_contig67755.17699.1|Name=mRNA_Ecto-sp13_S_contig67755.17699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp VNGASDQHRGYARDEEGRQFGRPGSRAGLLHLPDAHHGGADERGRHAIFRback to top mRNA from alignment at Ecto-sp13_S_contig67755:215..670- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig67755.17699.1 ID=mRNA_Ecto-sp13_S_contig67755.17699.1|Name=mRNA_Ecto-sp13_S_contig67755.17699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=456bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67755:215..670- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig67755:215..670- >mRNA_Ecto-sp13_S_contig67755.17699.1 ID=mRNA_Ecto-sp13_S_contig67755.17699.1|Name=mRNA_Ecto-sp13_S_contig67755.17699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=267bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67755:215..670- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |