prot_Ecto-sp13_S_contig12081.1768.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12081.1768.1
Unique Nameprot_Ecto-sp13_S_contig12081.1768.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length480
Homology
BLAST of mRNA_Ecto-sp13_S_contig12081.1768.1 vs. uniprot
Match: A0A6H5JG89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG89_9PHAE)

HSP 1 Score: 806 bits (2083), Expect = 7.040e-290
Identity = 419/480 (87.29%), Postives = 435/480 (90.62%), Query Frame = 0
Query:    1 MIHHRRVAQPDGGSDKQLASPPHHSPPRGAGASTSGFAGRTRTAVTEHGIPDGAMHTAVDGNRPAPAAELAKGHCCSAPANELPSGTSGAGDGVHRERYWLKGRRLVGKTILGTLAAGTLTLLIASEGLTTMLGSPARSPPPLYHRHRTVFDSAAQHTGRYDYGGRDATGRDAGGAAGTTAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVXXXXXXXXXXGNPSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWEVVFASNVGRHKPFPSAGPAESPWEPSAFNFYKASPLEFVLSYTPSFRYEQEIATAAAAAAGRRTQAEDNGGVSVDTDAKVAGSTAAKSARGAAAVGEGKAVAITSALRGGGVGLRMKLDGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYPNSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 480
            MIHHRRVAQP+GGSD Q AS PHHSP RGAGAS+S FAGRTRTAVTEHGIP GA HTAVDGNRPAPA ELA+GHCCSAPANE   GTSGAGDGVHRERYW  GRRLVGKTILGTLAAGTLTLL+AS+GLTTMLGS A+SP PL HRHRTVFDSAAQ TGRYDYGGRDATGR AGGAAGT AWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGV          G+PSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWEVVFASNVGRHKPFP AGPAESPW+P AFNFYKASPLEFVLSYTPSFRYE+EIA AA    GRRTQAEDNGGV V+ D + AGS AAK+ARG+AAVGEGK V ITSA RGGGVGL+M +DGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYP+SHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA
Sbjct:    1 MIHHRRVAQPEGGSDTQSASRPHHSPRRGAGASSSSFAGRTRTAVTEHGIPHGATHTAVDGNRPAPAVELAEGHCCSAPANEPAGGTSGAGDGVHRERYWPNGRRLVGKTILGTLAAGTLTLLVASDGLTTMLGSSAKSPRPLSHRHRTVFDSAAQQTGRYDYGGRDATGRGAGGAAGTAAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAAAAAAA---GHPSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWEVVFASNVGRHKPFPPAGPAESPWDPYAFNFYKASPLEFVLSYTPSFRYEREIA-AAXXXXGRRTQAEDNGGVLVEADVEAAGSAAAKAARGSAAVGEGKTVTITSARRGGGVGLQMNVDGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 476          
BLAST of mRNA_Ecto-sp13_S_contig12081.1768.1 vs. uniprot
Match: D7G939_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G939_ECTSI)

HSP 1 Score: 623 bits (1606), Expect = 9.090e-219
Identity = 333/374 (89.04%), Postives = 345/374 (92.25%), Query Frame = 0
Query:  113 GTLAAGTLTLLIASEGLTTMLGSPARSPPPLYHRHRTVFDSAAQHTGRYDYGGRDATGRDAGGAAGTTAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVXXXXXXXXXXGNPSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWEVVFASNVGRHKPFPSAGPAESPWEPSAFNFYKASPLEFVLSYTPSFRYEQEIATAAAAAA-------GRRTQAEDNGGVSVDTDAKVAGSTAAKSARGAAAVGEGKAVAITSALRGGGVGLRMKLDGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYPNSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQ 479
            G L++GTLTLL+ASEGLTT+LGSPARSPPPL HRHRTVFDSAAQ TGRYDYGGRDATGRDAGGAAG  AWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGV XXXXXX   G+PSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGW VVFASNVGRHKPFP AGPAESPW+PSAFNFYKASPLEFVLSYTPSFRY +EI  AA+          GRRTQA+DN GVSV+TDAK AGSTAAK+ARGAA VGEGKAVAITSALRGGGVGL MKLDGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGY +SHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQ
Sbjct:   18 GILSSGTLTLLVASEGLTTILGSPARSPPPLSHRHRTVFDSAAQQTGRYDYGGRDATGRDAGGAAGAAAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAXXXXXXA--GHPSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWGVVFASNVGRHKPFPPAGPAESPWDPSAFNFYKASPLEFVLSYTPSFRYGREIPEAASXXXXXXXXXXGRRTQAKDNDGVSVETDAKAAGSTAAKAARGAAEVGEGKAVAITSALRGGGVGLPMKLDGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYAHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQ 389          
BLAST of mRNA_Ecto-sp13_S_contig12081.1768.1 vs. uniprot
Match: A0A6H5JHT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT3_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 4.350e-27
Identity = 68/132 (51.52%), Postives = 80/132 (60.61%), Query Frame = 0
Query:  132 MLGSPARSPPPLYHRHRTVFDSAAQHTGRYDYGGRDATGRDAGGAAGT-TAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVXXXXXXXXXXGNPSLPQVLRWFWNLKHERGVLAYEVAELNE 262
            MLGS A +PPPL  RHRT FDSAAQ  GRYD GG DATG DAGGAAG+ +AWIET   C+G  +      E  ++L  +                         S PQVLRWFW+L+HERGVLAY+VAEL+E
Sbjct:    1 MLGSSANTPPPLSRRHRTAFDSAAQQAGRYDGGGDDATGHDAGGAAGSASAWIET---CSGVRE------ETAAMLMLLD----------------------TLSCPQVLRWFWSLEHERGVLAYDVAELSE 101          
BLAST of mRNA_Ecto-sp13_S_contig12081.1768.1 vs. uniprot
Match: A0A2T7DD07_9POAL (Uncharacterized protein n=8 Tax=Paniceae TaxID=147428 RepID=A0A2T7DD07_9POAL)

HSP 1 Score: 60.8 bits (146), Expect = 2.470e-6
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 0
Query:  401 GEASTASPPQDAVLVNIRPVGPVSLLLTPGYPNSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 480
            G   T S    A+L+N+ P+G   +LLTP   +   QR    S  +A+  A   R +P FR+G+NS G  A++NHLHFQA
Sbjct:  158 GAPDTISASSSAILINVSPIGYCHVLLTPKIQDCLPQRIDEESFLIAMYIAREAR-NPFFRVGYNSLGGFATINHLHFQA 236          
BLAST of mRNA_Ecto-sp13_S_contig12081.1768.1 vs. uniprot
Match: A0A6V2QQN2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QQN2_HETAK)

HSP 1 Score: 59.7 bits (143), Expect = 4.830e-6
Identity = 36/71 (50.70%), Postives = 40/71 (56.34%), Query Frame = 0
Query:  412 AVLVNIRPVGPVSLLLTPGYPNSHNQRATAYSLAVAIDFAEALRV---DPGFRLGFNSAGSSASVNHLHFQ 479
            AV  N RP G +  LL P Y     Q A   +LAVA+ F  AL       G RLGFNS G+ ASVNHLHFQ
Sbjct:  279 AVYANARPFGRLCFLLLPFYGRDRPQVADGSALAVALHFMGALAARGGGGGVRLGFNSLGACASVNHLHFQ 349          
BLAST of mRNA_Ecto-sp13_S_contig12081.1768.1 vs. uniprot
Match: A0A1B6Q7Q1_SORBI (Uncharacterized protein n=9 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6Q7Q1_SORBI)

HSP 1 Score: 59.7 bits (143), Expect = 5.540e-6
Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 0
Query:  401 GEASTASPPQDAVLVNIRPVGPVSLLLTPGYPNSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 480
            G   T S    A+L+N+ P+G    LLTP   +   QR    S  +A+  A   R +P FR+G+NS G  A++NHLHFQA
Sbjct:  153 GVPDTVSASSSAILINVSPIGYCHALLTPKIQDCLPQRIDQESFLIAMYVAREAR-NPFFRVGYNSLGGFATINHLHFQA 231          
BLAST of mRNA_Ecto-sp13_S_contig12081.1768.1 vs. uniprot
Match: A0A0E0JSB5_ORYPU (Uncharacterized protein n=9 Tax=Oryza TaxID=4527 RepID=A0A0E0JSB5_ORYPU)

HSP 1 Score: 58.9 bits (141), Expect = 7.860e-6
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 0
Query:  402 EASTASPPQDAVLVNIRPVGPVSLLLTPGYPNSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 480
            +A  ASP   A+L+N+ P+G   +LL P   +   QR    S  +A+  A   R DP FR+G+NS G  A++NHLHFQA
Sbjct:  100 DAVAASP--SAILINVSPIGYCHVLLIPRIQDCLPQRVDKESFLLAMYVAREAR-DPFFRVGYNSLGGFATINHLHFQA 175          
BLAST of mRNA_Ecto-sp13_S_contig12081.1768.1 vs. uniprot
Match: A0A368REI1_SETIT (Uncharacterized protein n=4 Tax=Setaria TaxID=4554 RepID=A0A368REI1_SETIT)

HSP 1 Score: 58.5 bits (140), Expect = 1.350e-5
Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 0
Query:  405 TASPPQDAVLVNIRPVGPVSLLLTPGYPNSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 480
            T S    A+L+N+ P+G   +LLTP   +   QR    S  +A+  A   R +P FR+G+NS G  A++NHLHFQA
Sbjct:  162 TVSSSSSAILINVSPIGYCHVLLTPQIQDCLPQRIDHESFLMAMYVAREAR-NPFFRVGYNSLGGFATINHLHFQA 236          
BLAST of mRNA_Ecto-sp13_S_contig12081.1768.1 vs. uniprot
Match: A0A8J5R971_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5R971_ZIZPA)

HSP 1 Score: 57.8 bits (138), Expect = 1.700e-5
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0
Query:  405 TASPPQDAVLVNIRPVGPVSLLLTPGYPNSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 480
            T +    A+L+N+ P+G   +LL P   +   QR    S  +A+  A   R DP FR+G+NS G  A++NHLHFQA
Sbjct:  127 TVAASHSAILINVSPIGYCHVLLIPQIQDCLPQRVDRESFLLAMYVAREAR-DPFFRVGYNSLGGFATINHLHFQA 201          
BLAST of mRNA_Ecto-sp13_S_contig12081.1768.1 vs. uniprot
Match: A0A835FGV0_9POAL (Uncharacterized protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835FGV0_9POAL)

HSP 1 Score: 57.4 bits (137), Expect = 2.760e-5
Identity = 32/80 (40.00%), Postives = 45/80 (56.25%), Query Frame = 0
Query:  401 GEASTASPPQDAVLVNIRPVGPVSLLLTPGYPNSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 480
            G   T S    A+L+N+ P+G   +LLTP   +   QR    S  +A+  A   R +  FR+G+NS G  A++NHLHFQA
Sbjct:  117 GAPDTISASSSAILINVSPIGYCHVLLTPKIQDCLPQRIDQESFLIAMYVAREAR-NSFFRVGYNSLGGFATINHLHFQA 195          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12081.1768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JG89_9PHAE7.040e-29087.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G939_ECTSI9.090e-21989.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHT3_9PHAE4.350e-2751.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2T7DD07_9POAL2.470e-641.25Uncharacterized protein n=8 Tax=Paniceae TaxID=147... [more]
A0A6V2QQN2_HETAK4.830e-650.70Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1B6Q7Q1_SORBI5.540e-641.25Uncharacterized protein n=9 Tax=Andropogoneae TaxI... [more]
A0A0E0JSB5_ORYPU7.860e-643.04Uncharacterized protein n=9 Tax=Oryza TaxID=4527 R... [more]
A0A368REI1_SETIT1.350e-542.11Uncharacterized protein n=4 Tax=Setaria TaxID=4554... [more]
A0A8J5R971_ZIZPA1.700e-540.79Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
A0A835FGV0_9POAL2.760e-540.00Uncharacterized protein n=2 Tax=Digitaria exilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026506GDP-L-galactose/GDP-D-glucose phosphorylasePANTHERPTHR20884FAMILY NOT NAMEDcoord: 401..480
NoneNo IPR availablePANTHERPTHR20884:SF8GDP-D-GLUCOSE PHOSPHORYLASE 1coord: 401..480
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..480
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..105
NoneNo IPR availableTMHMMTMhelixcoord: 106..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12081contigEcto-sp13_S_contig12081:412..5168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12081.1768.1mRNA_Ecto-sp13_S_contig12081.1768.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12081 412..5168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12081.1768.1 ID=prot_Ecto-sp13_S_contig12081.1768.1|Name=mRNA_Ecto-sp13_S_contig12081.1768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=480bp
MIHHRRVAQPDGGSDKQLASPPHHSPPRGAGASTSGFAGRTRTAVTEHGI
PDGAMHTAVDGNRPAPAAELAKGHCCSAPANELPSGTSGAGDGVHRERYW
LKGRRLVGKTILGTLAAGTLTLLIASEGLTTMLGSPARSPPPLYHRHRTV
FDSAAQHTGRYDYGGRDATGRDAGGAAGTTAWIETVAGCTGPEDGFVYGG
EAGSVLTFVRKGREDGGDSGVAAAAAAAAAAGNPSLPQVLRWFWNLKHER
GVLAYEVAELNERRDVGQETGWEVVFASNVGRHKPFPSAGPAESPWEPSA
FNFYKASPLEFVLSYTPSFRYEQEIATAAAAAAGRRTQAEDNGGVSVDTD
AKVAGSTAAKSARGAAAVGEGKAVAITSALRGGGVGLRMKLDGVAPAVGC
GEASTASPPQDAVLVNIRPVGPVSLLLTPGYPNSHNQRATAYSLAVAIDF
AEALRVDPGFRLGFNSAGSSASVNHLHFQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026506GDPGP