prot_Ecto-sp13_S_contig6757.17675.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6757.17675.1
Unique Nameprot_Ecto-sp13_S_contig6757.17675.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length237
Homology
BLAST of mRNA_Ecto-sp13_S_contig6757.17675.1 vs. uniprot
Match: A0A6H5JRL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL5_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 5.710e-88
Identity = 215/238 (90.34%), Postives = 216/238 (90.76%), Query Frame = 0
Query:    1 MSYYNDGGGHGGAGEXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXX-YNRRPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYSERXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXGG-YNRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGGFERXXXXXXXQGXXXXXXXXXXXXXXXXXGYNKRPGDWDCPSCGYNCFASRMECNRCHTPKPVGGVAPGGGGF 236
            MSYYNDGGGHG    XXXXXXXXXX XXXXXXXXXXXXXXXXXXXX  YNRRPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGY ER XXXX   XXXXXXXXXXXX   XXXXXXXXXX   YNRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGGFER XXXXXX  XXXXXXXXXXXXXXXXX Y+KRPGDWDCPSCGYNCFASRMECNRCHTPKPVGGVAPGGGGF
Sbjct:    1 MSYYNDGGGHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGYNRRPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYGERGXXXXXXXXXXXXXXXXXXXGYSXXXXXXXXXXXXXYNRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGGFERGXXXXXXXXXXXXXXXXXXXXXXXXXXYSKRPGDWDCPSCGYNCFASRMECNRCHTPKPVGGVAPGGGGF 238          
BLAST of mRNA_Ecto-sp13_S_contig6757.17675.1 vs. uniprot
Match: D8LIQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ0_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 5.840e-45
Identity = 169/227 (74.45%), Postives = 173/227 (76.21%), Query Frame = 0
Query:    1 MSYYNDGGGHGGAGEXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXYNRRPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYSERXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGGFERXXXXXXXQGXXXXXXXXXXXXXXXXXGYNKRPGDWDCPSCGYNCFASRMECNRCHTPKPVG 227
            MSYYN+ GG GG G XXXXXXXXX   XXXXXXXXXXXXXXXXXXXX N+RPGDWECPSCGNNCFASR ECNRCQTPKPAGAGG      XXXXXY  XXXXX XXXXXXXXXXXXXXX         R GDW CPSCGN+CFA R  CNRC TP+P G GG    XXXX XX  XXXXXXXXXXXXXXXXX    R GDW CPSCG  CFA R ECNRC TPKP G
Sbjct:    1 MSYYNNDGGGGGYGXXXXXXXXXXR--XXXXXXXXXXXXXXXXXXXXXNKRPGDWECPSCGNNCFASRSECNRCQTPKPAGAGGXXXXYXXXXXXYXXXXXXXYXXXXXXXXXXXXXXX---------REGDWTCPSCGNNCFAFRQECNRCQTPKPGGEGGXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXREGDWTCPSCGNICFAFRNECNRCQTPKPNG 216          
BLAST of mRNA_Ecto-sp13_S_contig6757.17675.1 vs. uniprot
Match: A0A6H5L8L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8L8_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 4.380e-35
Identity = 128/177 (72.32%), Postives = 130/177 (73.45%), Query Frame = 0
Query:   52 PGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYSERXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGGFERXXXXXXXQGXXXXXXXXXXXXXXXXXGYNK-RPGDWDCPSCGYNCFASRMECNRCHTPKPVG 227
            P  WECPSCGNNCFASR ECNRCQTPKPAG         XXXX Y  XXXXXXXXXXXXXXXXXXXXXXXXX     R GDW CPSCGN+CFA R  CNRC TP+P G G     XXXXXXX  XXXXXXXXXXXXXXXXX     R GDW CPSCG NCFA R ECNRC TPKP G
Sbjct:    5 PPGWECPSCGNNCFASRSECNRCQTPKPAGX-------XXXXXGYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREGDWACPSCGNNCFAFRQECNRCQTPKPGGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGDWACPSCGNNCFAFRNECNRCQTPKPSG 174          
BLAST of mRNA_Ecto-sp13_S_contig6757.17675.1 vs. uniprot
Match: A0A2V0NK80_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NK80_9CHLO)

HSP 1 Score: 128 bits (321), Expect = 2.630e-30
Identity = 116/175 (66.29%), Postives = 121/175 (69.14%), Query Frame = 0
Query:   51 RPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYSERXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGGFERXXXXXXXQGXXXXXXXXXXXXXXXXXGYNKRPGDWDCPSCGYNCFASRMECNRCHTPKP 225
            RPGDW CPSCGNNC+A R  CNRC TPKP G  GGG +  XXXX Y  XXXXXXXXXXXXXXXXXXXXXXXX      RPGDW CP CGN+CF  R  CNRC  P+P GAG     XXXXX    X  XXXXXXXXXXXXX     RPGDW C  CG NCFA R  CNRC  P+P
Sbjct:  147 RPGDWPCPSCGNNCYAFRNACNRCGTPKPDG--GGGAAGXXXXXGYGXXXXXXXXXXXXXXXXXXXXXXXXX------RPGDWPCPGCGNNCFGWREACNRCGAPKPPGAGXXXXXXXXXXPGXXXARXXXXXXXXXXXXXA----RPGDWPCSGCGQNCFAWREACNRCGAPRP 309          
BLAST of mRNA_Ecto-sp13_S_contig6757.17675.1 vs. uniprot
Match: A0A8J6C3G0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C3G0_DIALT)

HSP 1 Score: 119 bits (298), Expect = 4.060e-29
Identity = 98/186 (52.69%), Postives = 115/186 (61.83%), Query Frame = 0
Query:   51 RPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYSERXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGGFERXXXXXXXQGXXXXXXXXXXXXXXXXXGYNKRPGDWDCPSCGYNCFASRMECNRCHTPKPVGGVAPGGGGF 236
            RPGDW CP+CG N FAS+  C RCQTPKP   G GG +++     ++G  XXXX                   GG + RPGDW+CP CG + FAS+  C RC  P+P   GGG+  XXXXXXX  XXXXXXXXXXXXXXXXX  + RPGDW CP C  N F+S+  C RC TPKP GG   GGG +
Sbjct:   27 RPGDWSCPTCGANVFASKNSCFRCQTPKP---GMGGDAQQGM---FRGGGXXXXV------------------GGGDVRPGDWNCPGCGANVFASKNSCFRCQAPKP--GGGGYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVRPGDWVCPGCQANVFSSKNSCFRCQTPKPAGG---GGGXY 183          
BLAST of mRNA_Ecto-sp13_S_contig6757.17675.1 vs. uniprot
Match: D7FHH5_ECTSI (Ewing sarcoma breakpoint region 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH5_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.370e-26
Identity = 119/135 (88.15%), Postives = 120/135 (88.89%), Query Frame = 0
Query:    1 MSYYNDGGGHGGAGEXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXX-YNRRPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYSERXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXG-GYNRRPGDW 133
            MSYYNDGGGHGGAGE   XXXXXXX XXXXXXXXXXXXXXXXXXXXX YNRRPGDWECP+CGNNCFASRVECNRCQTPKP GAGG  Y E XXXXX QG  XXXXXXXXXXXXXXXXXXXXXXX  GYNRRPGDW
Sbjct:    1 MSYYNDGGGHGGAGEGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNRRPGDWECPNCGNNCFASRVECNRCQTPKPVGAGGXXYGEXXXXXXXQGGGXXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDW 135          
BLAST of mRNA_Ecto-sp13_S_contig6757.17675.1 vs. uniprot
Match: A0A5J4XE95_9CHLO (RNA-binding cabeza n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XE95_9CHLO)

HSP 1 Score: 110 bits (276), Expect = 1.010e-24
Identity = 84/175 (48.00%), Postives = 92/175 (52.57%), Query Frame = 0
Query:   51 RPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYSERXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGGFERXXXXXXXQGXXXXXXXXXXXXXXXXXGYNKRPGDWDCPSCGYNCFASRMECNRCHTPKP 225
            RPGDW CP C NNCFAS+  C +C  PKPA AG       XXXXX   XXXXXXXXXXX                   RPGDW CP+C N CFAS+  CNRC TP+P GAG     XXXXXXX                        P DW CP CG   +A R  CN+C+TPKP
Sbjct:  180 RPGDWPCPGCNNNCFASKSACPKCGAPKPADAGXXXXXXXXXXXXXXXXXXXXXXXXXXPRPK-------------EARPGDWPCPNCNNICFASKDKCNRCDTPKPPGAGXXXXXXXXXXXXGRVQAAPQGPAGLFA---------PEDWTCPGCGNRNWARRNSCNQCNTPKP 332          
BLAST of mRNA_Ecto-sp13_S_contig6757.17675.1 vs. uniprot
Match: A0A7S2SNJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SNJ9_9STRA)

HSP 1 Score: 102 bits (254), Expect = 7.710e-22
Identity = 68/181 (37.57%), Postives = 74/181 (40.88%), Query Frame = 0
Query:   49 NRRPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYSERXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPS--CGNHCFASRVVCNRCPTPR--PEGAGGGFERXXXXXXXQGXXXXXXXXXXXXXXXXXGYNKRPGDWDCPSCGYNCFASRMECNRCHTPKP 225
            N RPGDW CP C  N FASR EC +C+TPKP GAG            Y G                              R GDW CPS  C  H +ASR  C RC  PR  P   GGG           G                    +RPGDW C SCG NCFASR  C +C+ PKP
Sbjct:  227 NTRPGDWTCPECRANVFASRNECYKCRTPKPPGAG-------ESQPPYSGHTPYNGGYHVPPMGQGPPNGF---------RAGDWLCPSPQCSAHNYASRTTCFRCNGPRGPPAPMGGGGYPPQQFAPYGGNQYQRRPPA-----------ERPGDWKC-SCGANCFASRDRCFKCNAPKP 379          
BLAST of mRNA_Ecto-sp13_S_contig6757.17675.1 vs. uniprot
Match: A0A7S2STL9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STL9_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 6.760e-20
Identity = 68/109 (62.39%), Postives = 76/109 (69.72%), Query Frame = 0
Query:  127 NRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGGFERXXXXXXXQGXXXXXXXXXXXXXXXXXGYNKRPGDWDCPSCGYNCFASRMECNRCHTPKPVGGVAPGGGG 235
            +RR GDWDCPSCG   FAS+  C +C TPRP+G GG       XXXX  XXXXXXXXXXXXXXXXX  ++R GDWDCPSCG +CFASR  C +C TP P  G   GG G
Sbjct:   37 DRRAGDWDCPSCGALVFASKSNCYKCQTPRPDGGGG-----YGXXXXXXXXXXXXXXXXXXXXXXXXXDRRAGDWDCPSCGAHCFASRSTCFKCGTPNPGPGGPDGGYG 140          
BLAST of mRNA_Ecto-sp13_S_contig6757.17675.1 vs. uniprot
Match: A0A7S3FCE1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FCE1_9EUKA)

HSP 1 Score: 95.1 bits (235), Expect = 1.140e-19
Identity = 117/234 (50.00%), Postives = 130/234 (55.56%), Query Frame = 0
Query:   51 RPGDWECPSCGNNCFASRVECNRCQTPKPA--GAGGGGYSERXXXXXYQGXXXXXXXXXXXXXXXXXXXXXXXXXGGY-------------------NRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGGFERXXXXXXXQGXXXXXXXXXXXXXXXXXGY-------------------------------NKRPGDWDCPSCGYNCFASRMECNRCHTPKPVGGVAPG 232
            RPGDW CPSCG N FAS++ C +C+ PKP   G  GG  S+  XXXX   XXXXXXXXXXXXXXXXXXXXXXX    Y                   + RPGDW C SCG + FAS++ C RC  P+P G    +  XXXXXXX  XXXXXXXXXXXXXXXXX                                 N RPGDW CPSCG N FAS+M C +C  PKPV    PG
Sbjct:   14 RPGDWTCPSCGANVFASKLSCFKCRAPKPGTDGGMGGAPSDPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMNPYAGSFGGGXXXXXXXXGQGSDVRPGDWICTSCGANVFASKMSCFRCQAPKPMGGPPSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARPGDWTCPSCGANVFASKMSCFKCQAPKPVQTFNPG 247          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6757.17675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRL5_9PHAE5.710e-8890.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ0_ECTSI5.840e-4574.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8L8_9PHAE4.380e-3572.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V0NK80_9CHLO2.630e-3066.29Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A8J6C3G0_DIALT4.060e-2952.69Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
D7FHH5_ECTSI1.370e-2688.15Ewing sarcoma breakpoint region 1b n=1 Tax=Ectocar... [more]
A0A5J4XE95_9CHLO1.010e-2448.00RNA-binding cabeza n=1 Tax=Trebouxia sp. A1-2 TaxI... [more]
A0A7S2SNJ9_9STRA7.710e-2237.57Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A7S2STL9_9STRA6.760e-2062.39Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3FCE1_9EUKA1.140e-1950.00Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 22..33
score: 42.71
coord: 91..106
score: 50.0
coord: 168..186
score: 40.79
coord: 117..127
score: 44.32
NoneNo IPR availableGENE3D4.10.1060.10coord: 190..231
e-value: 1.1E-11
score: 45.7
NoneNo IPR availableGENE3D4.10.1060.10coord: 123..160
e-value: 4.2E-12
score: 47.1
coord: 45..82
e-value: 5.5E-12
score: 46.7
NoneNo IPR availablePANTHERPTHR23111:SF40T1N15.19coord: 119..226
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 42..161
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 119..226
NoneNo IPR availablePANTHERPTHR23111:SF40T1N15.19coord: 42..161
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 53..77
e-value: 1.1E-6
score: 38.2
coord: 131..155
e-value: 2.6E-5
score: 33.7
coord: 199..223
e-value: 8.1E-7
score: 38.7
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 197..225
e-value: 4.0E-9
score: 35.6
coord: 51..79
e-value: 1.4E-8
score: 33.9
coord: 129..157
e-value: 2.5E-8
score: 33.1
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 51..80
score: 10.76
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 129..158
score: 10.263
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 197..226
score: 10.5
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 189..227
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 44..81
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 121..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6757contigEcto-sp13_S_contig6757:1732..6766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6757.17675.1mRNA_Ecto-sp13_S_contig6757.17675.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6757 1732..6766 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6757.17675.1 ID=prot_Ecto-sp13_S_contig6757.17675.1|Name=mRNA_Ecto-sp13_S_contig6757.17675.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=237bp
MSYYNDGGGHGGAGEGGSSGGGGGGWGGGGGGGWGGGGGGGRGGGGGYNR
RPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYSERGGGGGYQGGG
GGYQGGGGGGYGGGGGYGGGGGGGGYNRRPGDWDCPSCGNHCFASRVVCN
RCPTPRPEGAGGGFERGGGGGGYQGGGGYGGGGGGYGGGGGGGYNKRPGD
WDCPSCGYNCFASRMECNRCHTPKPVGGVAPGGGGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf