mRNA_Ecto-sp13_S_contig676.17678.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig676.17678.1 vs. uniprot
Match: A0A6H5KGP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP9_9PHAE) HSP 1 Score: 929 bits (2402), Expect = 0.000e+0 Identity = 480/531 (90.40%), Postives = 501/531 (94.35%), Query Frame = 1
Query: 91 MSLEATAATMARRKRPRVLALLTAAFGVLPFATGFGLSSVASQDAAIRSPSLAPDGALVSTSALERLARCGTQHQRQQQPRGGGGRRMHEITCRVKTPRRYGSADWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARKIWGGLINQCRNIARLSTVALGPDSPDWLEMKEYLRLFPFLLKQHLQDERDDAEMDWSRLPESTVARLQEDPNPPLYCCQIMMEILARACTEGGAAQSPGGRVPHYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRLTDTSTVGRCPGAAAPQLPGTQGGGPGMMMHPSSYREVGLPSVDTGLAENRGGVDSKNNXXXXXXXXXXXXTINGYASGVNNGRDMGERNGFVGSQQQKQVGRGSRGAKSGSPSKVDKLSKCWKGGPDDDII 1683
MSLEAT AT ARRKRPRVLALLTAAFGVLPFATGFGLSS ASQDAAIRSPS+A DGALV TSALERLARCGTQH+RQQQPR GGGRRMHEITCRVKTPRRYGSADWF NI+NLPKSRLLYNIKEHL YNTAFAF VSM+HYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEAR+IWGGLINQCRNIARLSTVALGPDSP+WLEMKEYLRLFPFLLKQHLQDER+DAEMDWSRLPE TVARLQEDPNPPLYCCQIMMEILARAC+EG AAQSPGGRVP +TSVMYRVQIEEGLSFLVDALGKCERI+TTPVPRGYSRHTSRFLTVYGFTLP+VLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRLT+ STVGR PGAAAPQLPG +G G GMM+HPSSY+EVG+P VDT LA+NRGGVDSKNN XXXXXXXXXX TINGYASGVNNGRDM ERNG GSQQQKQVG S GA+ G PSKVDKLSKCWKG PD+D++
Sbjct: 1 MSLEATTATAARRKRPRVLALLTAAFGVLPFATGFGLSSFASQDAAIRSPSIASDGALVPTSALERLARCGTQHRRQQQPRAGGGRRMHEITCRVKTPRRYGSADWFENIRNLPKSRLLYNIKEHLLYNTAFAFFVSMIHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARQIWGGLINQCRNIARLSTVALGPDSPEWLEMKEYLRLFPFLLKQHLQDERNDAEMDWSRLPEITVARLQEDPNPPLYCCQIMMEILARACSEGKAAQSPGGRVPDFTSVMYRVQIEEGLSFLVDALGKCERILTTPVPRGYSRHTSRFLTVYGFTLPLVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRLTEKSTVGRRPGAAAPQLPGARGAGAGMMIHPSSYQEVGMPLVDTSLADNRGGVDSKNNGXXXXXXXXXX-TINGYASGVNNGRDMSERNGHGGSQQQKQVGGESSGAEKGPPSKVDKLSKCWKGDPDNDVV 530
BLAST of mRNA_Ecto-sp13_S_contig676.17678.1 vs. uniprot
Match: D8LQQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ4_ECTSI) HSP 1 Score: 562 bits (1448), Expect = 3.900e-197 Identity = 269/275 (97.82%), Postives = 273/275 (99.27%), Query Frame = 1
Query: 403 DWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARKIWGGLINQCRNIARLSTVALGPDSPDWLEMKEYLRLFPFLLKQHLQDERDDAEMDWSRLPESTVARLQEDPNPPLYCCQIMMEILARACTEGGAAQSPGGRVPHYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDP 1227
DWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEAR+IWGGLINQCRNIARLSTVALGPDSP+WLEMKEYLRL+PFLLKQHLQDERDDAEMDWSRLPE TVARLQEDPNPPLYCCQIMMEILARAC+EGGAAQSPGGRVP YTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDP
Sbjct: 8 DWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARQIWGGLINQCRNIARLSTVALGPDSPEWLEMKEYLRLYPFLLKQHLQDERDDAEMDWSRLPEGTVARLQEDPNPPLYCCQIMMEILARACSEGGAAQSPGGRVPDYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDP 282
BLAST of mRNA_Ecto-sp13_S_contig676.17678.1 vs. uniprot
Match: A0A836CJD6_9STRA (Bestrophin, RFP-TM, chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD6_9STRA) HSP 1 Score: 341 bits (874), Expect = 4.780e-106 Identity = 168/312 (53.85%), Postives = 219/312 (70.19%), Query Frame = 1
Query: 361 ITCRVKTPRRYGSADWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARKIWGGLINQCRNIARLSTVALGPDSPDWLEMKEYLRLFPFLLKQHLQDERDDAEMDWSRLPESTVARLQEDPNPPLYCCQIMMEILARACTEGGAAQSPGGRVPHY-TSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRLT 1293
+ CR++ PR + S DW N+ NLPKSRLL +I+ HL +NTA+A VS+VH +TP+H D + + +PHSIM+ ALGLLLVFR+NA+Y+RFWEARK+WG + N RN+ARL+ + + + M EYL+ +P+LLKQHLQD RDD E W LPES + L +PNPPL C+ M +++ A G + GGR TSV YR+Q+E + LVD LG CERI+TTPVPR YSRHTSRFLTVY FTLP+VLV HT +TA VV +CWGL SIE IAY+IEQPFD +QL L +Y K+ +D+ R++
Sbjct: 242 LVCRLRAPRAFSSEDWLENVINLPKSRLLLSIQSHLLFNTAWAAAVSVVHGMTPEHYFDHVGDTTMPHSIMASALGLLLVFRSNASYDRFWEARKVWGCITNTTRNLARLTQSCMSDEDTTYRAMLEYLKAYPWLLKQHLQDTRDDTEFKWLALPESELELLLSNPNPPLMACERMTQVIQLAYGTCGGSGVNGGRCREDDTSVAYRLQMEVEVGKLVDFLGMCERILTTPVPRSYSRHTSRFLTVYLFTLPMVLVGHTGYWTAAVVGLICWGLLSIEGIAYYIEQPFDAGRQQLPLASYCQKMYMDITRIS 553
BLAST of mRNA_Ecto-sp13_S_contig676.17678.1 vs. uniprot
Match: H6WBA7_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA7_VAULI) HSP 1 Score: 303 bits (776), Expect = 4.160e-94 Identity = 153/321 (47.66%), Postives = 210/321 (65.42%), Query Frame = 1
Query: 361 ITCRVKTPRRYGSADWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARKIWGGLINQCRNIARLSTVALGPDSPDWLEM-KEYLRLFPFLLKQHLQDERDDAEMDW--SRLPESTVARLQEDPNPPLYCCQIMMEILARACTEGGAAQSPGGRVPHYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRLTDTSTVGR 1314
++ RV++ R + S DW NI+NLP S++ +I HL++NT +A ++ +H TPQH IDD H+S +P ++M+ AL LLL+FR NAAY+RFWE+RK+WG + N RN+ARL + + D + L + K+YLR +PFLLKQHLQ+ R+D E+DW +RLP+ +Q +PNPPL Q M +IL G P + P V YR++IEE ++ L D +G CERI+ TPVPR YSRHTSR LTV+ TLP+VLVPHTE T VV + WG+ SIE IAY IEQPFD QL ++ Y + +VD + + GR
Sbjct: 48 MSMRVQSARPFASNDWLDNIKNLPASKINKDITSHLWFNTGWAVLITCIHMFTPQHYIDDFHISTVPQTLMASALSLLLIFRNNAAYDRFWESRKVWGAITNTVRNLARLGKITI--DDEEVLSLYKDYLRSYPFLLKQHLQNTRNDEELDWLKARLPKYEFENIQSNPNPPLLVLQRMSQIL-------GTLFPPSSK-PSQAKVFYRIKIEECINLLSDCVGLCERILNTPVPRSYSRHTSRLLTVFLLTLPIVLVPHTEFGTPLVVLLMGWGMLSIEGIAYLIEQPFDATNNQLPMINYCNNLFRNVDFIVSEKSYGR 358
BLAST of mRNA_Ecto-sp13_S_contig676.17678.1 vs. uniprot
Match: A0A7S2V524_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V524_9STRA) HSP 1 Score: 239 bits (610), Expect = 9.940e-70 Identity = 139/325 (42.77%), Postives = 192/325 (59.08%), Query Frame = 1
Query: 373 VKTPRRYGSADWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARKIWGGLINQCRNIARLSTVALGPDSPDWLE-MKEYLRLFPFLLKQHLQDERDDAEMD-WSRLPESTVARLQEDPNPPLYCCQIMMEILARACTEGGAAQSPGGRVPHYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRLTDTSTVGRCPGAAAPQL 1341
V P R+ S DW N+ +P S +L NI+ H +N+A+A ++ +H Q II L+ +PH +M+ ALGLLLVFRTN+AY+RFWEARK+WG ++N R++ R+S +A+ D P + M + +FPFLLKQHLQ++ D E+ +S L ++ L D NPPL CQ M E+LA + T+ YR ++ ++ L+D LG CERI TPVP YSRHTSRFLT+Y TLP VLV T VV +CWGLFSIEEI ++IE+PFD + QL L T + ++ + L D + P P L
Sbjct: 60 VPAPPRFTSQDWAQNLWTIPSSTILKNIQSHALWNSAWAVVITYMH---SQGIIGTLNA--MPHQLMATALGLLLVFRTNSAYDRFWEARKVWGAVVNTTRDVVRVSLIAI--DDPYLRDRMVQLTMIFPFLLKQHLQNDPDLNEVKAFSTLTSEELSTLVLDANPPLRVCQRMGEVLALNYEDRD----------DITTFNYRTYLDNEITKLIDFLGMCERIKLTPVPLSYSRHTSRFLTLYMATLPFVLVNIAGNMTPFVVLGMCWGLFSIEEIGHYIEEPFDKKNAQLPLATISGNIQKALAALVDAADPSTVPTEMTPDL 367
BLAST of mRNA_Ecto-sp13_S_contig676.17678.1 vs. uniprot
Match: W7TTZ2_9STRA (Bestrophin-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTZ2_9STRA) HSP 1 Score: 235 bits (599), Expect = 7.770e-67 Identity = 136/319 (42.63%), Postives = 185/319 (57.99%), Query Frame = 1
Query: 337 GGGRRMHEITCRVKTPRRYGSADWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQ-HIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARKIWGGLINQCRNIARLSTVALGPDSPDWLEMKEYLRLFPFLLKQHLQDERDDAEMDWSRLPESTVARLQEDPNPPLYCCQIMMEILARACTEGGAAQSPGGRVPHYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRL 1290
G R +T + P+RY S+DW N+++L SR++ I HL +NTA+A V+ V+ PQ HI D +SP+PH +MS ALGLLLVFRTNAAY+RFWEARK+WG + N CRN+AR +AL D + F L+ HLQ E++ + LP +++ D PP C + ++ A + A S Y + +E+ + LV+ LG ERI+ TPVP YSRHTSRFL++Y TLP VLV E+FTAPV+ VCWGLFSIEEI + IE+PF +QL L++ + DV L
Sbjct: 136 GCRRAKSHVTALLDPPQRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSD--ISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIAL--DQRYHARFSMLIIAFAVTLRAHLQRNIVSTELE-TLLPSWEADQVRMDTCPPALVCMKLTYLINEAVSHNEAR-----------SDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHL 438
BLAST of mRNA_Ecto-sp13_S_contig676.17678.1 vs. uniprot
Match: A0A7S2V5N3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5N3_9STRA) HSP 1 Score: 230 bits (586), Expect = 2.770e-66 Identity = 132/320 (41.25%), Postives = 187/320 (58.44%), Query Frame = 1
Query: 349 RMHEITCRVKTPRRYGSADWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARKIWGGLINQCRNIARLSTVALGPDSPDWLEMKEYL-RLFPFLLKQHLQDERD-DAEMDWSRLPESTVARLQEDPNPPLYCCQIMMEILARACTEGGAAQSPGGRVPHYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRLTDTS 1302
R + + V P+RY S DW N+ ++PKS +L N++ H+ +NTA+A ++ ++ +I D ++P+PH +M+ ALGLLLVFRTNAAY+RFWEARK+WG ++N R+ R++ +A+ D P E L L+PFLLKQHLQ + D D +S L + L D NPPL Q M E+LA + + YR +E ++ +D +G CERI TPVP YSRHTSRFLT+Y TLP VL T VV +CWGLFSIE+I ++IE+PFD + QL L + ++ + L D +
Sbjct: 49 RKNSVMMAVPAPQRYTSQDWAKNLVSIPKSVVLQNVQSHVLWNTAWAAVITFLY-----NIGDLQALTPLPHQLMATALGLLLVFRTNAAYDRFWEARKVWGAVVNTSRDNVRVALIAI--DDPALRERYCQLGMLWPFLLKQHLQCDPDVDEVAAFSTLSREELESLCNDANPPLRVAQRMGEVLALNFQDRDDIMA----------FQYRTYLEGEITKFIDFMGMCERIKLTPVPLSYSRHTSRFLTLYMATLPFVLTKFCGNLTPVVVLGMCWGLFSIEQIGHYIEEPFDKDNAQLPLAGISGNIQKALQALVDAA 351
BLAST of mRNA_Ecto-sp13_S_contig676.17678.1 vs. uniprot
Match: A0A7S0ZJI5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJI5_9RHOD) HSP 1 Score: 209 bits (533), Expect = 3.020e-58 Identity = 121/335 (36.12%), Postives = 187/335 (55.82%), Query Frame = 1
Query: 352 MHEITCRVKTPRRYGSADWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARKIWGGLINQCRNIARLSTVALGP----DSPDWLEMKEYLRLFPFLLKQHLQDERDDAEMDWSRLPESTVARLQEDPNPPLYCCQIMMEILARACTEGGAAQSPGGRVPHYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRLTDTSTVGRCPGAAAPQLP 1344
++ I C ++ P RY S+DWF N+ +LP+S +LY I+ H+F N A + + ++ P+ + HVSP+PH ++ +GLLLVFRTNAAY+RFWEARK+WG L+N+ R+++ + G D +E+ + F L HL+ + + ++D L + V+ ++ N PL+ Q++ +A+A GA +V R +E ++ L+D +G CERIV TPVP YSRHTSRFL+++ TLP++LV P +A + W LFSIEE+ + IE PF L + YA ++ D+ L D + R A P P
Sbjct: 45 VNTIRCAIQRPERYVSSDWFRNLLSLPRSVVLYRIRSHIFTNVAASAGIVAMYNAYPE--LPIWHVSPMPHQLLGTVMGLLLVFRTNAAYDRFWEARKLWGSLVNRTRSMSAATISYFGTNINSDPEGTMEIVLLVVSFVQSLSLHLRGQPLEDQLD-ELLSPAQVSAIKAANNKPLFVAQLLSLRIAKAFENRGARSG--------NTVAERDTLERAVADLIDIMGACERIVKTPVPLSYSRHTSRFLSIWCLTLPILLVEKEGWIVLPGMAFLSWALFSIEEVGHMIEDPFLFHKVSLPIDQYAATIRNDLLGLLDFLPLHRSENAPVPIAP 368
BLAST of mRNA_Ecto-sp13_S_contig676.17678.1 vs. uniprot
Match: A0A0G4EJC8_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJC8_VITBC) HSP 1 Score: 208 bits (529), Expect = 2.970e-57 Identity = 130/315 (41.27%), Postives = 178/315 (56.51%), Query Frame = 1
Query: 385 RRYGSADWFAN----------IQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARKIWGGLINQCRNIARLSTVALGPDSPDWLEMKEYLRLFPFLLKQHLQD-ERDDAEMDWSRLPESTVARLQEDPNPPLYCCQIMMEILARACTEGGAAQSPGGRVPHYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRLTD 1296
RRY S DW + +P SR+L I+ L TA++ ++ + + P+ + L S +PHS+MSGA+GLLLVFRTNAAY+R+WE RK+WG +I+ CR +A S L P + +R FPFL+KQHLQ E D AE+ P A L++ NPPL C++M + C E A + P +++ +E + L +ALG CERI+ TPVP YSRHTSRFLT+Y TLPVVLV + T PVV +CWG +IEEI +FIE PFD QL L + ++ D++ D
Sbjct: 40 RRYTSKDWHTXXXXXXXXLECLTTVPLSRILKRIRGFLLVTTAWSVFITTLFAVAPKLSLFALS-SSLPHSLMSGAMGLLLVFRTNAAYDRYWEGRKLWGKVISTCRELATASLFYL--PIPFQYRLANLIRSFPFLMKQHLQGGEVDMAEVSRWITPNDAEA-LRQVRNPPLLICKLM----SGTCHE--AMEVSRDTKPTERQLIW---LENIIGHLSEALGGCERIMKTPVPLSYSRHTSRFLTLYCLTLPVVLVQSLQWMTIPVVTFMCWGFKAIEEIGHFIEDPFDKASFQLPLKGFCETIQADIEDTMD 341
BLAST of mRNA_Ecto-sp13_S_contig676.17678.1 vs. uniprot
Match: A0A5J4YR29_PORPP (UPF0187 protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YR29_PORPP) HSP 1 Score: 200 bits (509), Expect = 1.160e-54 Identity = 121/328 (36.89%), Postives = 174/328 (53.05%), Query Frame = 1
Query: 346 RRMHEITCRVKTPRRYGSADWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARKIWGGLINQCRNIARLSTVALGP--DSPDWLEMKEYLRL---FPFLLKQHLQDERDDAEMDWSRLPESTVARLQEDPNPPLYCCQIMMEILARACTEGGAAQSPGGRVPHYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPF--DPEYRQLDLVTYATKVKVDVDRLTDTSTV 1308
RR ++ + P RY S DW ++ +PKS +L I+ H+ N AFA V +H + P ID +SP+PH+++ +GLLLVFRTN+AY+RFWE RKIWGG++N+ R++ LGP DSP+ K ++L FP L HL+ E + +P+ N PL C++ +A+A + G M E G++ L+D +G CERIV TPVP YSRHTSRFL+++ TLP + V + P++A V + LFSIEEI + IE PF P +DL A ++ D +TV
Sbjct: 42 RRQSALSMAITRPERYKSTDWIKSLATIPKSSILRRIQSHILANVAFAGIVFALHEMYPN--IDIWSISPLPHTVLGTVMGLLLVFRTNSAYDRFWEGRKIWGGIVNRTRSLGVNYMNYLGPINDSPNPEVSKILIKLDQAFPISLANHLRGELEPNAALEKLIPKQNWQEYVVARNRPLLVCRLQSRYIAQAYA---TREERDGNTNAERETM-----ERGINDLIDYMGMCERIVKTPVPEAYSRHTSRFLSLWCLTLPFIFVKADDWLVMPIMAFVSFALFSIEEIGHLIEDPFIKHPYAPGIDLPLEAMATTINGDLQDMITTV 359 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig676.17678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig676.17678.1 >prot_Ecto-sp13_S_contig676.17678.1 ID=prot_Ecto-sp13_S_contig676.17678.1|Name=mRNA_Ecto-sp13_S_contig676.17678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=564bp LLLKNTPTFNDFNVIGQKSSIQETGGYPSTMSLEATAATMARRKRPRVLAback to top mRNA from alignment at Ecto-sp13_S_contig676:6933..14793- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig676.17678.1 ID=mRNA_Ecto-sp13_S_contig676.17678.1|Name=mRNA_Ecto-sp13_S_contig676.17678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig676:6933..14793- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig676:6933..14793- >mRNA_Ecto-sp13_S_contig676.17678.1 ID=mRNA_Ecto-sp13_S_contig676.17678.1|Name=mRNA_Ecto-sp13_S_contig676.17678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1692bp|location=Sequence derived from alignment at Ecto-sp13_S_contig676:6933..14793- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |