mRNA_Ecto-sp13_S_contig6775.17698.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6775.17698.1
Unique NamemRNA_Ecto-sp13_S_contig6775.17698.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6775.17698.1 vs. uniprot
Match: D8LCB2_ECTSI (Phosphopyruvate hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCB2_ECTSI)

HSP 1 Score: 901 bits (2329), Expect = 0.000e+0
Identity = 460/473 (97.25%), Postives = 465/473 (98.31%), Query Frame = 1
Query:    1 VSHASTGLSVSDAFVATPFMGGRVAGAVPVANGMSMSAISKVVGREIIDSRGNPTVEVDMYTEDGMFRASVPSGASTGVYEACELRDGGARYSGKGVLTAVKNVNEVLGPMVVGMDPTEQQALDDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGASTFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHTEKVKIGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTKLTADFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWMA 1419
            V+ A  GLSVSDAFVATPFMGGRVAGA PVANGMSMSAISKVVGREIIDSRGNPTVEVDMYTEDGMFRASVPSGASTGV+EACELRDGGARYSGKGVL AVKNVNEVLGPMVVGMDPTEQQA+DDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGA+TFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHT KV IGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTK+T DFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWMA
Sbjct:    8 VAVAVAGLSVSDAFVATPFMGGRVAGAGPVANGMSMSAISKVVGREIIDSRGNPTVEVDMYTEDGMFRASVPSGASTGVHEACELRDGGARYSGKGVLKAVKNVNEVLGPMVVGMDPTEQQAIDDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGAATFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHTGKVVIGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTKMTEDFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWMA 480          
BLAST of mRNA_Ecto-sp13_S_contig6775.17698.1 vs. uniprot
Match: A0A835YKL7_9STRA (Phosphopyruvate hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKL7_9STRA)

HSP 1 Score: 678 bits (1750), Expect = 6.380e-242
Identity = 351/471 (74.52%), Postives = 399/471 (84.71%), Query Frame = 1
Query:   10 ASTGLSVSDAFVATPFMGGRVAGAV-PVANGMSMSAISKVVGREIIDSRGNPTVEVDMYTEDGMFRASVPSGASTGVYEACELRDGGARYSGKGVLTAVKNVNEVLGPMVVGMDPTEQQALDDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGN-DKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGASTFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHTEKVKIGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTKLTADFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWM 1416
            A  G++  DA V TPF+G +VA A    ++ +SM+ I+K+ GREIIDSRGNPTVEVD+YTEDG+FRASVPSGASTGVYEACELRDGGARY GKGVL A+ NVN V+ P VVGMDPT+Q+ +D+ M K DGT NKTN+GANAILGVSLAAAKAGA +KGVPLYQHFADLAGN +   +PVPAFNVINGGEHAGN LAFQEFM+LPTGAS+F EAMQIG EVYHALKSVIKAKYG DACNVGDEGGFAPNI +NREG ELL+ A +K+GH +KV  GMDVASSEF   D  YDLDFKN +++ G +KLT  +LG++Y +L+ DFPI+SIED FDQDDW  +  FT  V   IQ VGDDLTVTN  RIK AAD+GACNALLLKVNQIGS++ESI AV LAK++GWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKA Y+G+NFRK +WM
Sbjct:   10 AVAGVASVDALVHTPFIGAKVAAATRSSSSALSMATITKIHGREIIDSRGNPTVEVDLYTEDGLFRASVPSGASTGVYEACELRDGGARYGGKGVLKAIDNVNNVIAPKVVGMDPTKQRDIDELMNKLDGTPNKTNLGANAILGVSLAAAKAGAQAKGVPLYQHFADLAGNKEAFVLPVPAFNVINGGEHAGNALAFQEFMVLPTGASSFKEAMQIGTEVYHALKSVIKAKYGQDACNVGDEGGFAPNIGSNREGAELLLEACKKSGHLDKVVFGMDVASSEF-LRDGKYDLDFKNPNSD-GSQKLTGLELGNFYEELSRDFPILSIEDPFDQDDWDSYTAFTPKVGKDIQVVGDDLTVTNPIRIKEAADKGACNALLLKVNQIGSITESIDAVTLAKQSGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKATYAGKNFRKTAWM 478          
BLAST of mRNA_Ecto-sp13_S_contig6775.17698.1 vs. uniprot
Match: A0A4D9CXQ6_9STRA (Phosphopyruvate hydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXQ6_9STRA)

HSP 1 Score: 639 bits (1648), Expect = 1.790e-226
Identity = 321/434 (73.96%), Postives = 367/434 (84.56%), Query Frame = 1
Query:  115 ISKVVGREIIDSRGNPTVEVDMYTEDGMFRASVPSGASTGVYEACELRDGGARYSGKGVLTAVKNVNEVLGPMVVGMDPTEQQALDDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGASTFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHTEKVKIGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTKLTADFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWM 1416
            I  +  REIIDSRGNPTVEVD+ TE G+F+ASVPSGASTG+YEACELRDGG+R+ GKGVLTAV NVN ++ P +VG D T+Q ALD AM+  DGT+NK+ +GANAILGVSLA AKAGAA+KG+PLY++F  LAGN    +PVPAFNVINGG HAGN LAFQEFMILPTGAS+F EAMQIGAEVYH LKSVIK KYG DA NVGDEGGFAPNI+NN+EG ELLM A++ AG+ +KV IGMDVASSEF T D MYDLDFK KD N G  K+T +QLG++Y +L   FPIVSIED FDQDDW  W+ F  +V  ++Q VGDDLTVTN K+I+ AAD+ A NALLLKVNQIGSV+ESIAAVKLAK+NGWG+MTSHRSGETEDNYIADLAVGLC GQIKTGAPCRSERLAKYNQLLRIEEELG  AVY+G+++RKP WM
Sbjct:   42 IKNIHAREIIDSRGNPTVEVDVTTEKGLFKASVPSGASTGIYEACELRDGGSRFMGKGVLTAVNNVNTIIAPKLVGQDETQQNALDQAMIDLDGTENKSKLGANAILGVSLAVAKAGAAAKGMPLYKYFGLLAGNTHFVLPVPAFNVINGGSHAGNKLAFQEFMILPTGASSFKEAMQIGAEVYHNLKSVIKKKYGQDATNVGDEGGFAPNIQNNKEGVELLMDAIKNAGYLDKVVIGMDVASSEFRTKDDMYDLDFKTKD-NDGSSKITGEQLGEFYKELARKFPIVSIEDPFDQDDWDSWVKFNTAVTKELQVVGDDLTVTNPKKIQEAADKSAANALLLKVNQIGSVTESIAAVKLAKKNGWGIMTSHRSGETEDNYIADLAVGLCAGQIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGKSYRKPVWM 474          
BLAST of mRNA_Ecto-sp13_S_contig6775.17698.1 vs. uniprot
Match: A0A835YI39_9STRA (Phosphopyruvate hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI39_9STRA)

HSP 1 Score: 632 bits (1629), Expect = 3.880e-224
Identity = 322/439 (73.35%), Postives = 366/439 (83.37%), Query Frame = 1
Query:  103 SMSAISKVVGREIIDSRGNPTVEVDMYTEDG-MFRASVPSGASTGVYEACELRDGGARYSGKGVLTAVKNVNEVLGPMVVGMDPTEQQALDDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGASTFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHTEKVKIGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTKLTADFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWM 1416
            S + I+ +  R+I DSRGNPTVEVD+  E+G MFRASVPSGASTG+YEACELRDGG  Y GKGV  AV NVN+ + P + GMD T+Q  +DDAM   DGT+NKTN+GANAILGVSLA AKAGAA+KGVPLYQHFADLAG DKL +PVP+FNVINGG HAGN LAFQEFM++P GAS+F EAMQIG+E YH L  VIKA+YG DACNVGDEGGFAPNI+NNREG ELLM A+ KAGHT+KV I MDVA+SEF+  D  YDLDFKN+ +  G   ++ + LGD + +L+ DFPI SIED FDQDDW  WI FT     K+Q VGDDLTVTNIKRIK AAD  AC+ALLLKVNQIGSVSESIAAVKLAK++GWGVM SHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVY+G +++KP+WM
Sbjct:    3 SATTITAIKARQIFDSRGNPTVEVDLTVENGAMFRASVPSGASTGIYEACELRDGGKAYMGKGVTKAVGNVNDTIAPAICGMDCTKQLEIDDAMRALDGTENKTNLGANAILGVSLAVAKAGAAAKGVPLYQHFADLAGCDKLVLPVPSFNVINGGSHAGNRLAFQEFMMMPVGASSFKEAMQIGSECYHHLHKVIKARYGQDACNVGDEGGFAPNIQNNREGVELLMDAIAKAGHTDKVVISMDVAASEFY-KDGKYDLDFKNESSG-GASVMSGEDLGDMFYQLSQDFPIESIEDPFDQDDWDSWIKFTAKCAGKVQVVGDDLTVTNIKRIKDAADRKACSALLLKVNQIGSVSESIAAVKLAKQSGWGVMCSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYAGASYKKPAWM 439          
BLAST of mRNA_Ecto-sp13_S_contig6775.17698.1 vs. uniprot
Match: A0A7S2XXL5_9STRA (Phosphopyruvate hydratase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXL5_9STRA)

HSP 1 Score: 630 bits (1625), Expect = 6.030e-223
Identity = 315/441 (71.43%), Postives = 368/441 (83.45%), Query Frame = 1
Query:   94 NGMSMSAISKVVGREIIDSRGNPTVEVDMYTEDGMFRASVPSGASTGVYEACELRDGGARYSGKGVLTAVKNVNEVLGPMVVGMDPTEQQALDDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGASTFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHTEKVKIGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTKLTADFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWM 1416
            +GM+MSAI  V GREIIDSRG PTVEVD+ TEDG+FRASVPSGASTG+YEACELRDGG RYSGKGVLTAVKNVNEVLGP +VGMD  +Q+ +D+AM   DGT NKTN+GANAILG+SLA +KAGAA+  +PLYQHFA++AGND+L MPVP+ NVINGG HAGN LAFQEFM+LPTGA +F+E+M IG E+YHALK +IK KYG DA NVGDEGGFAPNI++NREG ELLM A EK+G  +K+ +GMDVASSEF   D  YDLDFKN D + G  +L+ + LG++Y +L  DFPI SIED FDQDDW  +   T  +  ++Q VGDDLTVTN  +I  A ++GACNALLLKVNQIGS++E+I AVKLAK+NGWG+MTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELG    Y+G++FR P WM
Sbjct:   37 SGMTMSAIKSVKGREIIDSRGFPTVEVDITTEDGLFRASVPSGASTGIYEACELRDGGKRYSGKGVLTAVKNVNEVLGPKLVGMDVADQKGIDEAMNTIDGTPNKTNLGANAILGISLATSKAGAAACKIPLYQHFANIAGNDQLVMPVPSLNVINGGSHAGNKLAFQEFMVLPTGAESFSESMLIGCEIYHALKGIIKKKYGQDATNVGDEGGFAPNIQSNREGVELLMEACEKSGWADKIILGMDVASSEFLKEDGTYDLDFKN-DASDGSMRLSGEALGEFYQELCRDFPIKSIEDPFDQDDWDSYAKLTPKIGKEVQIVGDDLTVTNPIKIAEAVEKGACNALLLKVNQIGSITEAINAVKLAKQNGWGIMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSGVKYAGKDFRTPGWM 476          
BLAST of mRNA_Ecto-sp13_S_contig6775.17698.1 vs. uniprot
Match: D7FYQ9_ECTSI (Phosphopyruvate hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ9_ECTSI)

HSP 1 Score: 627 bits (1618), Expect = 3.150e-222
Identity = 317/438 (72.37%), Postives = 364/438 (83.11%), Query Frame = 1
Query:  103 SMSAISKVVGREIIDSRGNPTVEVDMYTEDGMFRASVPSGASTGVYEACELRDGGARYSGKGVLTAVKNVNEVLGPMVVGMDPTEQQALDDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGASTFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHTEKVKIGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTKLTADFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWM 1416
            +MSAI+ V GR IIDSRGNPTVEVD+ T++G+FRASVPSGASTGV+EA ELRDGG+ Y GKGV  AV+NVN+ +GP ++G+D T+Q+ +D  M++ DGT NK N+GANAILG SLA +KAGA SK VPLYQH+ADLAGN  L +PVP+FNVINGGEHAGN LAFQEFMILPTGA TF EAM IG EVYH LKSVIK KYG DACNVGDEGGFAPNI++N EG ELLM A++KAG+ +KV +GMDVASSEF   D  YDLDFKNK    GD++LT ++LG  Y  L A +PIVSIED FDQDDWA +  FT +V D +Q VGDDL VTN  RI  A ++ ACNALLLKVNQIGSV+ESI AV ++K+ GWGVMTSHRSGETEDNYIAD+AVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELG KAVY+GQNFR PSWM
Sbjct:   20 NMSAITAVNGRYIIDSRGNPTVEVDVSTKEGLFRASVPSGASTGVHEAVELRDGGSLYMGKGVSKAVENVNKTIGPALIGLDATDQEGIDAKMIELDGTPNKGNLGANAILGASLAVSKAGAGSKAVPLYQHYADLAGNSDLVLPVPSFNVINGGEHAGNKLAFQEFMILPTGAETFTEAMSIGCEVYHELKSVIKGKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKG---GDQQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDAVQVVGDDLLVTNPSRITEAGEKKACNALLLKVNQIGSVTESIKAVTMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKAVYAGQNFRTPSWM 454          
BLAST of mRNA_Ecto-sp13_S_contig6775.17698.1 vs. uniprot
Match: A0A6U4G212_9STRA (Phosphopyruvate hydratase n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4G212_9STRA)

HSP 1 Score: 627 bits (1618), Expect = 1.080e-221
Identity = 323/462 (69.91%), Postives = 371/462 (80.30%), Query Frame = 1
Query:   49 TPFMGGRVAGAVPVA------NGMSMSAISKVVGREIIDSRGNPTVEVDMYTEDGMFRASVPSGASTGVYEACELRDGGARYSGKGVLTAVKNVNEVLGPMVVGMDPTEQQALDDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGASTFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHTEKVKIGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTKLTADFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWM 1416
            TPF GGR A  V +       +  + S ++ VV REI+DSRGNPTVEVD+ T+DG F ASVPSGASTG YEACELRDGG RY GKG L AV NV + + P ++GMD T Q  +D  M+  DGTDNK N+GANAILGVSLA AKAGAA+ GVPLY+HFA+LAGNDKL +PVP+FNVINGG HAGN LAFQEFM+LPTGA +F+EAMQIG EVYHAL+ VIK KYG DA NVGDEGGFAP I++NREG ELLM A++  G+T+KV IGMDVASSEF+T D  YDLDFK  D N G  KLT + LGD+Y +L  DFPI SIED F++DDW  +  FT +V   IQ VGDDLTVTN  RI+ A D+GACNALLLKVNQIGS++ESI AVKLAK+NGWG+M SHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELG+ A Y+G N+RKP+WM
Sbjct:   29 TPF-GGRTANRVAMQMATKAPDATATSTVTDVVAREILDSRGNPTVEVDITTKDGKFTASVPSGASTGAYEACELRDGGERYGGKGTLQAVSNVVDKIKPAILGMDVTAQSDIDQVMIDLDGTDNKANLGANAILGVSLAVAKAGAAASGVPLYKHFANLAGNDKLTLPVPSFNVINGGSHAGNKLAFQEFMLLPTGAKSFSEAMQIGTEVYHALRGVIKKKYGIDATNVGDEGGFAPAIQSNREGVELLMEALKITGYTDKVVIGMDVASSEFYTEDGQYDLDFKTPD-NDGSMKLTGEALGDFYKELAKDFPIQSIEDPFNEDDWDSYSPFTAAVGKDIQVVGDDLTVTNPVRIQEAVDKGACNALLLKVNQIGSITESINAVKLAKQNGWGIMCSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGEGAEYAGLNYRKPAWM 488          
BLAST of mRNA_Ecto-sp13_S_contig6775.17698.1 vs. uniprot
Match: A0A7S1U2I2_9STRA (Phosphopyruvate hydratase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2I2_9STRA)

HSP 1 Score: 625 bits (1612), Expect = 2.070e-221
Identity = 313/436 (71.79%), Postives = 360/436 (82.57%), Query Frame = 1
Query:  109 SAISKVVGREIIDSRGNPTVEVDMYTEDGMFRASVPSGASTGVYEACELRDGGARYSGKGVLTAVKNVNEVLGPMVVGMDPTEQQALDDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGASTFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHTEKVKIGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTKLTADFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWM 1416
            S ++ VV REI+DSRGNPTVEVD+ T+DG F ASVPSGASTG YEACELRDGG RY GKG L AV NV + + P ++GMD T Q  +D  M+  DGTDNK N+GANAILGVSLA AKAGAA+ GVPLY+HFA+LAGNDKL +PVP+FNVINGG HAGN LAFQEFM+LPTGA +F+EAMQIG EVYHAL+ VIK KYG DA NVGDEGGFAP I++N EG ELLM ++ KAG+T KV+IGMDVASSEFHT D  YDLDFK KD N G E +T +QLGD Y  L   FPI+SIED FD+DDW  +  FT ++ D++Q VGDDL VTN+ +I  AA++ ACNALLLKVNQIGSV+ESI AVK++K NGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAK NQLLRIEEELG+ A Y+G N+RKP+WM
Sbjct:   14 STVTDVVAREILDSRGNPTVEVDITTKDGKFTASVPSGASTGAYEACELRDGGERYGGKGTLQAVSNVVDKIKPAILGMDVTAQSDIDQVMIDLDGTDNKANLGANAILGVSLAVAKAGAAASGVPLYKHFANLAGNDKLTLPVPSFNVINGGSHAGNKLAFQEFMLLPTGAKSFSEAMQIGTEVYHALRGVIKKKYGIDATNVGDEGGFAPGIQSNVEGVELLMESIAKAGYTGKVQIGMDVASSEFHTPDGRYDLDFKTKD-NDGSEVITGEQLGDLYKDLCNQFPIISIEDPFDEDDWDNYSPFTAAIGDRVQVVGDDLLVTNVTKIAEAAEKKACNALLLKVNQIGSVTESIEAVKMSKRNGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKLNQLLRIEEELGEGAEYAGLNYRKPAWM 448          
BLAST of mRNA_Ecto-sp13_S_contig6775.17698.1 vs. uniprot
Match: A0A6V3CYS5_HETAK (Phosphopyruvate hydratase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3CYS5_HETAK)

HSP 1 Score: 621 bits (1602), Expect = 4.440e-220
Identity = 310/437 (70.94%), Postives = 360/437 (82.38%), Query Frame = 1
Query:  106 MSAISKVVGREIIDSRGNPTVEVDMYTEDGMFRASVPSGASTGVYEACELRDGGARYSGKGVLTAVKNVNEVLGPMVVGMDPTEQQALDDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGASTFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHTEKVKIGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTKLTADFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWM 1416
            MS I  + GREIIDSRGNPTVEVD++T++GMFRASVPSGASTG+YEACELRDGG RY GKGVL AV NV+ ++   ++G DPT+Q+ +D  ML  DGT NKT +GANAILGVSLA +KAGAA+KGVPLYQH+ADLAGN +L +PVP+FNVINGG HAGN LAFQEFM+LPTGA+TF+EAMQIG E+YH LK VIK +YG DA NVGDEGGFAPNI++NREG ELLM A  + GH +K+  GMDVA+SEF T D  YDLDFK KD N G +K+T  +L   Y  L A+FPIVSIED FDQDDW  +   T  +    Q VGDDL VTN +RI+ A+++ ACNALLLKVNQIGSV+E+I AVK+AK+NGWGVMTSHRSGETED YIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELG +AVY+GQ FR P+WM
Sbjct:    1 MSTIRHIKGREIIDSRGNPTVEVDIFTDNGMFRASVPSGASTGIYEACELRDGGDRYMGKGVLQAVNNVDTLIKDALIGKDPTQQREIDQIMLDLDGTKNKTKLGANAILGVSLAVSKAGAAAKGVPLYQHYADLAGNTQLVLPVPSFNVINGGSHAGNKLAFQEFMVLPTGAATFSEAMQIGCEMYHTLKKVIKERYGQDATNVGDEGGFAPNIQSNREGVELLMEARSRCGHGDKIVFGMDVAASEFWTEDKKYDLDFKTKD-NDGSQKITGAELAQMYKDLAAEFPIVSIEDPFDQDDWEAYTAMTADMGTDCQVVGDDLLVTNPERIQMASEKSACNALLLKVNQIGSVTEAIDAVKMAKQNGWGVMTSHRSGETEDCYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSRAVYAGQTFRAPAWM 436          
BLAST of mRNA_Ecto-sp13_S_contig6775.17698.1 vs. uniprot
Match: A0A7R9YBD1_9STRA (Phosphopyruvate hydratase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBD1_9STRA)

HSP 1 Score: 622 bits (1604), Expect = 8.120e-220
Identity = 318/448 (70.98%), Postives = 366/448 (81.70%), Query Frame = 1
Query:   76 GAVPVANGMSMSAISKVVGREIIDSRGNPTVEVDMYTEDGMFRASVPSGASTGVYEACELRDGGARYSGKGVLTAVKNVNEVLGPMVVGMDPTEQQALDDAMLKEDGTDNKTNMGANAILGVSLAAAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQEFMILPTGASTFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNIKNNREGCELLMTAMEKAGHTEKVKIGMDVASSEFHTSDSMYDLDFKNKDTNTGDEKLTAKQLGDYYTKLTADFPIVSIEDAFDQDDWAGWIDFTGSVEDKIQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKENGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYSGQNFRKPSWMA 1419
            GA P  NG +M+ +  V  REIIDSRGNPTVEVD+ TEDGMFRASVPSGASTG+YEA ELRDGG RY GKGV  AV++VN  +   ++G DPT+Q  LDD M+  DGT+NK  +GANAILG SLA +KAGAA+KGVPLYQHFADLAGN  L +PVP+FNVINGG HAGN LAFQEFMILPTGA +F+EAMQ+G EVYH LK VIKAKYG DA NVGDEGGFAP I++N EG +LLM ++ KAG++  V+IGMDVASSEF T D  YDLDFK +  N G E +T +QLG+ Y  L + FPIVSIED FDQDDW  ++ FT ++  K+Q VGDDL VTN+KRI+ AAD+ ACNALLLKVNQIGSVSESI AVK++K+NGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAK NQLLRIEEELG  A Y+G++FR P WMA
Sbjct:   29 GAAP--NGRTMATVQAVKAREIIDSRGNPTVEVDVTTEDGMFRASVPSGASTGIYEAVELRDGGKRYLGKGVTKAVQSVNTEIQDALLGKDPTQQAELDDIMISLDGTENKARLGANAILGASLALSKAGAAAKGVPLYQHFADLAGNSSLMLPVPSFNVINGGSHAGNKLAFQEFMILPTGAKSFSEAMQMGCEVYHTLKGVIKAKYGQDATNVGDEGGFAPGIQSNIEGVDLLMESISKAGYSGLVEIGMDVASSEFLTKDGRYDLDFKTQ-PNDGAEVITGEQLGELYKDLCSQFPIVSIEDPFDQDDWDNYVPFTEAIGSKVQVVGDDLLVTNVKRIQEAADKKACNALLLKVNQIGSVSESINAVKMSKQNGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKLNQLLRIEEELGSAAEYAGKDFRAPKWMA 473          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6775.17698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCB2_ECTSI0.000e+097.25Phosphopyruvate hydratase n=2 Tax=Ectocarpus TaxID... [more]
A0A835YKL7_9STRA6.380e-24274.52Phosphopyruvate hydratase n=1 Tax=Tribonema minus ... [more]
A0A4D9CXQ6_9STRA1.790e-22673.96Phosphopyruvate hydratase n=2 Tax=Monodopsidaceae ... [more]
A0A835YI39_9STRA3.880e-22473.35Phosphopyruvate hydratase n=1 Tax=Tribonema minus ... [more]
A0A7S2XXL5_9STRA6.030e-22371.43Phosphopyruvate hydratase n=1 Tax=Fibrocapsa japon... [more]
D7FYQ9_ECTSI3.150e-22272.37Phosphopyruvate hydratase n=1 Tax=Ectocarpus silic... [more]
A0A6U4G212_9STRA1.080e-22169.91Phosphopyruvate hydratase n=3 Tax=Phaeomonas parva... [more]
A0A7S1U2I2_9STRA2.070e-22171.79Phosphopyruvate hydratase n=1 Tax=Phaeomonas parva... [more]
A0A6V3CYS5_HETAK4.440e-22070.94Phosphopyruvate hydratase n=2 Tax=Heterosigma akas... [more]
A0A7R9YBD1_9STRA8.120e-22070.98Phosphopyruvate hydratase n=1 Tax=Pinguiococcus py... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6775contigEcto-sp13_S_contig6775:73..7875 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score903.3
Seed ortholog evalue4.9e-260
Seed eggNOG ortholog2880.D8LCB2
Preferred nameENO1
Model size1422
KEGG rclassRC00349
KEGG koko:K01689
KEGG ReactionR00658
KEGG Pathwayko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066
KEGG ModuleM00001,M00002,M00003,M00346,M00394
Hectar predicted targeting categoryother localisation
Exons11
EggNOG free text desc.phosphopyruvate hydratase activity
EggNOG OGsCOG0148@1,KOG2670@2759
Ec32 ortholog descriptionEnolase
Ec32 orthologEc-14_005400.1
EC4.2.1.11
Cds size1422
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6775.17698.1prot_Ecto-sp13_S_contig6775.17698.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6775 73..7875 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463931.037913-CDS-Ecto-sp13_S_contig6775:72..1801681463931.037913-CDS-Ecto-sp13_S_contig6775:72..180Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6775 73..180 +
1681463931.0526774-CDS-Ecto-sp13_S_contig6775:1006..11411681463931.0526774-CDS-Ecto-sp13_S_contig6775:1006..1141Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6775 1007..1141 +
1681463931.0639145-CDS-Ecto-sp13_S_contig6775:2045..21771681463931.0639145-CDS-Ecto-sp13_S_contig6775:2045..2177Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6775 2046..2177 +
1681463931.0744522-CDS-Ecto-sp13_S_contig6775:3007..31271681463931.0744522-CDS-Ecto-sp13_S_contig6775:3007..3127Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6775 3008..3127 +
1681463931.0899575-CDS-Ecto-sp13_S_contig6775:3546..37111681463931.0899575-CDS-Ecto-sp13_S_contig6775:3546..3711Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6775 3547..3711 +
1681463931.1044302-CDS-Ecto-sp13_S_contig6775:4155..43111681463931.1044302-CDS-Ecto-sp13_S_contig6775:4155..4311Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6775 4156..4311 +
1681463931.1172433-CDS-Ecto-sp13_S_contig6775:4756..48281681463931.1172433-CDS-Ecto-sp13_S_contig6775:4756..4828Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6775 4757..4828 +
1681463931.1284041-CDS-Ecto-sp13_S_contig6775:5491..56051681463931.1284041-CDS-Ecto-sp13_S_contig6775:5491..5605Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6775 5492..5605 +
1681463931.139268-CDS-Ecto-sp13_S_contig6775:6090..62311681463931.139268-CDS-Ecto-sp13_S_contig6775:6090..6231Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6775 6091..6231 +
1681463931.1494625-CDS-Ecto-sp13_S_contig6775:6928..71261681463931.1494625-CDS-Ecto-sp13_S_contig6775:6928..7126Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6775 6929..7126 +
1681463931.161754-CDS-Ecto-sp13_S_contig6775:7794..78751681463931.161754-CDS-Ecto-sp13_S_contig6775:7794..7875Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6775 7795..7875 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6775.17698.1

>prot_Ecto-sp13_S_contig6775.17698.1 ID=prot_Ecto-sp13_S_contig6775.17698.1|Name=mRNA_Ecto-sp13_S_contig6775.17698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=474bp
VSHASTGLSVSDAFVATPFMGGRVAGAVPVANGMSMSAISKVVGREIIDS
RGNPTVEVDMYTEDGMFRASVPSGASTGVYEACELRDGGARYSGKGVLTA
VKNVNEVLGPMVVGMDPTEQQALDDAMLKEDGTDNKTNMGANAILGVSLA
AAKAGAASKGVPLYQHFADLAGNDKLEMPVPAFNVINGGEHAGNGLAFQE
FMILPTGASTFAEAMQIGAEVYHALKSVIKAKYGTDACNVGDEGGFAPNI
KNNREGCELLMTAMEKAGHTEKVKIGMDVASSEFHTSDSMYDLDFKNKDT
NTGDEKLTAKQLGDYYTKLTADFPIVSIEDAFDQDDWAGWIDFTGSVEDK
IQTVGDDLTVTNIKRIKRAADEGACNALLLKVNQIGSVSESIAAVKLAKE
NGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLR
IEEELGDKAVYSGQNFRKPSWMA*
back to top

mRNA from alignment at Ecto-sp13_S_contig6775:73..7875+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6775.17698.1 ID=mRNA_Ecto-sp13_S_contig6775.17698.1|Name=mRNA_Ecto-sp13_S_contig6775.17698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7803bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6775:73..7875+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTCTCGCATGCTTCGACAGGACTCAGCGTATCTGATGCCTTCGTAGCCAC GCCCTTCATGGGTGGTCGTGTAGCCGGGGCCGTTCCCGTCGCCAACGGCA TGTCTATGGTGAGAAGAGACCATCAGCAGGCACCAAGAGGCACTCTCATG TTTTGCCCTTCTTCGTAGACTTCGTGCGATCGTGATGCAATACACCACGT TTGTCCAACGCTAACGCGGATCATCCACTGCTATGCGCGTGAACATTACT TTCAGAGCGTCAAGTACGCCCGTCAAGACTTAAATCCACCTACACGTAAG GCCGGATCGAACCAGTCGACGAGGAGCTTTGCCTTTAGCCACGTGGTTCC CGCCGTCATGTAAAACATGAGGCAATAGATTGCCGAATGAAAGGAGTGAA ATGTGCATCCAATGTTCCCCATGTTGAACATGACATTTTCGACTTATTCT TCATACTAATGGTACTATTGTTACGCGAGCCCAGCTCTTGATTGTGTGGA GACAGAAAGCTCGGCCCCAACAGGAGGGCCGAGATCGATAACCCTCTTGT TTTCGGACTGACGAGGAAGCTGGGTTGTGGCGTTCACTACCCACGCGATA GGAGCGCTTCGCCACATCATCCTTCCGTCACGCCTTCATGGCGGCGGCTT CTGTACTTGTACCCCCCCTTGAAACATGAACGAGACTTCTCGGAATTCAA ATGTAGACTGACCACATCAAACAATTTTCGTGAAAGAATGACCGCCACGG GCGTCACCTAACAAAGTTAGTCCTCCCGTCCATGTTGTAGTCGAGGAGAA GAAACCAACGAATAGCAAAGCCCACAACACTGCTGTGCAGATGGACGCAC GCCCGGGTGCTCGAGATGTTCTTGGCCACGCGACTCCACACAGCACTGAC CCATCCATCCATTCTGACCGGCATGAAAACACAGTCGGCCATCTCGAAGG TGGTGGGGCGCGAGATCATCGACTCCCGCGGGAACCCCACGGTGGAGGTG GACATGTACACGGAGGACGGCATGTTCAGGGCCTCGGTGCCCAGCGGCGC CTCTACGGGCGTGTACGAGGTCAGCAGCGTGTCTAATGGGTAAAATAGCC GCGTTGCCTCCCGCTTTGTACGGGAAGGTAGATCCATTGCTTTTCTATCC CGAACTCTTGTTGCCTGTGGAAGAGATGAGAATTGCTGTGTTGTTATTTG TAATGATACGTCAATGGGTCTCATCAACCATACTGCGCGACAACGTCGGG TTGATCTGTTCCTTGCGTTGCCCATGCCCTCAATACCGAAGTGTTGAAGC TTTTTACATCCGCCCCTTGGCTCCACACATTTTAAGTCAATTTTGGTTGA GCCACCATCCCCAGAGAGAGCAAAAGAGAAGCTAGCAGCAGCCTGAGAAA CATGCGGTACAAAGACTGGAATGCACGACCCATCTTGAGACCAAGTACTG GCATTTCAAGCGCCCGCCGACCTGGAGCATCAGGCAGATGAGCTTTGCAT CCGGGGCGGCCTTCCGCTGCTTCCGGAACTCCAAGACTCGACAAGTTGAC GTTGAACAAATTTTGCGAAGCCACCTGCGTGTGAGAACAGGTAGGGCATT TGAAACAAGGTGACAAGTGCTTCAAGCAGCAAACAAAAATACAACAATCA TGGTCAACAAAAGCCTGATGACCCTGGGCACACAAGACCCAAGCAACACT TCAGCCCTGTCTGCAGCATTCCATCGAATGGGGTGCAAGTCCCCTAGTAC GGTCCCCTTAATACTATAATAGTATATCACCGGCACGGGCAATGGCTGCA CAAACTCACTTGACCTCGCTTGCTTGAGCACGTACGGCCGCAGCTGTTTT TTTTGTGGCACACTGTTAAATCAGTACAGAAAAGTGAAGGTACTGGATAG AGAGATGGGAACTGTTTGAAATGTAAAGGCAACAACAGCACTACAACCGC TCCCTGGCCACTGTGCGCCCCAGGCGTGCGAGCTCCGTGACGGCGGTGCC CGCTACAGCGGCAAGGGCGTACTGACGGCCGTCAAGAACGTCAACGAGGT CCTCGGCCCCATGGTGGTCGGGATGGACCCCACCGAACAGCAGGCGCTCG ACGACGTGAGTAGACGGCGGCCGGAGAGGGTGGAATCGGCACAAATTTGT CTGCTCGAAAGGAGGAGCCAATTGTTTTTAGCTACCTCTATCATAACGAT CGTTTTTTTTACGTGTAGTCGCCTCTGCTTGACAGGATGGCTCTGTTGCG TGAGTGGTGGTTCTGGCTACCTCGCGGTACTAGTTAGCACATGATCAGGG TCAGTTTTTTTGTTTTTTCTCCCATCATTGGACTCTGTCGTCTACCCCTC TGGCCCCCATCCTCCACTTCTACTCGCTAGACGACCCAACCGGGGTCACA TATGCACAGGAGGGGGGGATTGCACCCCCTGCTGCGGTTCCTGCCTGAGA TATCTTTATCGCGAGAAGGGTACAGCAATCCCTTCCCTCGCGACTTATGA AGTCGGTTTGTCTTGATAGGACCGGTTTATTCGGCCCGGGAAGTATCAAC CCCACCCTTAATTTTCATGTGGTGGATGGTTCCACAACCTTTTGAACAGG TAACCAACGCAGACTGCGTGTTCTGCCTTTTTTCAACCCGCCCCATCTTT CAGCCTCCACATCTGCCTCATGTGTGTACGCGTCCGTGTCTTTGTTTTCC TGGTATTAAATGGGGTTTACCACAAAATACGTAAAACATGCCGTTTCTGC TGTCTTTGCGGGCCTGTCTTTCTCCCACTAGTCCTCAACAAACAATCCGT CAGCCACCCCTACACGCCGAAACTCGGTAAGTGGGCCAGGACAATCTTCT CAACCCCTGTTCGTTTCACACCCCTCCTCCTCCTCCTCCTCCTCTGCTGC AAACGGCTCGTGCCATTGCGCTCCGTCCTGGTCAGGCGATGCTCAAGGAG GACGGGACGGACAACAAGACCAACATGGGCGCCAACGCCATCCTCGGCGT GTCTCTGGCGGCGGCTAAGGCCGGGGCGGCATCGAAGGGCGTCCCTCTCT ACCAGGTGTGCTAGTTGTGAGATTCAAGATTTGATGTTTCTCCCATCTTG ATAGATGCCACGCACGGTGGTGTTTGTAGGGCATGCCCGTATGGGTACCT GGGTAGTACGGTAAGTTTCGAATCCCTCCGTGATTAACGATTCTAGTCTC GACTCGTTTGGATCCAGCCGATCGAACCACGATTTTCTTGAAATGATTCG ACGTCACTTTCCTTCTGTTGGAGTCTTGCCTGTTCCGTCATGTAAATAGC TTGATGGTTATCGTTTGCAGTGATATTCGTTCTCGTTTGTCCTCCGTGTT GTTTGTTCTTTCGAGCATACATTGCGCAGACAAGAGTCGACACCTGTTCG TCATGCAGTTTCGTTGTCGCCGTCTGAAGCTCTCTTTTTCTTTCGTCGAT CCACACACCCGCGGCATCTTTCAGCACTTCGCCGACCTGGCCGGCAATGA CAAGCTCGAGATGCCGGTGCCCGCCTTCAACGTCATCAACGGCGGGGAGC ACGCCGGAAACGGTCTGGCCTTCCAGGAGTTTATGATCCTCCCCACGGGC GCGTCGACCTTTGCCGAGGCCATGCAGATCGGCGCCGAGGTGTGTATGGT ATGGCACGGTACGGTATGGGTCGTGCCTTGAGGTTTGGTGGGAATCCTGC TACGCCCGTGGTGCTGCCGGACCTGTTTTACCGTGTACATTGCGGTTGTC GAACTAAAGTGGCATCAACGGCTTAACCACATGGGTCGGTGATGCGGAAT GGGTGTCGTGTGGCGCAACATTGTCGCGCATGCCTCCGCGGGCCAACCCA CCTCGTTAAGGATTCTTGGTACGAACAAAACGGAGTTCTCCAACGCGGAG TTCACTTTCATCCCTCTGGCTTGTGGTGGAGGCGAATTCCAATCCCGGGG ACTCGGTGCTACGACGAACGAGGCGATAGTGTGTCTTTGGATGCAGAACC GTCGCATTTTTGTTTTTTTCATCGTTTTCCCTTGCTCTTGTCTGCCGCTT TCGTAACTCTGATGTGCATGGCGCGAAATGTAGGTGTACCACGCCCTCAA GTCCGTCATCAAGGCCAAGTACGGCACCGACGCGTGCAACGTGGGCGACG AGGGCGGTTTCGCGCCCAACATCAAGAACAACCGTGAGGGGTGCGAGCTG CTTATGACGGCTATGGAGAAGGCGGGGCACACCGAGAAGGTGCCACATGG AACCAAAACACAAGATAGCCAGAGACGTTTTTTGGGGGGCAGTGATTTGA ATGAGATGATTGGTCGGAGCCCGCAATATTTTTGTCGTCACCGTCTGAAA TATGAGTAAGTATAGCCCGACGAACTTTTGGTTGGTTGGTTGGTTTGTTT CCGTTATGCACCCTCGTGACAATGTGTTCGACTTGATCACGGCTGATTCG CGTTGATGATGTCACCGATGTCAAAACTTTCGCGTCACGACTGCATAGAA CATCGCCAAACGCCACGAGGTTGCCTTCCATCATTACCCATCAGTACCCA TCTACACCCTCGCTTCTCCAGCATCGTATCCGGGGAGCCCATCCTTGTGG GGTCAGGCTCTTTTTACACAAAACGCCTTTCTCCGCCGGGTCTTCTTAAT CGCGAAAATAATATACACTGTGGGCGAATAACAGGTGAAGATCGGCATGG ACGTGGCCTCGTCGGAGTTCCACACGAGCGACAGCATGTACGACCTCGAC TTCAAGGTGTGTTGGGTTGTCACGGTACTGCTGCACGTATGTTGCCTTGC ATATGTTACGTGGTATCCGTGTCCTGGGCATGGAGAGAGAAGGGGGTGAG GGTACAAAAGCTCAGATTGATCGAACGCGAAGGTGTTGAATTACTGTACT TTTTGCCTGTGCGAGTCAATTTGACCGTCCCGGTTGCACTTTGCGGGAGA GCTATTGCATGCTATGCTATGGTTTATTTGTTTTTTGCTGTGGTGACAGA TGTGCATACGCCAGTCGTCCCGGTTCAACTGCACCCCTGCCTCTAGAGAG TAATTCTGGAGTTGAAAATTCGTGACGTCCTTGGCAAACACCAAAAGTGA GGCAAAGAACCCCTCAACCCTGCTTCATCGCGATGAAACTGAGGGTCGAG CACCGCAGGGGAATGTGGTGAAAGAAACGATACAATGTTCCAGTGTTGGC CTTCGTCCTGCGTGACCCCGGCTGGTGTAGGAAAACATGATGCGAAGTAC ACACGGACTGGCGTACAATAGACTGGCGCCGGAATAGAGATGAATCGACG CCCACCATTTTGTCGCACTTTCTTTTTTTCTTTTTTTTACCCCGGTTTCT GTACCTGCCATCACACGAAGCACTTTTCTCTGCCCCCTGATTCCGCCCTC TCCTTATGTATGTTCGTAGAACAAGGACACCAACACGGGCGATGAAAAGC TGACCGCCAAACAGCTGGGAGACTACTACACCAAATTAACCGCGGACTTC CCGATCGTGTCCATCGAAGACGCGTTTGACCAGGTTCGACTATTTTCTTT CTTTTTTTTGTTCAACGTAAGATCCAAGATGCAACGTCTTGAAGATGACG TTGCGTAGGAATTGTGTTGCTGTTGGTGGTCGCGATGTCGTCGTCGTGGT CAGCCTTGACTTTTTTGGTTGTAGAAAACGTTGCCTACTTAACATGATCC TTTGACCACGCTTGACGTGTCTGCTTCCTTTACTTCGTGGATTGCAACCT CCGAATGTTGCTACTGTGAATGAATCTGACTCACCCGTCGTTTCATCCAG