mRNA_Ecto-sp13_S_contig677.17692.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig677.17692.1
Unique NamemRNA_Ecto-sp13_S_contig677.17692.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig677.17692.1 vs. uniprot
Match: A0A6H5JE04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE04_9PHAE)

HSP 1 Score: 1369 bits (3544), Expect = 0.000e+0
Identity = 829/943 (87.91%), Postives = 843/943 (89.40%), Query Frame = 1 
Query:    1 MSTNSAGSAIATGSDAGEARGPTNTSVIIGNLKRDVDKEALKALLCQLGRVTNFRLQQPPGIDPASPATGVVEYASPEDASRVVAHVHGKLILGRPVTAWVAAPGSTAPPLPPGAPPPTSAASATSTAGPRPARAAYHSEMDHRHANPNHDKNGGRYPPAVGHNANSHEDARWERPPXXXXXQPVXXXXXXXXQDTYGDGYSHNQRQKQ-HQSWRSGRPMPQQSAANVPVAPRYGGEGGSAHYAERQWQDQRHGHGEADESAAWERPDRNQFSAAQRAPMRQQPPPSFHRPTGPQTSEWYDDADSQVPHGNSSYDDGGHLRGPRGRAMMPRRALGGSVGVPPRSSDDGYGDDDVPAGAMRXXXXXNSASHGVPLPGRATAWTDDAEYTMPPPISIKGEDFEKEVVKAAALLVAEREMAREEARKQGKQDWSGVDPTTGYEGPRKSKKARSGSRSMGEETDERKKREPSSRKDENDGDHRPKSKKTRHDSSGDRHGSVGKRADERKGKTKTREESKGGPQGDDRDRKREDSSRRSHXXXXXXXXXXXXXXXXXXXXXDNDPDSSKSSPKLGFSSWDRKSFNGSPWENQHQATGGFYVHVGGLSFSTTFTTLAKRFAAFGDVNGFKVIFNKVSCSAEETSKRKGSKEEVTKAAVVTASSGFAFISFDNERGMEKAVECMDGQKLDGNILKVTRGGRLQGRPHSGGRAFRAQAEPTPPNEGPPRRWQESKGNHHKYEHEQEYHPNQARHANPRPEPQGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNGRGDRRSVELIEAINEAAGESGRGKHADDKNRGATDDPLGALRCPRPSATSRKEASGSVKPAEVNGRVKIGYGGKSTSRDATGGDGDSSFRKVNEPREKARPSNTGSSDTRRITDRLGSKTSFGRS 2826
            MSTN AGSAIATGSD GEARGP NT VIIGNLKRDVDKEALKALLCQLG VTNFRLQQPPGIDPASPATGVVEYAS EDASRVVAHVHGKLILGRPVTAWVAAPGSTAPPLP G PP TSAA                             KNGGRYPPAVGHN NSHEDARWERP XXXXX   XXXXXXXXQDTYGDG SHNQRQ+Q HQSW SGRPMPQQS ANVP+APRYGGEGGSAHYAER WQDQRHGH EADESAAWERPDRNQF AAQRAPMRQQPPPSFHRPTGPQTSEWYDDADSQV HGNS+YDDGG  RGPRGRAMMPRRA  GSVGVPPRSSDDGYGDDDVPAGAMR     NSA HGVPL GRA AWTDDA+YTMPPPISIKGEDFEKEVVKAAALLVAEREMAREEARKQGKQ+WSG DPT GYEGPRKSKKARSGSRSMGEETDERKKREPSSRKDENDGDHRPKSKKTR DSSGDRHGSVGKRADERKGK +TREESKGGPQGDDRDRKREDSSR SH     XXXXXXXXXXXXXXXX NDPDSSKSSPK G SSWDRK FN SPWENQHQATGGFYVHVGGLSFSTTFTTLAKRFAAFGDVNGFKVIFNKVSCSAEETSKRKGSKEEVTKAAVVTASSGFAFISFD ERGMEKAVECMDGQKLDGNILKVTRGGRLQGRPHSGGRAFRAQAEPTPPN+GPPRRWQESKGNHHK+EHE+EY PNQARH NPRPEPQGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           R+GRGDRRSVELIEAI E+ G SGRGKHADDK+RGATDDPLGALRCPRPSATSRKEAS SVKPAEVNGRVKIGYGGKSTS D TGG+GDSSFRKVNEPR+ ARPSNTGSSDTRRITDRLGSKTSFGRS
Sbjct:    1 MSTNGAGSAIATGSDDGEARGPANTRVIIGNLKRDVDKEALKALLCQLGHVTNFRLQQPPGIDPASPATGVVEYASAEDASRVVAHVHGKLILGRPVTAWVAAPGSTAPPLPQGGPPSTSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGGRYPPAVGHNPNSHEDARWERPXXXXXXXXXXXXXXXXXQDTYGDGLSHNQRQQQQHQSWHSGRPMPQQSGANVPIAPRYGGEGGSAHYAERHWQDQRHGHSEADESAAWERPDRNQFPAAQRAPMRQQPPPSFHRPTGPQTSEWYDDADSQVAHGNSAYDDGGQRRGPRGRAMMPRRASAGSVGVPPRSSDDGYGDDDVPAGAMRRLPPPNSAPHGVPLSGRAAAWTDDAQYTMPPPISIKGEDFEKEVVKAAALLVAEREMAREEARKQGKQNWSGADPTPGYEGPRKSKKARSGSRSMGEETDERKKREPSSRKDENDGDHRPKSKKTRRDSSGDRHGSVGKRADERKGKARTREESKGGPQGDDRDRKREDSSRTSHKDKHRXXXXXXXXXXXXXXXXXNDPDSSKSSPKQGSSSWDRKGFNSSPWENQHQATGGFYVHVGGLSFSTTFTTLAKRFAAFGDVNGFKVIFNKVSCSAEETSKRKGSKEEVTKAAVVTASSGFAFISFDKERGMEKAVECMDGQKLDGNILKVTRGGRLQGRPHSGGRAFRAQAEPTPPNQGPPRRWQESKGNHHKHEHEEEYRPNQARHTNPRPEPQGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------RHGRGDRRSVELIEAIKESGGRSGRGKHADDKDRGATDDPLGALRCPRPSATSRKEASASVKPAEVNGRVKIGYGGKSTSLDTTGGNGDSSFRKVNEPRKNARPSNTGSSDTRRITDRLGSKTSFGRS 932
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BLAST of mRNA_Ecto-sp13_S_contig677.17692.1 vs. uniprot
Match: D8LJZ2_ECTSI (Polyphosphate kinase 2 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ2_ECTSI)

HSP 1 Score: 874 bits (2257), Expect = 7.070e-307
Identity = 562/616 (91.23%), Postives = 576/616 (93.51%), Query Frame = 1 
Query:  979 MMPRRALGGSVGVPPRSSDDGYGDDDVPAGAMRXXXXXNSASHGVPLPGRATAWTDDAEYTMPPPISIKGEDFEKEVVKAAALLVAEREMAREEARKQGKQDWSGVDPTTGYEGPRKSKKARSGSRSMGEETDERKKREPSSRKDENDGDHRPKSKKTRHDSSGDRHGSVGKRADERKGKTKTREESKGGPQGDDRDRKREDSSRRSHXXXXXXXXXXXXXXXXXXXXXDNDPDSSKSSPKLGFSSWDRKSFNGSPWENQHQATGGFYVHVGGLSFSTTFTTLAKRFAAFGDVNGFKVIFNKVSCSAEETSKRKGSKEEVTKAAVVTASSGFAFISFDNERGMEKAVECMDGQKLDGNILKVTRGGRLQGRPHSGGRAFRAQAEPTPPNEGPPRRWQESKGNHHKYEHEQEYHPNQARHANPRPEPQGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNGRGDRRSVELIEAINEAAGESGRGKHADDKNRGATDDPLGALRCPRPSATSRKEASGSVKPAEVNGRVKIGYGGKSTSRDATGGDGDSSFRKVNEPREKARPSNTGSSDTRRITDRLGSKTSFGRS 2826
            MMPRRA G SVGVPPRS+DDGYGDDDVP+GAMR   X NSASHGVPLPGRA AWTDDAEYTMPPPISIKGEDFEKEVVKAAALLVAEREMAREEARKQGKQDWSGVDPT G+EGPRKSKKARSG RSMGEETDERKKREPSSRKDENDGDHRP+SKKTR DSSGDRHGSVGKRADERKGKT+TREESKGGPQGDDRDRKRE       XXXXXXXXXXXXXXXXXXXX DND DSSKS PK G S+WDRK FN SPWENQHQATGGFYVHVGGLSFSTTFTTLAKRFAAFGDVNGFKVIFNKVSCSAEETSKRKGSKEEVTKAAVVTASSGFAFISFDNERGMEKAVECMDGQKLDGNILKVTRGGRLQGRPHSGGRAFRAQAEPTPPN+GPPRRWQESKGNH+K+EH+QEYHPNQ RHANPRPEP    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR+GRGD RSVELIEAI E+ G SGRGK ADDK+RGATDDPLGALRCPRPSATSRKEAS SVKPAEVNGRVKIGYGGKSTSRDATG +GDSSFRKV E RE ARPSNT SSDTRRITDRLGSKTSFGRS
Sbjct:    1 MMPRRASGSSVGVPPRSNDDGYGDDDVPSGAMRRPPXPNSASHGVPLPGRAAAWTDDAEYTMPPPISIKGEDFEKEVVKAAALLVAEREMAREEARKQGKQDWSGVDPTPGHEGPRKSKKARSGGRSMGEETDERKKREPSSRKDENDGDHRPRSKKTRRDSSGDRHGSVGKRADERKGKTRTREESKGGPQGDDRDRKREXXXXXXXXXXXXXXXXXXXXXXXXXXXRDNDLDSSKSLPKQGSSTWDRKDFNSSPWENQHQATGGFYVHVGGLSFSTTFTTLAKRFAAFGDVNGFKVIFNKVSCSAEETSKRKGSKEEVTKAAVVTASSGFAFISFDNERGMEKAVECMDGQKLDGNILKVTRGGRLQGRPHSGGRAFRAQAEPTPPNQGPPRRWQESKGNHNKHEHDQEYHPNQGRHANPRPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGRGDSRSVELIEAIKESGGGSGRGKLADDKDRGATDDPLGALRCPRPSATSRKEASASVKPAEVNGRVKIGYGGKSTSRDATGSNGDSSFRKVVETRENARPSNTSSSDTRRITDRLGSKTSFGRS 616
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BLAST of mRNA_Ecto-sp13_S_contig677.17692.1 vs. uniprot
Match: UPI000B8D12BE (glycine-rich RNA-binding protein RZ1A n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D12BE)

HSP 1 Score: 56.6 bits (135), Expect = 4.410e-5
Identity = 39/109 (35.78%), Postives = 51/109 (46.79%), Query Frame = 1 
Query: 1789 VGGLSFSTTFTTLAKRFAAFGDVNGFKVIFNKVSCSAEETSKRKGSKEEVTKAAVVTASSGFAFISFDNERGMEKAVECMDGQKLDGNILKVTRGGRLQG--RPHSGGR 2109
            +GGLS+STT   L   F  FG +   KV+ +K S                        S GF F++FD ++ ME A+E M+G  LDG  + V R    QG  R H GGR
Sbjct:   11 IGGLSWSTTDRGLKDAFEKFGHLLEAKVVVDKFS----------------------GRSRGFGFVTFDEKKAMEDAIEAMNGMDLDGRNITVDRAQPQQGSSRDHDGGR 97
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BLAST of mRNA_Ecto-sp13_S_contig677.17692.1 vs. uniprot
Match: A0A0D9W144_9ORYZ (RRM domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9W144_9ORYZ)

HSP 1 Score: 53.9 bits (128), Expect = 9.530e-5
Identity = 32/96 (33.33%), Postives = 46/96 (47.92%), Query Frame = 1 
Query: 1777 FYVHVGGLSFSTTFTTLAKRFAAFGDVNGFKVIFNKVSCSAEETSKRKGSKEEVTKAAVVTASSGFAFISFDNERGMEKAVECMDGQKLDGNILKV 2064
            F   +G LS+STT  +L   F  FG++   KV+F+K S                        S GF F++FD ++ ME A+E M+G  LDG  + V
Sbjct:    7 FRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYS----------------------GRSRGFGFVTFDEKKAMEDAIEGMNGLDLDGRAITV 80
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig677.17692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JE04_9PHAE0.000e+087.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJZ2_ECTSI7.070e-30791.23Polyphosphate kinase 2 family protein n=1 Tax=Ecto... [more]
UPI000B8D12BE4.410e-535.78glycine-rich RNA-binding protein RZ1A n=1 Tax=Cari... [more]
A0A0D9W144_9ORYZ9.530e-533.33RRM domain-containing protein n=1 Tax=Leersia perr... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig677contigEcto-sp13_S_contig677:5721..14080 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size3305
Hectar predicted targeting categoryother localisation
Exons5
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-06_007530.1
Cds size2829
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig677.17692.1prot_Ecto-sp13_S_contig677.17692.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig677 5721..13604 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463930.6174235-CDS-Ecto-sp13_S_contig677:5720..58211681463930.6174235-CDS-Ecto-sp13_S_contig677:5720..5821Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 5721..5821 +
1681463930.6318974-CDS-Ecto-sp13_S_contig677:6023..61231681463930.6318974-CDS-Ecto-sp13_S_contig677:6023..6123Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 6024..6123 +
1681463930.6539304-CDS-Ecto-sp13_S_contig677:6516..66281681463930.6539304-CDS-Ecto-sp13_S_contig677:6516..6628Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 6517..6628 +
1681463930.6733196-CDS-Ecto-sp13_S_contig677:10176..119241681463930.6733196-CDS-Ecto-sp13_S_contig677:10176..11924Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 10177..11924 +
1681463930.688906-CDS-Ecto-sp13_S_contig677:12836..136041681463930.688906-CDS-Ecto-sp13_S_contig677:12836..13604Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 12837..13604 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463930.7010279-UTR-Ecto-sp13_S_contig677:13604..140801681463930.7010279-UTR-Ecto-sp13_S_contig677:13604..14080Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig677 13605..14080 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig677.17692.1

>prot_Ecto-sp13_S_contig677.17692.1 ID=prot_Ecto-sp13_S_contig677.17692.1|Name=mRNA_Ecto-sp13_S_contig677.17692.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=943bp
MSTNSAGSAIATGSDAGEARGPTNTSVIIGNLKRDVDKEALKALLCQLGR
VTNFRLQQPPGIDPASPATGVVEYASPEDASRVVAHVHGKLILGRPVTAW
VAAPGSTAPPLPPGAPPPTSAASATSTAGPRPARAAYHSEMDHRHANPNH
DKNGGRYPPAVGHNANSHEDARWERPPPPQQGQPVVKRAPPPPQDTYGDG
YSHNQRQKQHQSWRSGRPMPQQSAANVPVAPRYGGEGGSAHYAERQWQDQ
RHGHGEADESAAWERPDRNQFSAAQRAPMRQQPPPSFHRPTGPQTSEWYD
DADSQVPHGNSSYDDGGHLRGPRGRAMMPRRALGGSVGVPPRSSDDGYGD
DDVPAGAMRRPPPPNSASHGVPLPGRATAWTDDAEYTMPPPISIKGEDFE
KEVVKAAALLVAEREMAREEARKQGKQDWSGVDPTTGYEGPRKSKKARSG
SRSMGEETDERKKREPSSRKDENDGDHRPKSKKTRHDSSGDRHGSVGKRA
DERKGKTKTREESKGGPQGDDRDRKREDSSRRSHKDKHRDSRSGSRTRRS
SSRARDNDPDSSKSSPKLGFSSWDRKSFNGSPWENQHQATGGFYVHVGGL
SFSTTFTTLAKRFAAFGDVNGFKVIFNKVSCSAEETSKRKGSKEEVTKAA
VVTASSGFAFISFDNERGMEKAVECMDGQKLDGNILKVTRGGRLQGRPHS
GGRAFRAQAEPTPPNEGPPRRWQESKGNHHKYEHEQEYHPNQARHANPRP
EPQGSYTKPRPEQQGYHTKPRPEQQGYNTRPRPEQQGYNTMPRPEKQGYY
TKPKLQQEGYHTKPRNGRGDRRSVELIEAINEAAGESGRGKHADDKNRGA
TDDPLGALRCPRPSATSRKEASGSVKPAEVNGRVKIGYGGKSTSRDATGG
DGDSSFRKVNEPREKARPSNTGSSDTRRITDRLGSKTSFGRS*
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mRNA from alignment at Ecto-sp13_S_contig677:5721..14080+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig677.17692.1 ID=mRNA_Ecto-sp13_S_contig677.17692.1|Name=mRNA_Ecto-sp13_S_contig677.17692.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8360bp|location=Sequence derived from alignment at Ecto-sp13_S_contig677:5721..14080+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTACCAATAGCGCGGGATCCGCGATCGCGACAGGGTCAGATGCTGG
TGAAGCCCGAGGTCCCACGAATACAAGCGTCATCATTGGCAATCTGAAAA
GGTACGGGTCGCGCGAAACGAACACCCTCTTTCCACGAGTGCTGTTCTGC
GCTCTACCGCCGAGTGGGTACCTTGTTGCGCCCCGCTCCCCTCGAGATAC
TGGTATCCAAGTGCGCGTTCGACCGCACGTGCATTGCTTAAGGAAGAACA
AGCTCAGCGTTCCATCTCACCAAGCCATCGAGTTCATGTGTTTGCTCTCG
TAGGGACGTGGACAAGGAAGCCCTCAAGGCGCTTCTATGCCAGCTCGGAC
GCGTAACTAATTTTCGCCTTCAGCAGCCACCAGGGATCGATCCTGCTTCC
CCGGTACGGACTTGTGGCCGCGTTTCGCGGCAGGCTCAAGGGCTATGATG
AGTTGGAATAGGGCGGTATGATGCAGGAGTTGTTCTTGGCGAACTCTTCG
GGTTGTGCTGATGTGTGTCTTGTGGTTTGGCACCAGATGTGTGTTATCTC
TGATCATGCTTCGAATCTTCGAAAACCTCATGTCCACACACGCACACACA
ACAGCGTCCCCCCGCGGACTAAACTCGCAGCACAACTCCGATTTTCACTC
GTGGATTGTTCATGCTTGGATGAGTGCAACAGCAGCAGCGAACTGCCCAA
AAAGAACAAAAAGGTGCGTATCCTGTTTACTATCGCCGCTCTTTCTCTCT
CTCTCTCTCTAATCCCACGTCCGTCTGCATCAACAATAATACGAAGGCTA
CGGGCGTCGTCGAATACGCTTCTCCCGAAGATGCAAGTAGGGTGGTGGCT
CATGTTCACGGGAAACTGATACTGGGCCGGCCTGTCACAGCCTGGGTCGC
AGCACCAGGTGGGTGCTCGCTAGGATTGACAGCGGGACTCGCAATTTTTT
TTTTGTCCATGTTTGTGTGCTTACACAACCAGCATCAAAATGCTCCACAG
CGCATGTGTGTAGTGTCTTCTCTTTCGGCATGAATCGTGCTTCGGCACCA
CTTAACTTTCTCCGATTTCTTCTCAGCGGCACGCAGGAGGCTCGTCGGTA
AAATACCGCACATGCCCCGAGGATGCCAGGCATAAGTGGCACGCGTGCAA
GCGATGCCTAGAATCGCCCTAACTAGCTCTATTATGCTGGGAGGCCTTCG
TCACCACAACACCTCCGCAGGGAACTGTGTAAGATAGTTGCATAGAAAGG
AACACGTTTGACTCCTGCGCAATACAAACACGTACGTTCACACAACACCA
TTAGCAACACGATTGAAGTGCACAAGTGAAGGGGTTGAAAAGCAGCTGGT
TACAGCAGTAGGATCTGCGGCGAAGACGCCGGAATAGCTGACACTCACGC
ACACGCGATTGGTCAGAGAGAGTAACCAATGTTTTTCCGTGCACCGCAGG
TCACATAATGCGATACTCTGCAGTTGTAAATACGGAAACCAGCACTCCGA
ATTGTGAGCGTTGAGATACGGCAAACTTTGATAAACGTTGGCCACGTCCT
CTTGTGTTGCCCCCGGGAGGCAAGCCCACCAGACTCCCGAAGGGGAGCCT
TGTAGTTCATGTGTCATTCAATGTTTTTCCTGCTTCGGTTTCAACTTCTC
TCGCGGCAGCGAATATTTTCTCGTGGCTTCCTTCTCGGGGGCTCGTCCGT
ACAATACCGCGCATGCCCGAGGACTGCCAGGCACCCGTGGCATGTGAAAA
CGACGCCCAGATTCTCCACGACTGGCTCTATTTCGCTGGAGGCATCCCGA
ACAAAGAATAGCTTCGAAGGAAATGCAGACACTCCCCTGCATGAGCAGGA
AGGCTTTTGATTCCCGCGTTCGCTGAAACGTTCCCACACACGATGAGCAA
CACGGTACAACATGTCGTCCCTAACACGATGAGCGAGCGATCAAGCGCAG
CGGGTTACATAAGTAGGATCTGCGACAAAGATGCCGCTAGCTTACAACAG
TACACACTTCCGCACACGCGGAAGTCACGATGATAATTACCCCGCACATG
ACGCAAATTCTGCAATTTGTATGGAAAACTGGCGCTGTACCGAACGTTGA
CATGCAACGATGCAACCGTGATGACATTGGTCATGTCCTCTTGGGTCATC
CCCGGTAGGCAAGTCACCAAACTCCCCAAGGGGAGCCTTGTAGTATCATT
TACCATTTACCACACCCACATGTATTCAACGTGCAATCCTTTGTACCCGT
AGGGGACGCAAGTCTCTCACGTTCGCTGCGGATTGAAATGTTGCTCATTA
CTTTCGTTGCTCTCTAGATATTCGACAAAGATTGGGGTGGAATTGCTGGA
ATAGGCGGTATTGCATCGTGTTCTGGATTGCGGAGAGGGGACTAATGGTT
AAGAAACAGCCCGAGAGCACGTTTGCAACCTCCGCGGAGGTACCCAGCAG
AAATGCTCCATCTTTATGACACCATAACTCGGTAGCAAATGTGGCCGTAC
CAAGTATCATGGTTCTCGTCCTCGGTCCGTGGCAACTCATGGGACACATT
TGCTTGGTGCCACTGGGGTGGACATGAGCAGGCGTCGATCTTGGTTCACT
ACCATCGACGTTTCCTCACCCCACCCAAAGGTTTTACTGTATTTTTCATT
TCAGCTGAAATTGTCAAATACGGTTCTACACAATAATGTGCTGTTCCACG
ACAATGTCGAGGTAATATGTCGGTGAGGTGAACGCAAACCATTGAAGCTC
CAGGAGGTTCCCATGCAAGACGTCTAACGACGTTTTCCGAGCTGTGACCA
TCATTCGGGGGATCTCTGCAATATCCCAAATTTTGACAATCCGTCATATG
CAAAACACCAAAGCCACGTGAAAACGAACAATGTTCCAACTCCAGACTCC
CGCCTGTTGGTACTCCAGACTCCCGCCTGTTGGTGGCTATGGGTGGCAAC
AGCGTCTCCCCTGACGACGGCTCGTCAACCGACACCTGAAGCGATTGAGG
ACCACTAGGCGACCTGTTGCGAAGGTTTTTTTCTCGCACCATTCATATCG
CACGTAGACGGTAAACCACACATAGTGCTCACGTTCTGCTGGTAATTGCA
TGATTGTTTATCGTAGCCTCCATCGGAGCCAGAGGCACAAAGTCAAGCTT
TTAAAAAGAAAGTCAAAAAGAACCTCGAGTGATTGGTTGGGCAATAAAAA
CTTGATCACCCCCGCCGCCCAATTAATTATTCGTGGTTTGTTCGTCAGCA
CAGACAACAAGCACGCACTGTGTGCCCTACAATGCTGTGTAGGCAACAAT
ATGCCCTGCGGCTATTCTCTTTCTGTTCGTAACACACGGCAGCAGCAAGC
AGAAGTATACTCTAATCTAGCAACAGCGACACGGCAGCTGCAGCAGCAAA
AACAGAACATTAAAGCACGTTAGTGCTAACCACACAACCCCCCACTCACT
GCTTCTGCTGCTGTAGAGCAGCTATGCACCCTTGCATACATGTCAGTGCA
GGTCACGGCTGAAAGAGGTGAAGCATGTCTGTTGTTTGTTGTGTGTCCTA
CATGTTTGACGAGCAACATGCGGGGTGTAAGCACAGCAACAGCAGCAGTG
TGCTAGAACCTGCAGCGGGGAGTCGAACAATCGACGGAATCGAGTGCGAA
ATACTTGTTTTTGTCATTGGAAGCCACATGTGTTGATTTAGTCTACAGGA
GAGTTGATTCGCTCCTATGGTCTAGAGATCTAAGACTCACTCTTTTTGCC
CTCCGCTAATCCACCGCATTTTTGCGTTATTTGGTTTAACAAAAAAGCGC
CCACAACACCCATCTCGTTCGTCATTCAGACAACGTCCCACACTGACTGC
TGTGCAGCAACAAATGTTGCTGCGGGGGCCACTCATCAGGTATCTGTCTG
TGCCAAGCGCACCACATCGGTTCCCCGCAGCATCGCGTCCCAAGAGCTGA
TCATTTCCCAAAAACAAGAAAATTTTATTCGAAGAAGAGAGAAATCAGTG
GGGGAAGCAGCCGTGGGCATACGACAATATTGTTTATCGTAGCCTCCTTT
TCACTCTCTGCTTGCAAAGCATACCGATTCTTGCTTTATCAAGTCCTTAA
TGACCCGGCGATTTTCACCGGGGGTATGGGAAGTGTCAGACCAAGATCCT
GTATACCACACATGGAACAGTGTTAAAAACCCGAAAAAGCGCTACAAGAG
TCAGATAGACACCATCGCAAACGGCAATCAAGTGTAGTGTGAACACGATA
TCCCTCCGATGTGCCAGTTGAACCTCTTGTTTACCAAGCACCGTCGCATG
ATGCTGCACCCTGTTTTGGTCGCTGGCTTGATGAAAACTCTTCTACGAAG
ATCCGTCCCTCTTCAGTGTGGCTTGTTTGTGTGAGTTTTTGACAAACGTG
TTACCCTCCCCGCGCTGCTCCGATCGCCTTCGTAATCCAAACATGCGATC
CCATAGGCTCTACCGCGCCGCCACTCCCGCCGGGTGCTCCCCCGCCTACG
AGCGCTGCCAGCGCCACCTCGACTGCAGGTCCAAGGCCAGCCCGCGCCGC
TTATCACAGCGAAATGGATCACAGGCATGCTAACCCCAACCACGACAAGA
ACGGAGGGAGGTACCCCCCAGCAGTGGGTCACAACGCCAATAGCCATGAG
GACGCGCGTTGGGAGCGCCCCCCGCCTCCACAGCAAGGGCAGCCGGTAGT
AAAGCGCGCCCCGCCACCTCCTCAGGACACGTACGGTGATGGTTACTCTC
ACAATCAGCGGCAAAAGCAACACCAATCATGGCGTTCCGGGCGTCCAATG
CCACAGCAGAGCGCGGCCAATGTTCCCGTAGCTCCGAGGTACGGAGGTGA
AGGTGGTTCTGCCCACTATGCGGAGCGGCAGTGGCAGGACCAGCGACACG
GGCACGGCGAAGCAGACGAGTCTGCTGCATGGGAGCGCCCCGATAGGAAC
CAATTCTCGGCCGCGCAACGGGCGCCGATGCGCCAGCAGCCCCCCCCGTC
GTTCCATCGTCCCACCGGTCCGCAGACGTCAGAATGGTACGACGACGCGG
ATTCTCAAGTCCCTCATGGCAATTCTTCTTACGATGACGGTGGTCACCTG
CGTGGGCCTCGTGGCCGAGCCATGATGCCTCGTAGGGCTTTAGGAGGCTC
CGTTGGCGTCCCACCGCGCAGCAGCGACGACGGGTACGGCGATGACGACG
TACCCGCTGGGGCCATGCGCAGGCCTCCTCCGCCCAATAGTGCATCTCAT
GGCGTGCCGCTTCCCGGTCGCGCAACCGCCTGGACGGATGACGCGGAGTA
CACAATGCCGCCGCCAATATCTATTAAGGGAGAGGACTTCGAGAAAGAAG
TTGTCAAAGCAGCGGCGCTTCTCGTGGCGGAACGAGAGATGGCTCGAGAA
GAGGCGAGGAAGCAGGGCAAGCAAGACTGGTCAGGCGTCGATCCCACCAC
GGGGTACGAAGGCCCAAGAAAGAGCAAGAAGGCGCGCAGCGGCAGCCGTT
CCATGGGAGAAGAGACCGACGAGCGCAAGAAACGAGAACCAAGCAGTCGA
AAGGACGAAAATGATGGCGACCATCGGCCAAAGAGTAAAAAGACGCGCCA
CGACAGCAGTGGCGACAGGCATGGCTCCGTCGGGAAGCGCGCAGACGAGC
GCAAGGGCAAGACAAAGACTCGAGAAGAAAGCAAAGGAGGGCCGCAGGGT
GATGACCGAGACAGGAAGCGTGAGGATAGCAGCAGAAGATCGCACAAGGA
TAAACACAGAGACTCGCGGAGCGGCAGCCGCACCCGCCGCAGCAGCAGCA
GGGCGAGGGACAACGACCCTGATTCATCGAAGTCCTCACCCAAGCTGGGC
TTCTCTTCTTGGGATCGCAAGAGCTTCAACGGCAGTCCTTGGGAAAATCA
GCACCAAGCGACGGGTGGTTTCTACGTGCACGTTGGGGGGCTTTCATTCT
CAACGACATTTACCACGCTAGCCAAGCGTTTTGCGGCCTTCGGCGATGTC
AACGGATTCAAGGTGATTTTCAACAAAGTCAGCTGCAGCGCGGAAGAAAC
AAGCAAACGGAAAGGCTCCAAAGAGGAGGTGACCAAGGCCGCTGTGGTCA
CAGCGAGCTCCGGCTTCGCCTTCATCAGCTTCGACAACGAACGGGGCATG
GAGAAGGCGGTCGAGTGCATGGATGGCCAGAAGTTAGACGGAAATATTCT
CAAGGTGAGAGCGGAGGGTACCGAAGACCACCTGAGACCGGCGTGGCGAA
GTCCTCCCTCTGCTATCTCAAGTGGAAAGCACATGCTCACAATGCAGCCT
TCGCTGGTGATGATGCTGCCGACATGCGTTGTTCTTGCCAGCACCGACAT
TGGAAATGTCTTTAATCGCTTCACAAATGCCTCAGCCTATGCTGTCACCA
CCGCGATAGAAGTGTCATACGAAGCATTTACCTCTTGATTCACTCTTCGA
GAGTGATAATTGGTTGCTGTCGGACCGCTGTAGCGTCGCAGGTGGCGCCT
AATCGCAATAGCTAAAGGGGCCCTCCCGGTGGAAACCAAGAAACCCCCTA
GGCTACACCCGAATCTTAAATTTTGGTCGCGAGGGGGAGGCGGGGGGGAT
CGATTGTATGGGATTTGACATAAAATACTTAGACCTATATGTGCTTAGTT
ATACGGCATTTTAGTAGCTGGCATTAAGTTTCTTCCTGTATTGTGGTATG
ATTTAGCATGGCAATACTTGAACGTATGAACTCCGGTATTGTACGAATTT
TACAACACACTCAAGCCTACAGGATAGAGTATACCTACACTCAAACCGTC
ACACCGAGGTAAATATGGATTGTAGAACGTCATAGTTTCAGCCTGTAGGA
GATGTACGGCCTGCTTGACCTAGTCACCCCCGCAAAATTTGGGTTTTAGA
ATACGACCCGAAGGCCAATACAAGAAACAATATACACCTGTAAATATGTA
CGCACAATCCCAAACATGCTGCTGTAAGGAAAAAGCGAGCCTACTGATCC
TGAGCGTCAACCTTGATTCGGGAGGAGGGCGGGGCATTCCTTGGTTTTCA
CTGGGAGGACCCTGCTTTTCTACGCAGTGTATCTCTTGTCATCGAAATCT
CCCTTGCTTGTTGCAGGTGACCCGCGGCGGGCGCTTACAAGGAAGGCCAC
ACAGTGGTGGGAGAGCTTTCCGTGCACAGGCGGAACCAACGCCTCCGAAT
GAGGGCCCGCCCCGTCGATGGCAGGAATCGAAGGGAAATCACCACAAATA
CGAGCACGAGCAGGAATACCATCCAAATCAGGCGCGTCACGCAAACCCCA
GACCGGAGCCGCAGGGAAGCTACACTAAACCGAGGCCGGAACAGCAGGGA
TACCACACTAAACCCAGACCGGAGCAGCAGGGATACAACACTAGACCCAG
ACCGGAGCAGCAGGGATACAACACTATGCCGAGACCAGAAAAGCAGGGAT
ACTACACAAAGCCCAAGCTGCAGCAGGAGGGATACCACACCAAACCTCGG
AACGGGAGAGGAGACCGTCGCTCCGTAGAGCTCATTGAGGCGATCAATGA
AGCCGCTGGTGAAAGTGGCCGCGGTAAACACGCCGATGACAAAAATCGCG
GCGCCACCGACGATCCCCTCGGCGCCCTCCGCTGTCCTCGGCCTTCTGCC
ACTTCGCGCAAGGAGGCAAGTGGCTCGGTTAAGCCGGCGGAGGTCAACGG
CCGCGTTAAAATTGGATACGGCGGGAAATCGACCAGTCGCGACGCCACTG
GTGGTGACGGCGACAGCAGCTTCAGGAAAGTCAACGAGCCGAGGGAAAAG
GCCCGGCCATCCAATACCGGCAGCTCTGACACGCGGCGAATCACTGACCG
CCTCGGTTCGAAGACATCATTTGGACGTTCGTAGATCCACATCGTGTACC
AGGTCCACGTCATCAAGTCTACCCGCGAACGGCTAGGTGGACAAAGCATT
ATGTCGTGAATCCGACGAACCCCGAGCCGAGAAGCCCTAGTTTTGTTGTG
CTCCGATTTTGTTCCGGGGGTGGGTTTGAGGCGTTGGAAAGGCTCCCATA
GCGTCACTGCAAAAAGCTTTCCTCGGAGTGTACTAGCGAGTGAACGTGAA
CCCAAGCCGTGCGGTCATGCTTCGCTCGGGCAACAGCAGTATCCAGGCGT
CCATCACTTCGTGCTCTGTCGTGATACGGCTTTCTCGGTGCCGTTTTACC
TTGAGCGTCAGATCTCCACAGATGCATGCGGAGTCTGTAGGAGGGGGGGC
TTCCACAGTGCATGGTCCTCATGTCAACTCCTCAAGACCTTTGGAAGTCG
TCACCATTAGTAAACTACATTTTCGTGAAACAGCTGGCAGTCACAGATCT
TTTGGGGTAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig677:5721..14080+

>mRNA_Ecto-sp13_S_contig677.17692.1 ID=mRNA_Ecto-sp13_S_contig677.17692.1|Name=mRNA_Ecto-sp13_S_contig677.17692.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2829bp|location=Sequence derived from alignment at Ecto-sp13_S_contig677:5721..14080+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTACCAATAGCGCGGGATCCGCGATCGCGACAGGGTCAGATGCTGG
TGAAGCCCGAGGTCCCACGAATACAAGCGTCATCATTGGCAATCTGAAAA
GGGACGTGGACAAGGAAGCCCTCAAGGCGCTTCTATGCCAGCTCGGACGC
GTAACTAATTTTCGCCTTCAGCAGCCACCAGGGATCGATCCTGCTTCCCC
GGCTACGGGCGTCGTCGAATACGCTTCTCCCGAAGATGCAAGTAGGGTGG
TGGCTCATGTTCACGGGAAACTGATACTGGGCCGGCCTGTCACAGCCTGG
GTCGCAGCACCAGGCTCTACCGCGCCGCCACTCCCGCCGGGTGCTCCCCC
GCCTACGAGCGCTGCCAGCGCCACCTCGACTGCAGGTCCAAGGCCAGCCC
GCGCCGCTTATCACAGCGAAATGGATCACAGGCATGCTAACCCCAACCAC
GACAAGAACGGAGGGAGGTACCCCCCAGCAGTGGGTCACAACGCCAATAG
CCATGAGGACGCGCGTTGGGAGCGCCCCCCGCCTCCACAGCAAGGGCAGC
CGGTAGTAAAGCGCGCCCCGCCACCTCCTCAGGACACGTACGGTGATGGT
TACTCTCACAATCAGCGGCAAAAGCAACACCAATCATGGCGTTCCGGGCG
TCCAATGCCACAGCAGAGCGCGGCCAATGTTCCCGTAGCTCCGAGGTACG
GAGGTGAAGGTGGTTCTGCCCACTATGCGGAGCGGCAGTGGCAGGACCAG
CGACACGGGCACGGCGAAGCAGACGAGTCTGCTGCATGGGAGCGCCCCGA
TAGGAACCAATTCTCGGCCGCGCAACGGGCGCCGATGCGCCAGCAGCCCC
CCCCGTCGTTCCATCGTCCCACCGGTCCGCAGACGTCAGAATGGTACGAC
GACGCGGATTCTCAAGTCCCTCATGGCAATTCTTCTTACGATGACGGTGG
TCACCTGCGTGGGCCTCGTGGCCGAGCCATGATGCCTCGTAGGGCTTTAG
GAGGCTCCGTTGGCGTCCCACCGCGCAGCAGCGACGACGGGTACGGCGAT
GACGACGTACCCGCTGGGGCCATGCGCAGGCCTCCTCCGCCCAATAGTGC
ATCTCATGGCGTGCCGCTTCCCGGTCGCGCAACCGCCTGGACGGATGACG
CGGAGTACACAATGCCGCCGCCAATATCTATTAAGGGAGAGGACTTCGAG
AAAGAAGTTGTCAAAGCAGCGGCGCTTCTCGTGGCGGAACGAGAGATGGC
TCGAGAAGAGGCGAGGAAGCAGGGCAAGCAAGACTGGTCAGGCGTCGATC
CCACCACGGGGTACGAAGGCCCAAGAAAGAGCAAGAAGGCGCGCAGCGGC
AGCCGTTCCATGGGAGAAGAGACCGACGAGCGCAAGAAACGAGAACCAAG
CAGTCGAAAGGACGAAAATGATGGCGACCATCGGCCAAAGAGTAAAAAGA
CGCGCCACGACAGCAGTGGCGACAGGCATGGCTCCGTCGGGAAGCGCGCA
GACGAGCGCAAGGGCAAGACAAAGACTCGAGAAGAAAGCAAAGGAGGGCC
GCAGGGTGATGACCGAGACAGGAAGCGTGAGGATAGCAGCAGAAGATCGC
ACAAGGATAAACACAGAGACTCGCGGAGCGGCAGCCGCACCCGCCGCAGC
AGCAGCAGGGCGAGGGACAACGACCCTGATTCATCGAAGTCCTCACCCAA
GCTGGGCTTCTCTTCTTGGGATCGCAAGAGCTTCAACGGCAGTCCTTGGG
AAAATCAGCACCAAGCGACGGGTGGTTTCTACGTGCACGTTGGGGGGCTT
TCATTCTCAACGACATTTACCACGCTAGCCAAGCGTTTTGCGGCCTTCGG
CGATGTCAACGGATTCAAGGTGATTTTCAACAAAGTCAGCTGCAGCGCGG
AAGAAACAAGCAAACGGAAAGGCTCCAAAGAGGAGGTGACCAAGGCCGCT
GTGGTCACAGCGAGCTCCGGCTTCGCCTTCATCAGCTTCGACAACGAACG
GGGCATGGAGAAGGCGGTCGAGTGCATGGATGGCCAGAAGTTAGACGGAA
ATATTCTCAAGGTGACCCGCGGCGGGCGCTTACAAGGAAGGCCACACAGT
GGTGGGAGAGCTTTCCGTGCACAGGCGGAACCAACGCCTCCGAATGAGGG
CCCGCCCCGTCGATGGCAGGAATCGAAGGGAAATCACCACAAATACGAGC
ACGAGCAGGAATACCATCCAAATCAGGCGCGTCACGCAAACCCCAGACCG
GAGCCGCAGGGAAGCTACACTAAACCGAGGCCGGAACAGCAGGGATACCA
CACTAAACCCAGACCGGAGCAGCAGGGATACAACACTAGACCCAGACCGG
AGCAGCAGGGATACAACACTATGCCGAGACCAGAAAAGCAGGGATACTAC
ACAAAGCCCAAGCTGCAGCAGGAGGGATACCACACCAAACCTCGGAACGG
GAGAGGAGACCGTCGCTCCGTAGAGCTCATTGAGGCGATCAATGAAGCCG
CTGGTGAAAGTGGCCGCGGTAAACACGCCGATGACAAAAATCGCGGCGCC
ACCGACGATCCCCTCGGCGCCCTCCGCTGTCCTCGGCCTTCTGCCACTTC
GCGCAAGGAGGCAAGTGGCTCGGTTAAGCCGGCGGAGGTCAACGGCCGCG
TTAAAATTGGATACGGCGGGAAATCGACCAGTCGCGACGCCACTGGTGGT
GACGGCGACAGCAGCTTCAGGAAAGTCAACGAGCCGAGGGAAAAGGCCCG
GCCATCCAATACCGGCAGCTCTGACACGCGGCGAATCACTGACCGCCTCG
GTTCGAAGACATCATTTGGACGTTCGTAG
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