prot_Ecto-sp13_S_contig6762.17683.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6762.17683.1
Unique Nameprot_Ecto-sp13_S_contig6762.17683.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6762.17683.1 vs. uniprot
Match: D7FZV2_ECTSI (EsV-1-157 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV2_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 3.250e-12
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0 
Query:    1 MIELGVDVNGADWSGFTPLHWTSDKITVDLL 31
            MIELGVDVNGADWSGFTPLHWTSDK TVDLL
Sbjct:   56 MIELGVDVNGADWSGFTPLHWTSDKTTVDLL 86
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6762.17683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZV2_ECTSI3.250e-1296.77EsV-1-157 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..51
e-value: 1.3E-7
score: 33.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..43
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..43
score: 9.649

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6762contigEcto-sp13_S_contig6762:5212..5876 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6762.17683.1mRNA_Ecto-sp13_S_contig6762.17683.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6762 2527..6688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6762.17683.1 ID=prot_Ecto-sp13_S_contig6762.17683.1|Name=mRNA_Ecto-sp13_S_contig6762.17683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
MIELGVDVNGADWSGFTPLHWTSDKITVDLLIDAGANIEAQEGEGAAAGG
VGGERQRRVGSWGGVGAGRGVGKGVERIFRMIVGYL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom