mRNA_Ecto-sp13_S_contig6763.17684.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6763.17684.1
Unique NamemRNA_Ecto-sp13_S_contig6763.17684.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6763.17684.1 vs. uniprot
Match: D7FSE5_ECTSI (Casein kinase II subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSE5_ECTSI)

HSP 1 Score: 505 bits (1300), Expect = 1.960e-170
Identity = 440/577 (76.26%), Postives = 443/577 (76.78%), Query Frame = 1 
Query:    4 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHKSAKCMQRRLPHSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAXXXXXXXXXXXXXXXXXXXXXXTGGKGVLWAGXXXXXXXXXXXGSAVMSGKDGRDGVAGGGDNKRRQQERESRADGAAEAAGQEGWGGS-CGKGTRQGDGESSRGRAGDGSQDDSATSRATVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFLGGACSGPAVVSDGKSCGDKEGVGEEERGRRRAGSGGLAALAEAATKSEDGGDGKRATXXXXXXXXXXXXXXXXXXXSVGAEERLAAEEAVVAATPVVERRTGSREIASVVKAGA 1731
            MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK                                                                                    XXXXXXXXXXX FAXXXXXXXXXXXXXXXXXXXXXX   KGVLWA XXXXXXXXX  GSAVMSGKDGR+G AGGGDNKRRQQERESRADGAAE AGQEGWGGS CGKGTRQGDGESSRGRAGDGSQDDS TSR TVTG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GF G ACSGPAVV DG SCGDKEGVGEEERGRRRAGSGGLA LAEAATKSE         XXXXXXXXXXXXXXXXXXX               A  PVVERRTGS+E+A VVKA A
Sbjct:    1 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHKGTATSA----------------------------------------------------------------------GGGAGSGIXXXXXXXXXXXSFAXXXXXXXXXXXXXXXXXXXXXXXXXKGVLWAXXXXXXXXXXSAGSAVMSGKDGREGAAGGGDNKRRQQERESRADGAAETAGQEGWGGSSCGKGTRQGDGESSRGRAGDGSQDDSVTSRGTVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRG--GFPGEACSGPAVVPDGNSCGDKEGVGEEERGRRRAGSGGLATLAEAATKSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-MPVVERRTGSKEMAPVVKAEA 504
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BLAST of mRNA_Ecto-sp13_S_contig6763.17684.1 vs. uniprot
Match: A0A6H5KX78_9PHAE (Casein kinase II subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX78_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 3.740e-125
Identity = 442/624 (70.83%), Postives = 447/624 (71.63%), Query Frame = 1 
Query:    4 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHKSAKCMQRRLPHSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAXXXXXXXXXXXXXXXXXXXXXXTGGKGVLWAGXXXXXXXXXXXGSAVMSGKDGRDGVAGGGDNKRRQQ-------------------------------------------ERESRADGAAEAAGQEGWGGSCGKGTRQGDGESSRGRAGDGSQDDSATSRATVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----GFLGGACSGPAVVSDGKSCGDKEGVGEEERGRRRAGSGGLAALAEAATKSEDGGDGKRATXXXXXXXXXXXXXXXXXXXSVGAEERLAAEEAVVAATPVVERRTGSREIASVVKAGA 1731
            MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHKSAKCMQRRLPHSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXX   VMSGKDGR+G                                                       E ESRADGAAEAAGQEGW                           S TSRATVTG                         XXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXX     GF G ACSGPAVV DG SCGD+EGVGEEERGRRRAGS                       XXXXXXXXXXXXXXXXXXXSVGA ERLAAEEAVV A PVVE  +G +E+A VVKAGA
Sbjct:   35 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHKSAKCMQRRLPHSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXVMSGKDGREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESESRADGAAEAAGQEGWXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTSRATVTGGAGCGNTSNNGTTGSRTGRSKSPGGXXXXXXXXXXXXXXXXEGGRGWASDPAQXXXXXXXXXXXXXXXXXXRGGFPGKACSGPAVVPDGNSCGDREGVGEEERGRRRAGSXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGAVERLAAEEAVVTAMPVVELISGPKEMAPVVKAGA 647
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BLAST of mRNA_Ecto-sp13_S_contig6763.17684.1 vs. uniprot
Match: A0A6V1P2G8_HETAK (Casein kinase II subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P2G8_HETAK)

HSP 1 Score: 249 bits (637), Expect = 1.060e-73
Identity = 113/177 (63.84%), Postives = 140/177 (79.10%), Query Frame = 1 
Query:    4 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHKSAKCMQR 534
            MLCEVDRSYIEDGFNLYGLR H  NFQ  LDIILD +  D+  DP++AQ+A++LYG+IHARFI T+RGLE MYKKYR  +FGRCPR +CK+Q VVP GI+D P KE VK+YCP+C  VY   +  G + LDG+FFGT+F HLFF+TF+RL+P+P   +Y P +FGFKIH SAKC ++
Sbjct:   27 MLCEVDRSYIEDGFNLYGLRQHVPNFQNVLDIILDNSV-DDNLDPMMAQAAYLLYGLIHARFITTSRGLEVMYKKYRTGDFGRCPRMLCKDQFVVPAGIYDHPNKEKVKVYCPKCGQVYGVPTNPGEQGLDGSFFGTTFPHLFFLTFNRLIPEPCTETYIPRVFGFKIHPSAKCARQ 202
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BLAST of mRNA_Ecto-sp13_S_contig6763.17684.1 vs. uniprot
Match: A0A835ZBJ6_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBJ6_9STRA)

HSP 1 Score: 221 bits (562), Expect = 4.080e-62
Identity = 114/182 (62.64%), Postives = 132/182 (72.53%), Query Frame = 1 
Query:    4 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQP-VVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVP-DPARSSYTPLIFGFKIHKSAKCMQRRLP 543
            MLCEVDRSYIED FNLYGLRHHF NFQ CL+IILD++AA+E +DP VAQSAFMLYG+IHARFIVT RGL+AM KKYRLAEFGRCPR +C++Q  V P G                         P+G EPLDGAFFGTSFAHLF ++FDR +P D  R SYTP IFGFK++K+A    R+ P
Sbjct:    1 MLCEVDRSYIEDSFNLYGLRHHFPNFQECLNIILDKSAAEECRDPKVAQSAFMLYGLIHARFIVTTRGLDAMLKKYRLAEFGRCPRMLCRDQVYVAPAG-------------------------PHGEEPLDGAFFGTSFAHLFIMSFDRWMPADVTRDSYTPRIFGFKVNKAAAPTPRKNP 157
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BLAST of mRNA_Ecto-sp13_S_contig6763.17684.1 vs. uniprot
Match: B8BZE6_THAPS (Casein kinase II subunit beta (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZE6_THAPS)

HSP 1 Score: 203 bits (517), Expect = 1.740e-58
Identity = 96/174 (55.17%), Postives = 121/174 (69.54%), Query Frame = 1 
Query:    4 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDP--ARSSYTPLIFGFKIHKSA 519
            M CEV+R+YIEDGFNLYGLR   +NF  CLD+ILDR   D+  D  + QSA  LYG+IHAR+IVTA GL++MY KY   EFG CP   C  QPV+PVG+ DE   + VK++CP+C  VY          +DGA FGT+F HLF +TF+ LVPDP  + S+Y P +FGF++HKSA
Sbjct:    9 MFCEVERAYIEDGFNLYGLRACVSNFSDCLDLILDRIGPDDSDDSHLTQSACTLYGLIHARYIVTAHGLDSMYNKYASKEFGTCPLVQCNGQPVLPVGVKDEIGVDTVKIFCPKCKSVYQPPPIRTRSTVDGAAFGTTFPHLFLMTFNNLVPDPLPSDSAYIPRVFGFRVHKSA 182
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BLAST of mRNA_Ecto-sp13_S_contig6763.17684.1 vs. uniprot
Match: A0A6U4CN35_9STRA (Casein kinase II subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CN35_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.070e-57
Identity = 99/181 (54.70%), Postives = 130/181 (71.82%), Query Frame = 1 
Query:   10 CEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDP--VVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPL-DGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHKSAK--CMQRR 537
            CEVDRSYIEDGFNLYGLR++ +NF  CL +ILD T  D+  D    +  +A  LYG+IHARFI+T+ GLE M  K+   EFG CPR  CK QPVVP+G  D+ + ++VK +CP C D+Y+   P  G  L DGA+FG +FAHLFF+TF+ LVPDP+RS+Y P +FGFK+H S++  C+ +R
Sbjct:   29 CEVDRSYIEDGFNLYGLRNYVSNFMDCLHLILDDTPPDDGGDERRELLMNASRLYGLIHARFILTSAGLECMCSKFLAKEFGFCPRVHCKGQPVVPIGCSDDLEIDSVKCFCPLCGDIYSPPQPPDGSRLPDGAYFGRTFAHLFFMTFEDLVPDPSRSAYVPRVFGFKVHMSSRSLCVAKR 209
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BLAST of mRNA_Ecto-sp13_S_contig6763.17684.1 vs. uniprot
Match: A0A835ZJS8_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS8_9STRA)

HSP 1 Score: 201 bits (510), Expect = 5.250e-57
Identity = 97/179 (54.19%), Postives = 126/179 (70.39%), Query Frame = 1 
Query:    4 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEP-LDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHKSAKCMQRR 537
            M CEVDRSYIEDGFNLYGLR +  N   CLDIILDR   ++  + ++ QS++MLYG+IHAR+I+T  GLEAM KK+ + +FG CPR +C+   VVP+G+ DEPK E VKL+CP C DVY   +P   +  LDGA+FGT+FAHLF +T++   P  A+  Y P IFGF+IH+ A     R
Sbjct:   26 MFCEVDRSYIEDGFNLYGLRQYVPNITECLDIILDRVGPEDSDEDLL-QSSYMLYGLIHARYIITTNGLEAMRKKHAMQDFGCCPRMLCRASAVVPIGMRDEPKLEGVKLFCPSCQDVYAPWAPSSPQAQLDGAYFGTTFAHLFCMTYEITAPT-AKELYVPRIFGFRIHREASSTDTR 202
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BLAST of mRNA_Ecto-sp13_S_contig6763.17684.1 vs. uniprot
Match: A0A7S0GAP8_9STRA (Casein kinase II subunit beta n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAP8_9STRA)

HSP 1 Score: 206 bits (524), Expect = 7.360e-57
Identity = 99/180 (55.00%), Postives = 127/180 (70.56%), Query Frame = 1 
Query:    4 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGE-----PLDGAFFGTSFAHLFFITFDRLVPD--PARSSYTPLIFGFKIHKSAK 522
            M CEV+RSYIEDGFNLYGLR   +NF  CLD+ILDR   D+  +  + QSA  LYG+IHAR+I+TA GL+AMY KY   EFG CP T C  QPV+PVG+ DE  +++VK++CP+C  VY+   PYGG       +DGA FGT+F HLF +TF  LVPD   A ++Y P +FGF++H SA+
Sbjct:   28 MFCEVERSYIEDGFNLYGLRASVSNFSDCLDLILDRIGPDDSDESKLTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLTQCTGQPVLPVGLRDEIGQDSVKIFCPKCQCVYHP--PYGGRRGGSGTVDGASFGTTFPHLFLMTFSNLVPDGLAADATYVPRVFGFRVHHSAR 205
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BLAST of mRNA_Ecto-sp13_S_contig6763.17684.1 vs. uniprot
Match: A0A448YXJ5_9STRA (Casein kinase II subunit beta n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXJ5_9STRA)

HSP 1 Score: 204 bits (518), Expect = 7.800e-57
Identity = 99/184 (53.80%), Postives = 123/184 (66.85%), Query Frame = 1 
Query:    4 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTV---------SPYGGEPLDGAFFGTSFAHLFFITFDRLVPDP--ARSSYTPLIFGFKIHKSAK 522
            M CEV+RSYIEDGFNLYGLR   +NF  CLD+ILDR   D+  D  + QSA  LYG+IHAR+I+TA GL+AMY KY   EFG CP   C  QPV+PVG+ DE   + VK++CP+C  VY+            P G   +DGA FGT+F HLF +TF  LVPDP  A S+Y P +FGF++H SA+
Sbjct:   28 MFCEVERSYIEDGFNLYGLRTCVSNFSDCLDLILDRIGPDDSDDSHLTQSACTLYGLIHARYIITAHGLDAMYNKYASKEFGTCPLVQCAGQPVLPVGLKDEMGADTVKIFCPKCQCVYHPPPVRSRSSHHGPAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPADSAYVPRVFGFRVHMSAR 211
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BLAST of mRNA_Ecto-sp13_S_contig6763.17684.1 vs. uniprot
Match: A0A1W0AB01_9STRA (Casein kinase II subunit beta n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AB01_9STRA)

HSP 1 Score: 199 bits (505), Expect = 7.790e-56
Identity = 91/175 (52.00%), Postives = 120/175 (68.57%), Query Frame = 1 
Query:   10 CEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHKSAKCMQR 534
            CE++ +YIED FNLYGLR    N+Q  L+IILD T  D P D  V   A  LYG+IHAR+I+T+ GL+AM KKYR AEFG CPR +C  QPVVP G++DEP+K  +K+YCP+C D+Y     +    +DGA+FG++F HLFF+T+  L P P+   Y P +FG+KIH+     QR
Sbjct:   30 CEINPAYIEDSFNLYGLRAMVPNYQDALNIILDLT--DIPYDDDVPSCAVELYGLIHARYIITSHGLDAMLKKYREAEFGYCPRALCDGQPVVPAGMYDEPRKAEMKVYCPKCRDLYTPAIDFESATIDGAYFGSTFPHLFFLTYSNLEPAPSTHLYVPRVFGYKIHRKGPNRQR 202
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6763.17684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSE5_ECTSI1.960e-17076.26Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
A0A6H5KX78_9PHAE3.740e-12570.83Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
A0A6V1P2G8_HETAK1.060e-7363.84Casein kinase II subunit beta n=1 Tax=Heterosigma ... [more]
A0A835ZBJ6_9STRA4.080e-6262.64Casein kinase II subunit beta n=1 Tax=Tribonema mi... [more]
B8BZE6_THAPS1.740e-5855.17Casein kinase II subunit beta (Fragment) n=1 Tax=T... [more]
A0A6U4CN35_9STRA2.070e-5754.70Casein kinase II subunit beta n=1 Tax=Phaeomonas p... [more]
A0A835ZJS8_9STRA5.250e-5754.19Casein kinase II subunit beta n=1 Tax=Tribonema mi... [more]
A0A7S0GAP8_9STRA7.360e-5755.00Casein kinase II subunit beta n=1 Tax=Proboscia in... [more]
A0A448YXJ5_9STRA7.800e-5753.80Casein kinase II subunit beta n=1 Tax=Pseudo-nitzs... [more]
A0A1W0AB01_9STRA7.790e-5652.00Casein kinase II subunit beta n=1 Tax=Thraustothec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6763contigEcto-sp13_S_contig6763:1511..7199 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score513.8
Seed ortholog evalue1.1e-142
Seed eggNOG ortholog2880.D7FSE5
Model size1860
KEGG koko:K03115
KEGG Pathwayko03008,ko04064,ko04137,ko04139,ko04310,ko04520,ko04712,ko05162,ko05168,ko05169,map03008,map04064,map04137,map04139,map04310,map04520,map04712,map05162,map05168,map05169
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.protein kinase regulator activity
EggNOG OGsCOG5041@1,KOG3092@2759
Ec32 ortholog descriptionCasein kinase II, regulatory subunit
Ec32 orthologEc-25_000900.1
Cds size1857
COG Functional cat.DKT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6763.17684.1prot_Ecto-sp13_S_contig6763.17684.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6763 1511..7196 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463929.8891027-CDS-Ecto-sp13_S_contig6763:1510..22131681463929.8891027-CDS-Ecto-sp13_S_contig6763:1510..2213Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6763 1511..2213 -
1681463929.9007187-CDS-Ecto-sp13_S_contig6763:2581..26551681463929.9007187-CDS-Ecto-sp13_S_contig6763:2581..2655Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6763 2582..2655 -
1681463929.916553-CDS-Ecto-sp13_S_contig6763:3307..33961681463929.916553-CDS-Ecto-sp13_S_contig6763:3307..3396Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6763 3308..3396 -
1681463929.9290252-CDS-Ecto-sp13_S_contig6763:3549..40311681463929.9290252-CDS-Ecto-sp13_S_contig6763:3549..4031Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6763 3550..4031 -
1681463929.9422026-CDS-Ecto-sp13_S_contig6763:4216..43401681463929.9422026-CDS-Ecto-sp13_S_contig6763:4216..4340Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6763 4217..4340 -
1681463929.9547958-CDS-Ecto-sp13_S_contig6763:5396..54931681463929.9547958-CDS-Ecto-sp13_S_contig6763:5396..5493Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6763 5397..5493 -
1681463929.9644158-CDS-Ecto-sp13_S_contig6763:6050..61221681463929.9644158-CDS-Ecto-sp13_S_contig6763:6050..6122Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6763 6051..6122 -
1681463929.9738073-CDS-Ecto-sp13_S_contig6763:6666..67701681463929.9738073-CDS-Ecto-sp13_S_contig6763:6666..6770Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6763 6667..6770 -
1681463929.9830997-CDS-Ecto-sp13_S_contig6763:7084..71961681463929.9830997-CDS-Ecto-sp13_S_contig6763:7084..7196Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6763 7085..7196 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463929.9925625-UTR-Ecto-sp13_S_contig6763:7196..71991681463929.9925625-UTR-Ecto-sp13_S_contig6763:7196..7199Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6763 7197..7199 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6763.17684.1

>prot_Ecto-sp13_S_contig6763.17684.1 ID=prot_Ecto-sp13_S_contig6763.17684.1|Name=mRNA_Ecto-sp13_S_contig6763.17684.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=619bp
MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQS
AFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIF
DEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRL
VPDPARSSYTPLIFGFKIHKSAKCMQRRLPHSTTAASSQQQQQQQQQQQQ
QLHSNGGNNGGVAAGSGAAAAAAAATNSSNSSSAPAHLRRGTAASAGGGA
GSGMTTTAGGAAGSASFAGSGANASGAPAGGAAAGGGGGSTGGKGVLWAG
GGGAGAGEGSGGSAVMSGKDGRDGVAGGGDNKRRQQERESRADGAAEAAG
QEGWGGSCGKGTRQGDGESSRGRAGDGSQDDSATSRATVTGGAGGGNTSN
NGTAGSRTERSKSPGGGGSSGRPPGSSAQQPGEGGRSGASDRAQSERQQQ
QQQQQQQRGGFLGGACSGPAVVSDGKSCGDKEGVGEEERGRRRAGSGGLA
ALAEAATKSEDGGDGKRATGPGSGSGSGGGGGGGGGGGSVGAEERLAAEE
AVVAATPVVERRTGSREIASVVKAGAGAGAGAGGGGGGGGGGGGGGSTAG
AGGSGGGAGRETKRMRVS*
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mRNA from alignment at Ecto-sp13_S_contig6763:1511..7199-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6763.17684.1 ID=mRNA_Ecto-sp13_S_contig6763.17684.1|Name=mRNA_Ecto-sp13_S_contig6763.17684.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5689bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6763:1511..7199- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTATGTTGTGCGAGGTTGACAGAAGCTACATCGAGGATGGGTTCAACCT
GTACGGACTGCGGCACCACTTCGCCAATTTCCAGGGCTGCCTGGACATAA
TCCTGGACCGAACTGGTGAGGAAGACCCCTCTTTTGGCTGTTGATCTCCA
CTTTCGCTTATTCCACGTCGCTGACTTTCGTTTTCTCTCCATGTCCAACA
GCACCCCCAGACGCCGCCGCCTCTGATATGTTTTATGCCCTCGTTGCAAA
CCGTGCTGTTATACACACCTCTCTTCACAATACCTTCTCGTTGAAGCCTA
CCTCGCACGACACATGATGGGGTTGGTGCATGGAAGAAGTACCACAACTT
TTTTTTTTCTTGTCTCCAAGGTCGTGCCTCCTCCCCCCTCCCCCACTCTG
TCGCTCGGTGCTCGTTTTTGTTTTCGAAGCTGCGGATGAGCCCCAAGACC
CGGTGGTGGCGCAGTCGGCCTTCATGCTCTACGGCATGATTCACGCTCGC
TTCATCGTCACCGCAAGGGGCCTCGAAGCGATGGTGTGTTGTAGCGTATA
GCCGCGCGGGTCGTCGTCTCGTCGTCTGTTGTTGCTCGTGCTAACGATGT
GTTGGTGTGATCTCTTGTCGAACGGGCGTGATACACTCCGCTGGCGTGAG
CGCTAACAGGTGGCTTGGTCCACCTACCGCTGTGAAAGATCGATTTCAAC
GATAAGTAGATTCAATTGAAACAATGAAATGTAGCGCTTTGTTCTCAAAC
ATCAGCAACATCAATGATTTTGTGTGACATAAAACAATCCGTTAGCCGTT
AGGACCCGCAACAGTTTTTTTTTCCAAACAGCGATGGGGAAGGGAAGAGC
GGCTGCAAGACAAGACTAACCGACGTGCCTCACCTAGAGCCGGGAAGGCC
TGGAGAACAGCATCTCATCTAGAGGGGGCGGGGTTCGCAGATTTTTTGTA
TGCGTAAGAAACGACCCCTCCCCCCCCACGCTTCGATTTATCATTTACAG
CATCATCCGAAAGAGGCAGCGTTCCTCAAAGATGTACCACATCGTCTGAC
TTTTTTTGTATTCCTCTTTTTTTGCAGTACAAGAAGTACCGCCTGGCGGA
GTTCGGGAGATGTCCAAGGACCATGTGCAAGAACCAACCGGTTGTTCCGG
TAAGAAGCTTCATGCGAAAATCGCTTTGAGTTATGAGTGTGGTGCATCCA
CGAGTGTGGCGCTTGGCACACGATGATCACGTCACTTCCTCTGCTTTTTG
ATGCCATGCGTTGGGTTTGTGGCGTTTGTGCTCAACGAGCAGCGTGGGTG
TTGTCTGGGGGCGCCTATTTACTGCACAACGAAAGTTCTGTTTGCGTCTG
TCTCGTGCCGATTAGCATGTGCTTGTACGTTTTTCAGCATGTACTTTGTT
TTGTTCCGTTCATGAGTGATTAGTTGCAACCCATTGTCTTCCTGTCTGTC
CCGGCTGTTTGTCTGTCTGTCTGTCTGTCTGTCTGCCTGTCTGTCTGTCT
GTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGT
CTTTCTGTCTGTCTGTCTGCTTGTCTGTCTGTCTGTCTGTCTATCTGTCC
GGTCTGTCTGTATCTGTCCGTTTTGTCTGCCTGCCTGCCTGTCTGCCTGC
CTACCTGTCATGTTTTTTGTCTGTATTTTCTGTGGCTCCCCTCCGAATCC
GTACAGGTGGGCATTTTCGACGAGCCGAAGAAGGAGGCGGTGAAGCTCTA
CTGCCCGCGGTGCTGCGACGTTTACAACACCGTCAGTCCCTACGGTGGTG
AACGTGAGTGACATGACACCCATCCGCGCCACTTCCCTCTCTAACCCCCC
ACAGGACGCAGGGAAGCCATTCACGCACCTCCAGGAAGGATGTCTTTTTT
GTCGAAGTACATCGTGATTTATCCATTTTTTTTAATCCGGCGGCACAGTT
TGGCCGCTCCGGTATTGTTATGTGTTGGTTTTCCCTTCGGCGCGTTCAAG
TTTTTTCCAGTCATTACCGCGCCAAGGAGGTACGCTCGGTCCTGCAAATG
GCGTAGATTCTGGCAAGGCTTTCATTCGGTCACCTTCTGGTTGTGAAACT
GTCTTGTGACAACATCAACACAATACCACACGGTGGAGGAGCCCTCCTAC
TGTAGCACTGACGAGGCGTTTTCCCAACCACTTTCGACTTTTTCAATTTG
TCCACAGTTGTTGTTGCCACTGTGGGAACCCTCCGAAATGGTGAATTATG
GCGAAGTCCCCAATTCCGCCGCGTTTTTGCTTTGCTCTTCGCGTAGCGGC
CGGTCCATGGAAGCCATGTCGACCAGGGTCATGTTTATTCGGTTAACGTT
TTTGATCGAAGCGTCGCTTTCGAGCTGACCGACGACCAGATTGCTGGTTC
GACTCAGTGGTCGTATGTATATGCATTTTTCTGGCAAACAACGCGGGTGC
CCGACAGGGGGGGGGGGGGGGGGAAGATTACGTTAAAGATTCCATCCAAC
CTACCAACTGGATATGGTTGGCCGCAAAACAAGACTCCACCTCCATGTAG
TTTTGCTCCTGGAATCTCCATTTTGCAAGCTCGCGCTTTGTTTCCATACG
CACGATGTTTCAATACGTTTTCAGGTTGGTCGAAACTTCACACTTTCACA
GGGTTGGGACATTTCTGCTAGCTTCGGAATTGTTTTTTCTTGCTGGCTCC
TATTTTTTCACAATATGTAGTATGTGCAACCACAGAGAACTGCACTTTCG
AGGTATTAGTTCAGCAGTCGCACGGTATGTATTGGAAGTCTTCGCAGTGA
GCGGGAGAATAGCCAGATGCTGGGCTAATTTTCTTCCTTCTTTTTCTTTT
CTTTTGCAGCGTTGGATGGCGCATTCTTCGGCACCTCCTTCGCACACCTA
TTCTTCATCACGTTCGACAGGCTCGTGCCGGACCCTGCTAGGTCTAGCTA
CACCCCCCTCATCTTCGGGTTCAAGATTCACAAGTGAGTGCAGCGGCCAG
GGGTATCCTTCAATAGTCGTGCGGTCCCTAGTCGTGCGAGGGACTGGTGT
CTCTGTGTGTGCCTTTGTTACTTGCATTGACCGCGCTAACCGCCTGACCG
ATAAACGTGTGTGGTGTCTCTACCTATCTCTGATGATGAACCCTTACCCC
CTTCAACCCCCCTCTCAGATCCGCCAAGTGCATGCAGCGTCGACTTCCGC
ACTCCACCACAGCCGCCTCCTCGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCTACACTCCAACGGCGGCAACAATGGCGGAGTTGCCGC
CGGTTCCGGCGCTGCCGCCGCCGCCGCCGCCGCGACGAACTCATCCAACT
CTTCCTCGGCCCCGGCGCACCTCCGCAGAGGCACCGCAGCATCAGCCGGG
GGGGGTGCGGGTAGCGGGATGACTACCACAGCGGGGGGCGCTGCGGGATC
GGCGTCTTTCGCGGGGTCAGGAGCTAACGCAAGTGGCGCTCCCGCGGGCG
GCGCTGCAGCCGGGGGCGGCGGCGGCAGCACGGGGGGGAAGGGGGTGTTG
TGGGCCGGCGGTGGCGGCGCGGGGGCCGGGGAAGGCTCCGGGGGCTCCGC
GGTCATGAGCGGCAAGGACGGGCGGGACGGGGTGGCCGGCGGCGGTGACA
GTGAGAAGAGCAGCGGGAGAGGAAAGAAGAAGAAGCGGAGGAGCGGGAGG
TCGGGCGAGTCGAGGGCGGGGGTGGGGGCGAGCGCGGAAACGGTGGGCGG
GAGGAAGGGCGGGGGGGGCGGGGGGGGTGGGGGGGGCGGGAGTGGCCGCA
AAGACAAGCGACGCCAGCAGGAGAGGGAGTCCCGCGCAGACGGGGCGGCG
GAGGCGGCGGGGCAGGAGGGCTGGGGCGGCTCGTGCGGGAAGGTGTGTGG
AAACGTGGGTGTGGAAAGCGTCGGTTCAGCGTGCGTGTGCCTTTAGTTTT
AGCATAGGCCGCACCAATTGGCTGACCAACGAAGAGAAACCAGTGTCGGT
GCGCCCAAGAACGGGAAACGCCTCCAAAGGTCATGATACGGCAGTGGATA
CCCACTCGGACCAGACTACGTACAGCCAGCTTCGGGTACCTTCCTTTGGA
ATGGGGGTCCCGGCGATACATGACGTGTGATATTGCGTCATATCAGCTGT
TTCGAGAAGGAAATTCAGGTTGTTCGTGTGTTTTTTTTTGTTCACGCCGT
GGATATGTTATCCCTGAATCTGCTGCCGCATGGTGCGCGTCAAAATATTC
GGCTGAAGGGTTGAGAATGAAAATCGGCCGGGACAGGTTTTGTGGTCTTG
ATAAGCTGCTTGTGATTGGTGGCTTTGGACGAAGTTTGGCTCACTGGATG
ATTGCAGGTCAGCCCCGTTACAGCACACAAGAGGGAGGTATTCTAAAGCT
TCAATTGGCATTTTCACCCAGCAGCTACGCTGAAATCTGGTTGTCGTTGC
TACCGTGCTTGATGTTGGTGTTGCTAAGATTTGTTCCCGCACGCACCATG
GCTGTTCTTGGTGGTGGGCGCTTGTTGTTTGGTCACGTTCGAAGGGCACG
AGGCAAGGAGACGGGGAGAGCAGCAGGGGGAGGGCGGGAGACGGTAGCCA
GGACGACTCTGCAACAAGGTGAGTCGCTGCTTTTAGTACTGTTGCGGTCG
TCATCGTCGTTTTGCTGCCGCGATACCACGATTGTCAGGGTTGGGATTGC
ACATTTGCTCGGCCTCGCCAGCCCCTCGCCAGTATATCTTTTCTAGTTCT
TTACGTAGAGAATTGGAGCTGGTGAGAAGATTGTGTTCGTCAACTTAATA
TGTCACGCTCACCGTGTACCTGTCTTTGTAGTGCGGCAGTACCTCTGTCG
TACAACTGTTGGACCGGCGTGGCGGCGGCAGTGGGATGTAAAACACTGCT
GCAGGGTGCGGTGAACACGCAGGCCGACTCACCCATTGAACGAACGAACT
TACCCCATATCATGGTATGGCGTTTCGCCTCTACAGCCGAGCGACAGTGA
CTGGTGGAGCTGGCGGCGGGAACACCTCCAACAACGGTACTGCCGGCTCG