CATTAAGCATGCTTCTCCTGTTTCTTTTTGTGGTGTTTTTTTTTCTGTTG CTGTGACCGTTTTTTTTCTTTTTCGTTTTTCGTTATTGGAATGCGCTGCC TATGACTCACCTCCCCCCACTATCTCCCTCCGGCTAGCAATCGCTGCTTC CTTCTTCCTTTCTCGGAAACCAAAGAAACGATCTCTTTTATGTTTTTCGC TTTTTTCTCGTCTCGAAGGACGACTGGGCAGGGTGGATCGACTTCACGGG TAGCGTGGAGGACAAGATCCAGACTGTGGGTGACGACTTGACGGTGACGA ACATCAAGCGGATCAAGAGGGCCGCTGACGAGGGTGCCTGCAACGCCCTC CTCCTCAAGGTACTGCCTGGAACGCGTAAACCATTGCATTGCAATATTGT TTTCGCTGATTTGGCGTTATGGCCGTTTGTTGTCGCTGTTCTCGGTTGAT GCCGATGCTTGCTACATGTCTACCGTGTTTGCTTAAGAATGGTGGAAAAT CGCAGAAAGTATGAACCCTTTTCACCGCTGTAGGGCGGTTTGTGTGGCTA CTTTTCCGATGGTCGATTAAAAGGTTGGCAGGGAGCGTGCACGGCGTCGA CATTGACCGCTAAACTGGTACAGAGATGTCGTGTTTGTTGACAATATCGG CGGAAATGTTTGGCATGGTCGTGACGCTAGTGTTGAGTGGGCACATTGGT GTGCTCGACCGGATGCTCGAGGGGACATGGGACGTACGCGAGACGCAAGG AAGCATAGCCACAGTGTTACGTAGATTGTGTGCAGGCCTAGTTGTCCCTT TCTTGCACTGGGCGACATGGCCCGCTTTCACAGGGCGAATTTCGCCGGGT CACAGTCTCTCGTGAACCGCCACAGCAAACGAGTACCTGATACCCGTCCT CCGCTCCCACCTCCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACCTCT TTTTCTCTGGTTCCCCATCTCGTTCCCCGTCTCATTCTCTCGCTATCCCC GCGTGTTTTCGTCCTCGCTCCGAACCTCCGTCGCCGTTCCCGTACCCGCA CAACAGGTGAACCAGATCGGATCCGTGTCCGAGTCTATCGCTGCCGTCAA GCTTGCCAAGGAGAACGGCTGGGGGGTGATGACCTCGCACCGGTCCGGGG AGACGGAGGACAACTACATCGCCGACCTGGCGGTGGGCCTGTGCACTGGT CAGATCAAGACGGGGGCCCCTTGCCGGTCGGAGCGCCTCGCCAAGTACAA CCAGGTTTGTTTTGGTTGCGGTTAGTAGTGGTAAACAAATGTAGTGTTGG CAATGTTTGAGCCCAGCCAAGCACAACCAGATTGGTTGCTGTTGTCGGTG TTTGTGGTCGTGGGGTGGTTGTGGTAGTGCTGACTGTGTTGTTATCCAAG CAAAGTGCAAGCAGGTTGATTGCTGTTGGGGATGTTTGGTGGTGGTGATG CTGACTATTTTGAATCCAAGCCCAAAAGGTCCACGGACAGCAGCAGTCCT GCAACCGCTTTCTTGCTGTTGCCGTCATTTAAGCCGTTGCTGATTGTTTC GTGCGCGGACCGGACGAGCTTGATTCCTGTAGCGTACGTTCACCTCTTGT GTCATGGGTCTTGAGGGTTGTCCTGGCCGATCCACTGGGCACCCGTGCGC GTTTCCCTTCAGACGTCTCTCTTATCCGCACCAATTTCGTGTGGACTTGG CGCACCCGGTAGAGAGGTTGGAATCTTACTCTCACTTGTTCCCCTGCGGT CTCCTCTCCATAAAACGTGGATGTCGAAGCCGTACCCGTATGACTCATAC TTGCGTTCGACGCGATCATTTTCGTCGAGAAGAGACAACAACGGGTGGCA TTACTGGTTTTGCTTGTCTGACCCCTGCCTTGACCATCTGGTCACCCTCA CCCCAACCCCTTTGTAATGAAGCTTCTGCGGATCGAGGAAGAGCTCGGCG ACAAGGCCGTCTACTCCGGACAAAACTTCAGGAAGCCTAGCTGGATGGCG TAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6775:73..7875+

>mRNA_Ecto-sp13_S_contig6775.17698.1 ID=mRNA_Ecto-sp13_S_contig6775.17698.1|Name=mRNA_Ecto-sp13_S_contig6775.17698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1422bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6775:73..7875+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTCTCGCATGCTTCGACAGGACTCAGCGTATCTGATGCCTTCGTAGCCAC
GCCCTTCATGGGTGGTCGTGTAGCCGGGGCCGTTCCCGTCGCCAACGGCA
TGTCTATGTCGGCCATCTCGAAGGTGGTGGGGCGCGAGATCATCGACTCC
CGCGGGAACCCCACGGTGGAGGTGGACATGTACACGGAGGACGGCATGTT
CAGGGCCTCGGTGCCCAGCGGCGCCTCTACGGGCGTGTACGAGGCGTGCG
AGCTCCGTGACGGCGGTGCCCGCTACAGCGGCAAGGGCGTACTGACGGCC
GTCAAGAACGTCAACGAGGTCCTCGGCCCCATGGTGGTCGGGATGGACCC
CACCGAACAGCAGGCGCTCGACGACGCGATGCTCAAGGAGGACGGGACGG
ACAACAAGACCAACATGGGCGCCAACGCCATCCTCGGCGTGTCTCTGGCG
GCGGCTAAGGCCGGGGCGGCATCGAAGGGCGTCCCTCTCTACCAGCACTT
CGCCGACCTGGCCGGCAATGACAAGCTCGAGATGCCGGTGCCCGCCTTCA
ACGTCATCAACGGCGGGGAGCACGCCGGAAACGGTCTGGCCTTCCAGGAG
TTTATGATCCTCCCCACGGGCGCGTCGACCTTTGCCGAGGCCATGCAGAT
CGGCGCCGAGGTGTACCACGCCCTCAAGTCCGTCATCAAGGCCAAGTACG
GCACCGACGCGTGCAACGTGGGCGACGAGGGCGGTTTCGCGCCCAACATC
AAGAACAACCGTGAGGGGTGCGAGCTGCTTATGACGGCTATGGAGAAGGC
GGGGCACACCGAGAAGGTGAAGATCGGCATGGACGTGGCCTCGTCGGAGT
TCCACACGAGCGACAGCATGTACGACCTCGACTTCAAGAACAAGGACACC
AACACGGGCGATGAAAAGCTGACCGCCAAACAGCTGGGAGACTACTACAC
CAAATTAACCGCGGACTTCCCGATCGTGTCCATCGAAGACGCGTTTGACC
AGGACGACTGGGCAGGGTGGATCGACTTCACGGGTAGCGTGGAGGACAAG
ATCCAGACTGTGGGTGACGACTTGACGGTGACGAACATCAAGCGGATCAA
GAGGGCCGCTGACGAGGGTGCCTGCAACGCCCTCCTCCTCAAGGTGAACC
AGATCGGATCCGTGTCCGAGTCTATCGCTGCCGTCAAGCTTGCCAAGGAG
AACGGCTGGGGGGTGATGACCTCGCACCGGTCCGGGGAGACGGAGGACAA
CTACATCGCCGACCTGGCGGTGGGCCTGTGCACTGGTCAGATCAAGACGG
GGGCCCCTTGCCGGTCGGAGCGCCTCGCCAAGTACAACCAGCTTCTGCGG
ATCGAGGAAGAGCTCGGCGACAAGGCCGTCTACTCCGGACAAAACTTCAG
GAAGCCTAGCTGGATGGCGTAA
back to top