CGCACGGAGAGATCCAAGTCTCCTGGCGGCGGCGGCAGCAGCGGTCGCCC
CCCCGGCTCTTCGGCCCAACAGCCCGGCGAAGGCGGGCGCAGCGGGGCGA
GCGATCGGGCCCAGTCAGAGCGGCAGCAGCAGCAGCAGCAGCAACAACAA
CAACGAGGCGGTTTTCTCGGGGGGGCGTGCTCGGGACCGGCGGTGGTGTC
CGATGGGAAGAGCTGCGGAGATAAGGAAGGGGTGGGGGAAGAGGAGAGGG
GGCGGCGCCGGGCCGGGAGCGGGGGCCTGGCTGCCCTGGCAGAGGCGGCC
ACGAAAAGCGAGGACGGCGGGGATGGGAAGAGAGCAACAGGCCCGGGCAG
CGGCAGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGAGGCAGCG
TTGGGGCGGAGGAGAGATTGGCGGCGGAGGAGGCAGTGGTGGCGGCAACG
CCGGTCGTGGAGCGTAGAACGGGGTCGAGGGAGATAGCCTCGGTCGTGAA
GGCTGGAGCCGGGGCTGGGGCTGGGGCTGGAGGAGGCGGCGGCGGTGGTG
GCGGCGGCGGGGGGGGTGGGTCCACCGCTGGCGCGGGCGGAAGCGGTGGC
GGCGCTGGCCGGGAGACAAAACGCATGAGGGTTTCGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6763:1511..7199-

>mRNA_Ecto-sp13_S_contig6763.17684.1 ID=mRNA_Ecto-sp13_S_contig6763.17684.1|Name=mRNA_Ecto-sp13_S_contig6763.17684.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1857bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6763:1511..7199- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGTGCGAGGTTGACAGAAGCTACATCGAGGATGGGTTCAACCTGTA
CGGACTGCGGCACCACTTCGCCAATTTCCAGGGCTGCCTGGACATAATCC
TGGACCGAACTGCTGCGGATGAGCCCCAAGACCCGGTGGTGGCGCAGTCG
GCCTTCATGCTCTACGGCATGATTCACGCTCGCTTCATCGTCACCGCAAG
GGGCCTCGAAGCGATGTACAAGAAGTACCGCCTGGCGGAGTTCGGGAGAT
GTCCAAGGACCATGTGCAAGAACCAACCGGTTGTTCCGGTGGGCATTTTC
GACGAGCCGAAGAAGGAGGCGGTGAAGCTCTACTGCCCGCGGTGCTGCGA
CGTTTACAACACCGTCAGTCCCTACGGTGGTGAACCGTTGGATGGCGCAT
TCTTCGGCACCTCCTTCGCACACCTATTCTTCATCACGTTCGACAGGCTC
GTGCCGGACCCTGCTAGGTCTAGCTACACCCCCCTCATCTTCGGGTTCAA
GATTCACAAATCCGCCAAGTGCATGCAGCGTCGACTTCCGCACTCCACCA
CAGCCGCCTCCTCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCTACACTCCAACGGCGGCAACAATGGCGGAGTTGCCGCCGGTTCCGG
CGCTGCCGCCGCCGCCGCCGCCGCGACGAACTCATCCAACTCTTCCTCGG
CCCCGGCGCACCTCCGCAGAGGCACCGCAGCATCAGCCGGGGGGGGTGCG
GGTAGCGGGATGACTACCACAGCGGGGGGCGCTGCGGGATCGGCGTCTTT
CGCGGGGTCAGGAGCTAACGCAAGTGGCGCTCCCGCGGGCGGCGCTGCAG
CCGGGGGCGGCGGCGGCAGCACGGGGGGGAAGGGGGTGTTGTGGGCCGGC
GGTGGCGGCGCGGGGGCCGGGGAAGGCTCCGGGGGCTCCGCGGTCATGAG
CGGCAAGGACGGGCGGGACGGGGTGGCCGGCGGCGGTGACAACAAGCGAC
GCCAGCAGGAGAGGGAGTCCCGCGCAGACGGGGCGGCGGAGGCGGCGGGG
CAGGAGGGCTGGGGCGGCTCGTGCGGGAAGGGCACGAGGCAAGGAGACGG
GGAGAGCAGCAGGGGGAGGGCGGGAGACGGTAGCCAGGACGACTCTGCAA
CAAGCCGAGCGACAGTGACTGGTGGAGCTGGCGGCGGGAACACCTCCAAC
AACGGTACTGCCGGCTCGCGCACGGAGAGATCCAAGTCTCCTGGCGGCGG
CGGCAGCAGCGGTCGCCCCCCCGGCTCTTCGGCCCAACAGCCCGGCGAAG
GCGGGCGCAGCGGGGCGAGCGATCGGGCCCAGTCAGAGCGGCAGCAGCAG
CAGCAGCAGCAACAACAACAACGAGGCGGTTTTCTCGGGGGGGCGTGCTC
GGGACCGGCGGTGGTGTCCGATGGGAAGAGCTGCGGAGATAAGGAAGGGG
TGGGGGAAGAGGAGAGGGGGCGGCGCCGGGCCGGGAGCGGGGGCCTGGCT
GCCCTGGCAGAGGCGGCCACGAAAAGCGAGGACGGCGGGGATGGGAAGAG
AGCAACAGGCCCGGGCAGCGGCAGCGGCAGCGGCGGCGGCGGCGGCGGCG
GCGGCGGTGGAGGCAGCGTTGGGGCGGAGGAGAGATTGGCGGCGGAGGAG
GCAGTGGTGGCGGCAACGCCGGTCGTGGAGCGTAGAACGGGGTCGAGGGA
GATAGCCTCGGTCGTGAAGGCTGGAGCCGGGGCTGGGGCTGGGGCTGGAG
GAGGCGGCGGCGGTGGTGGCGGCGGCGGGGGGGGTGGGTCCACCGCTGGC
GCGGGCGGAAGCGGTGGCGGCGCTGGCCGGGAGACAAAACGCATGAGGGT
TTCGTGA
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